RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 TRAV23DV6A0A075B6W5 121 aa10.11□□□□□ -0.79
LTBR-215ENST00000546296 SPRR1AP35321 89 aa10.11□□□□□ -0.79
LTBR-215ENST00000546296 C14orf144Q96I85 54 aa10.11□□□□□ -0.79
LTBR-215ENST00000546296 HIGD2AQ9BW72 106 aa10.11□□□□□ -0.79
LTBR-215ENST00000546296 PPDPFQ9H3Y8 114 aa10.1□□□□□ -0.79
LTBR-215ENST00000546296 HERC1Q15751 4861 aa10.09□□□□□ -0.79
LTBR-215ENST00000546296 KRTAP1-4P0C5Y4 121 aa10.09□□□□□ -0.79
LTBR-215ENST00000546296 KRTAP10-8P60410 259 aa10.09□□□□□ -0.79
LTBR-215ENST00000546296 PRR26Q8N8Z3 221 aa10.09□□□□□ -0.79
LTBR-215ENST00000546296 DLEU1O43261 78 aa10.08□□□□□ -0.8
LTBR-215ENST00000546296 KRTAP4-16G5E9R7 235 aaPredicted RBP10.07□□□□□ -0.8
LTBR-215ENST00000546296 ZNF73O43830 326 aaPredicted RBP10.07□□□□□ -0.8
LTBR-215ENST00000546296 HINT1P49773 126 aaPredicted RBP10.07□□□□□ -0.8
LTBR-215ENST00000546296 PYY3Q5JQD4 70 aa10.07□□□□□ -0.8
LTBR-215ENST00000546296 HIST1H4GQ99525 98 aa10.07□□□□□ -0.8
LTBR-215ENST00000546296 A6NDN8 102 aa10.06□□□□□ -0.8
LTBR-215ENST00000546296 B5MCH6 92 aa10.06□□□□□ -0.8
LTBR-215ENST00000546296 SLC25A34Q6PIV7 304 aa10.06□□□□□ -0.8
LTBR-215ENST00000546296 SMCR5Q8TEV8 140 aa10.05□□□□□ -0.8
LTBR-215ENST00000546296 RPL13AP40429 203 aaKnown RBP10.04□□□□□ -0.8
LTBR-215ENST00000546296 ANAPC11Q9NYG5 84 aa10.04□□□□□ -0.8
LTBR-215ENST00000546296 TRAV13-2A0A0B4J235 113 aa10.03□□□□□ -0.8
LTBR-215ENST00000546296 CRYGAP11844 174 aa10.02□□□□□ -0.81
LTBR-215ENST00000546296 Q6ZRX8 168 aa10.02□□□□□ -0.81
LTBR-215ENST00000546296 ZNF706Q9Y5V0 76 aaPredicted RBP10.02□□□□□ -0.81
LTBR-215ENST00000546296 A4D1N5 150 aa10.01□□□□□ -0.81
LTBR-215ENST00000546296 TNXBP22105 4242 aa10.01□□□□□ -0.81
LTBR-215ENST00000546296 HIGD1BQ9P298 99 aa10□□□□□ -0.81
LTBR-215ENST00000546296 FAM229BQ4G0N7 80 aa9.99□□□□□ -0.81
LTBR-215ENST00000546296 C6orf99Q4VX62 202 aa9.99□□□□□ -0.81
LTBR-215ENST00000546296 SPRR4Q96PI1 79 aa9.99□□□□□ -0.81
LTBR-215ENST00000546296 Q9BRP9 147 aa9.99□□□□□ -0.81
LTBR-215ENST00000546296 A0A087X002 238 aa9.98□□□□□ -0.81
LTBR-215ENST00000546296 COX7BP24311 80 aa9.98□□□□□ -0.81
LTBR-215ENST00000546296 ERC2-IT1O76042 136 aa9.97□□□□□ -0.81
LTBR-215ENST00000546296 C2orf91Q6ZV80 131 aa9.97□□□□□ -0.81
LTBR-215ENST00000546296 TYMSOSQ8TAI1 123 aa9.97□□□□□ -0.81
LTBR-215ENST00000546296 C12orf57Q99622 126 aa9.96□□□□□ -0.82
LTBR-215ENST00000546296 DHRS4-AS1Q9P1J3 65 aa9.95□□□□□ -0.82
LTBR-215ENST00000546296 GAGE2AQ6NT46 116 aa9.94□□□□□ -0.82
LTBR-215ENST00000546296 SMIM11BQ8TCY0 68 aa9.94□□□□□ -0.82
LTBR-215ENST00000546296 TRBV7-6A0A0J9YX20 115 aa9.93□□□□□ -0.82
LTBR-215ENST00000546296 ELOF1P60002 83 aaKnown RBP9.93□□□□□ -0.82
LTBR-215ENST00000546296 TAL2Q16559 108 aa9.93□□□□□ -0.82
LTBR-215ENST00000546296 KRTAP13-2Q52LG2 175 aa9.93□□□□□ -0.82
LTBR-215ENST00000546296 A0A1B0GWB2 263 aa9.91□□□□□ -0.82
LTBR-215ENST00000546296 VAMP3Q15836 100 aa9.91□□□□□ -0.82
LTBR-215ENST00000546296 RAB37Q96AX2 223 aa9.91□□□□□ -0.82
LTBR-215ENST00000546296 CEND1Q8N111 149 aa9.9□□□□□ -0.82
LTBR-215ENST00000546296 UQCR10Q9UDW1 63 aa9.9□□□□□ -0.82
LTBR-215ENST00000546296 CFC1BP0CG36 223 aa9.89□□□□□ -0.83
LTBR-215ENST00000546296 CFC1P0CG37 223 aa9.89□□□□□ -0.83
LTBR-215ENST00000546296 LINC00483Q53H64 154 aa9.89□□□□□ -0.83
LTBR-215ENST00000546296 C3orf22Q8N5N4 141 aa9.89□□□□□ -0.83
LTBR-215ENST00000546296 ST20-AS1Q8NBB2 130 aa9.89□□□□□ -0.83
LTBR-215ENST00000546296 TMEM238LA0A1B0GVL6 79 aa9.88□□□□□ -0.83
LTBR-215ENST00000546296 A6NJY4 79 aa9.88□□□□□ -0.83
LTBR-215ENST00000546296 H7C2G1 150 aa9.87□□□□□ -0.83
LTBR-215ENST00000546296 HSD52Q0P140 79 aa9.86□□□□□ -0.83
LTBR-215ENST00000546296 IGLV9-49A0A0B4J1Y8 123 aa9.85□□□□□ -0.83
LTBR-215ENST00000546296 SLC25A20O43772 301 aa9.85□□□□□ -0.83
LTBR-215ENST00000546296 TSPAN13O95857 204 aa9.85□□□□□ -0.83
LTBR-215ENST00000546296 NHP2Q9NX24 153 aaKnown RBP9.85□□□□□ -0.83
LTBR-215ENST00000546296 A0A0B4J2C4 111 aa9.84□□□□□ -0.83
LTBR-215ENST00000546296 SMIM6P0DI80 62 aa9.84□□□□□ -0.83
LTBR-215ENST00000546296 LINC00304Q8N9R0 145 aa9.84□□□□□ -0.83
LTBR-215ENST00000546296 DEFB105AQ8NG35 78 aa9.84□□□□□ -0.83
LTBR-215ENST00000546296 FXYD2P54710 66 aa9.83□□□□□ -0.84
LTBR-215ENST00000546296 PRO1933Q9H354 126 aa9.83□□□□□ -0.84
LTBR-215ENST00000546296 MOBPQ13875 183 aa9.81□□□□□ -0.84
LTBR-215ENST00000546296 Q1RN00 199 aa9.81□□□□□ -0.84
LTBR-215ENST00000546296 BVES-AS1Q5T3Y7 98 aa9.81□□□□□ -0.84
LTBR-215ENST00000546296 PRO1854Q9UHT4 67 aa9.81□□□□□ -0.84
LTBR-215ENST00000546296 HMCN2Q8NDA2 5059 aa9.81□□□□□ -0.84
LTBR-215ENST00000546296 LOC105371267A0A1B0GV96 52 aa9.8□□□□□ -0.84
LTBR-215ENST00000546296 C4orf48Q5BLP8 95 aa9.8□□□□□ -0.84
LTBR-215ENST00000546296 LINC00575Q6W349 94 aa9.8□□□□□ -0.84
LTBR-215ENST00000546296 Q8NBF4 154 aa9.8□□□□□ -0.84
LTBR-215ENST00000546296 TEX49A0A1B0GTD5 131 aa9.79□□□□□ -0.84
LTBR-215ENST00000546296 SPRR1BP22528 89 aa9.79□□□□□ -0.84
LTBR-215ENST00000546296 C9orf153Q5TBE3 101 aa9.79□□□□□ -0.84
LTBR-215ENST00000546296 hADV29S1A0JD25 119 aa9.78□□□□□ -0.84
LTBR-215ENST00000546296 SSBP3-AS1Q7Z2R9 100 aa9.78□□□□□ -0.84
LTBR-215ENST00000546296 LAMTOR3Q9UHA4 124 aa9.78□□□□□ -0.84
LTBR-215ENST00000546296 SPAG11AQ6PDA7 123 aa9.77□□□□□ -0.85
LTBR-215ENST00000546296 H0YGX0 51 aa9.74□□□□□ -0.85
LTBR-215ENST00000546296 K7ERJ3 54 aa9.74□□□□□ -0.85
LTBR-215ENST00000546296 SNCGO76070 127 aa9.74□□□□□ -0.85
LTBR-215ENST00000546296 IGLV5-48A0A075B6I7 105 aa9.73□□□□□ -0.85
LTBR-215ENST00000546296 PRR4Q16378 134 aa9.73□□□□□ -0.85
LTBR-215ENST00000546296 LINC01547P58512 204 aaPredicted RBP9.72□□□□□ -0.85
LTBR-215ENST00000546296 CTAG1AP78358 180 aa9.72□□□□□ -0.85
LTBR-215ENST00000546296 Q6ZQY7 126 aa9.72□□□□□ -0.85
LTBR-215ENST00000546296 PSMB2P49721 201 aa9.71□□□□□ -0.86
LTBR-215ENST00000546296 TSTD3H0UI37 97 aa9.7□□□□□ -0.86
LTBR-215ENST00000546296 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.7□□□□□ -0.86
LTBR-215ENST00000546296 Q8N377 158 aa9.7□□□□□ -0.86
LTBR-215ENST00000546296 SPINK1P00995 79 aa9.69□□□□□ -0.86
LTBR-215ENST00000546296 SMIM29Q86T20 159 aa9.69□□□□□ -0.86
LTBR-215ENST00000546296 M0R143 59 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms