RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-225	ENST00000545920	IGKV4-1	P06312	121 aa		4.24	□□□□□ -1.73
SNHG1-225	ENST00000545920	DNAH10OS	P0CZ25	163 aa		4.24	□□□□□ -1.73
SNHG1-225	ENST00000545920	HTN3	P15516	51 aa		4.24	□□□□□ -1.73
SNHG1-225	ENST00000545920		Q75L30	129 aa		4.24	□□□□□ -1.73
SNHG1-225	ENST00000545920	OCR1	Q9BZK8	76 aa		4.24	□□□□□ -1.73
SNHG1-225	ENST00000545920	ASH1L	Q9NR48	2969 aa	Known RBP	4.23	□□□□□ -1.73
SNHG1-225	ENST00000545920	MYO18B	Q8IUG5	2567 aa		4.23	□□□□□ -1.73
SNHG1-225	ENST00000545920		A0A0U1RQV1	116 aa		4.23	□□□□□ -1.73
SNHG1-225	ENST00000545920	LCE6A	A0A183	80 aa		4.23	□□□□□ -1.73
SNHG1-225	ENST00000545920	RPL37AP8	A6NKH3	93 aa		4.23	□□□□□ -1.73
SNHG1-225	ENST00000545920		F8WEM9	126 aa		4.23	□□□□□ -1.73
SNHG1-225	ENST00000545920		M0R2N4	97 aa		4.23	□□□□□ -1.73
SNHG1-225	ENST00000545920	DEFB4A	O15263	64 aa		4.23	□□□□□ -1.73
SNHG1-225	ENST00000545920	SPRR1A	P35321	89 aa		4.23	□□□□□ -1.73
SNHG1-225	ENST00000545920	CFAP46	Q8IYW2	2715 aa		4.23	□□□□□ -1.73
SNHG1-225	ENST00000545920	UBR5	O95071	2799 aa	Predicted RBP	4.22	□□□□□ -1.73
SNHG1-225	ENST00000545920	TLN2	Q9Y4G6	2542 aa		4.22	□□□□□ -1.73
SNHG1-225	ENST00000545920	IGSF10	Q6WRI0	2623 aa		4.22	□□□□□ -1.73
SNHG1-225	ENST00000545920		Q6ZRX8	168 aa		4.22	□□□□□ -1.73
SNHG1-225	ENST00000545920		Q8NBF4	154 aa		4.22	□□□□□ -1.73
SNHG1-225	ENST00000545920	SPRR4	Q96PI1	79 aa		4.22	□□□□□ -1.73
SNHG1-225	ENST00000545920	PRO0628	Q9UI54	55 aa		4.22	□□□□□ -1.73
SNHG1-225	ENST00000545920	WNK1	Q9H4A3	2382 aa		4.22	□□□□□ -1.73
SNHG1-225	ENST00000545920	LRRK2	Q5S007	2527 aa		4.22	□□□□□ -1.73
SNHG1-225	ENST00000545920	FLNB	O75369	2602 aa	Known RBP	4.22	□□□□□ -1.73
SNHG1-225	ENST00000545920	SVEP1	Q4LDE5	3571 aa		4.22	□□□□□ -1.73
SNHG1-225	ENST00000545920	ETDC	A0A1B0GVM5	59 aa		4.21	□□□□□ -1.74
SNHG1-225	ENST00000545920		Q6ZRP5	223 aa		4.21	□□□□□ -1.74
SNHG1-225	ENST00000545920	WFDC10B	Q8IUB3	73 aa		4.21	□□□□□ -1.74
SNHG1-225	ENST00000545920		Q8N377	158 aa		4.21	□□□□□ -1.74
SNHG1-225	ENST00000545920	TM2D3	Q9BRN9	247 aa		4.21	□□□□□ -1.74
SNHG1-225	ENST00000545920	PKIG	Q9Y2B9	76 aa		4.21	□□□□□ -1.74
SNHG1-225	ENST00000545920	COL12A1	Q99715	3063 aa		4.2	□□□□□ -1.74
SNHG1-225	ENST00000545920	FBN2	P35556	2912 aa		4.2	□□□□□ -1.74
SNHG1-225	ENST00000545920	IGLV1-50	A0A075B6I6	118 aa		4.2	□□□□□ -1.74
SNHG1-225	ENST00000545920	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.2	□□□□□ -1.74
SNHG1-225	ENST00000545920	C4orf26	Q17RF5	130 aa		4.2	□□□□□ -1.74
SNHG1-225	ENST00000545920	C7orf33	Q8WU49	177 aa		4.2	□□□□□ -1.74
SNHG1-225	ENST00000545920	SNURF	Q9Y675	71 aa		4.2	□□□□□ -1.74
SNHG1-225	ENST00000545920	POLQ	O75417	2590 aa		4.2	□□□□□ -1.74
SNHG1-225	ENST00000545920	TEP1	Q99973	2627 aa	Known RBP	4.2	□□□□□ -1.74
SNHG1-225	ENST00000545920	IGKV2D-24	A0A075B6R9	120 aa		4.19	□□□□□ -1.74
SNHG1-225	ENST00000545920	NDUFB1	O75438	58 aa		4.19	□□□□□ -1.74
SNHG1-225	ENST00000545920	ESRG	Q1W209	222 aa		4.19	□□□□□ -1.74
SNHG1-225	ENST00000545920	C1orf137	Q5JT78	98 aa		4.19	□□□□□ -1.74
SNHG1-225	ENST00000545920	HRCT1	Q6UXD1	115 aa		4.19	□□□□□ -1.74
SNHG1-225	ENST00000545920	MXRA5	Q9NR99	2828 aa		4.19	□□□□□ -1.74
SNHG1-225	ENST00000545920	FLNC	Q14315	2725 aa		4.18	□□□□□ -1.74
SNHG1-225	ENST00000545920	ITPR3	Q14573	2671 aa		4.18	□□□□□ -1.74
SNHG1-225	ENST00000545920	IGLV8-61	A0A075B6I0	122 aa		4.18	□□□□□ -1.74
SNHG1-225	ENST00000545920	DEFB131B	A0A096LNP1	70 aa		4.18	□□□□□ -1.74
SNHG1-225	ENST00000545920		H3BPC8	53 aa		4.18	□□□□□ -1.74
SNHG1-225	ENST00000545920		Q6ZTC4	211 aa		4.18	□□□□□ -1.74
SNHG1-225	ENST00000545920	HIVEP2	P31629	2446 aa		4.18	□□□□□ -1.74
SNHG1-225	ENST00000545920	SCX	Q7RTU7	201 aa		4.17	□□□□□ -1.74
SNHG1-225	ENST00000545920	C11orf45	Q8TAV5	145 aa		4.17	□□□□□ -1.74
SNHG1-225	ENST00000545920	SON	P18583	2426 aa	Known RBP	4.17	□□□□□ -1.74
SNHG1-225	ENST00000545920	EPG5	Q9HCE0	2579 aa		4.17	□□□□□ -1.74
SNHG1-225	ENST00000545920	TEX15	Q9BXT5	2789 aa		4.17	□□□□□ -1.74
SNHG1-225	ENST00000545920	FASN	P49327	2511 aa	Known RBP	4.17	□□□□□ -1.74
SNHG1-225	ENST00000545920	JMJD1C	Q15652	2540 aa		4.17	□□□□□ -1.74
SNHG1-225	ENST00000545920	ZFHX3	Q15911	3703 aa		4.17	□□□□□ -1.74
SNHG1-225	ENST00000545920		A0A1W2PNM2	257 aa		4.16	□□□□□ -1.74
SNHG1-225	ENST00000545920	INAFM1	C9JVW0	142 aa		4.16	□□□□□ -1.74
SNHG1-225	ENST00000545920	FP248	Q71RG6	208 aa	Predicted RBP	4.16	□□□□□ -1.74
SNHG1-225	ENST00000545920	MRPL55	Q7Z7F7	128 aa	Known RBP	4.16	□□□□□ -1.74
SNHG1-225	ENST00000545920	ZAN	Q9Y493	2812 aa		4.16	□□□□□ -1.74
SNHG1-225	ENST00000545920	ABCA12	Q86UK0	2595 aa		4.15	□□□□□ -1.74
SNHG1-225	ENST00000545920	UTP20	O75691	2785 aa	Known RBP	4.15	□□□□□ -1.74
SNHG1-225	ENST00000545920	C3orf84	H3BNL1	204 aa		4.15	□□□□□ -1.75
SNHG1-225	ENST00000545920	REG3G	Q6UW15	175 aa		4.15	□□□□□ -1.75
SNHG1-225	ENST00000545920	ZCCHC13	Q8WW36	166 aa	Known RBP	4.15	□□□□□ -1.75
SNHG1-225	ENST00000545920		Q9BRP9	147 aa		4.15	□□□□□ -1.75
SNHG1-225	ENST00000545920	CYP4F30P	Q9H0H9	118 aa		4.15	□□□□□ -1.75
SNHG1-225	ENST00000545920		V9GYY9	64 aa		4.15	□□□□□ -1.75
SNHG1-225	ENST00000545920		H0Y9J4	135 aa		4.14	□□□□□ -1.75
SNHG1-225	ENST00000545920	C14orf177	Q52M58	125 aa		4.14	□□□□□ -1.75
SNHG1-225	ENST00000545920	SMR3A	Q99954	134 aa		4.14	□□□□□ -1.75
SNHG1-225	ENST00000545920	VPS13C	Q709C8	3753 aa		4.14	□□□□□ -1.75
SNHG1-225	ENST00000545920	AKAP9	Q99996	3911 aa		4.14	□□□□□ -1.75
SNHG1-225	ENST00000545920	CCDC168	Q8NDH2	2452 aa		4.13	□□□□□ -1.75
SNHG1-225	ENST00000545920	IGLV5-52	A0A0A0MRZ9	124 aa		4.13	□□□□□ -1.75
SNHG1-225	ENST00000545920	HCG22	E2RYF7	251 aa		4.13	□□□□□ -1.75
SNHG1-225	ENST00000545920	CNBP	P62633	177 aa	Known RBP	4.13	□□□□□ -1.75
SNHG1-225	ENST00000545920	SMIM29	Q86T20	159 aa		4.13	□□□□□ -1.75
SNHG1-225	ENST00000545920	PRR26	Q8N8Z3	221 aa		4.13	□□□□□ -1.75
SNHG1-225	ENST00000545920	DEFB105A	Q8NG35	78 aa		4.13	□□□□□ -1.75
SNHG1-225	ENST00000545920	FN1	P02751	2386 aa	Known RBP	4.13	□□□□□ -1.75
SNHG1-225	ENST00000545920	FLNA	P21333	2647 aa	Known RBP	4.12	□□□□□ -1.75
SNHG1-225	ENST00000545920	APC	P25054	2843 aa		4.12	□□□□□ -1.75
SNHG1-225	ENST00000545920	hDV103S1	A0JD37	113 aa		4.12	□□□□□ -1.75
SNHG1-225	ENST00000545920	C16orf90	A8MZG2	172 aa		4.12	□□□□□ -1.75
SNHG1-225	ENST00000545920	SPRR1B	P22528	89 aa		4.12	□□□□□ -1.75
SNHG1-225	ENST00000545920	MP68	P56378	58 aa		4.12	□□□□□ -1.75
SNHG1-225	ENST00000545920	DSCR10	P59022	87 aa		4.12	□□□□□ -1.75
SNHG1-225	ENST00000545920	UBE2B	P63146	152 aa		4.12	□□□□□ -1.75
SNHG1-225	ENST00000545920		Q1T7F1	81 aa		4.12	□□□□□ -1.75
SNHG1-225	ENST00000545920		Q8N9L7	120 aa		4.12	□□□□□ -1.75
SNHG1-225	ENST00000545920	SPANXA2-OT1	Q8N9U9	137 aa		4.12	□□□□□ -1.75
SNHG1-225	ENST00000545920	LINC00588	Q9Y4M8	146 aa		4.12	□□□□□ -1.75

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