RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 BOD1L2Q8IYS8 172 aa4.51□□□□□ -1.69
SNHG1-223ENST00000545440 TYMSOSQ8TAI1 123 aa4.51□□□□□ -1.69
SNHG1-223ENST00000545440 LOC107984156A0A0G2JMH3 177 aa4.5□□□□□ -1.69
SNHG1-223ENST00000545440 J3QQQ9 107 aa4.5□□□□□ -1.69
SNHG1-223ENST00000545440 IGKCP01834 107 aa4.5□□□□□ -1.69
SNHG1-223ENST00000545440 FABP4P15090 132 aa4.5□□□□□ -1.69
SNHG1-223ENST00000545440 ARL17AQ8IVW1 177 aa4.5□□□□□ -1.69
SNHG1-223ENST00000545440 NCR3O14931 201 aa4.49□□□□□ -1.69
SNHG1-223ENST00000545440 HIST1H2BKO60814 126 aa4.49□□□□□ -1.69
SNHG1-223ENST00000545440 HIST1H2BJP06899 126 aa4.49□□□□□ -1.69
SNHG1-223ENST00000545440 LGALS3P17931 250 aaKnown RBP4.49□□□□□ -1.69
SNHG1-223ENST00000545440 HIST1H2BOP23527 126 aa4.49□□□□□ -1.69
SNHG1-223ENST00000545440 HIST1H2BBP33778 126 aa4.49□□□□□ -1.69
SNHG1-223ENST00000545440 SPRR1AP35321 89 aa4.49□□□□□ -1.69
SNHG1-223ENST00000545440 HIST1H2BDP58876 126 aa4.49□□□□□ -1.69
SNHG1-223ENST00000545440 HIST1H2BCP62807 126 aa4.49□□□□□ -1.69
SNHG1-223ENST00000545440 HIST2H2BEQ16778 126 aa4.49□□□□□ -1.69
SNHG1-223ENST00000545440 KRTAP13-2Q52LG2 175 aa4.49□□□□□ -1.69
SNHG1-223ENST00000545440 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-223ENST00000545440 LINC00337Q8N6G1 96 aa4.49□□□□□ -1.69
SNHG1-223ENST00000545440 HIST1H2BHQ93079 126 aa4.49□□□□□ -1.69
SNHG1-223ENST00000545440 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
SNHG1-223ENST00000545440 HIST1H2BNQ99877 126 aa4.49□□□□□ -1.69
SNHG1-223ENST00000545440 HIST1H2BMQ99879 126 aa4.49□□□□□ -1.69
SNHG1-223ENST00000545440 PMCHL2Q9BQD1 86 aa4.49□□□□□ -1.69
SNHG1-223ENST00000545440 KCNQ1DNQ9H478 68 aa4.49□□□□□ -1.69
SNHG1-223ENST00000545440 LPAP08519 4548 aa4.48□□□□□ -1.69
SNHG1-223ENST00000545440 IGLV7-46A0A075B6I9 117 aa4.48□□□□□ -1.69
SNHG1-223ENST00000545440 S100A12P80511 92 aa4.48□□□□□ -1.69
SNHG1-223ENST00000545440 MIEN1Q9BRT3 115 aa4.48□□□□□ -1.69
SNHG1-223ENST00000545440 HIGD2AQ9BW72 106 aa4.48□□□□□ -1.69
SNHG1-223ENST00000545440 ANAPC11Q9NYG5 84 aa4.48□□□□□ -1.69
SNHG1-223ENST00000545440 ZNF706Q9Y5V0 76 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-223ENST00000545440 TRBV10-3A0A0K0K1G6 114 aa4.47□□□□□ -1.69
SNHG1-223ENST00000545440 TRBV10-2A0A0K0K1G8 114 aa4.47□□□□□ -1.69
SNHG1-223ENST00000545440 E9PLD3 99 aa4.47□□□□□ -1.69
SNHG1-223ENST00000545440 KRTAP4-16G5E9R7 235 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-223ENST00000545440 SYS1-DBNDD2H3BUS1 97 aa4.47□□□□□ -1.69
SNHG1-223ENST00000545440 CTAG1AP78358 180 aa4.47□□□□□ -1.69
SNHG1-223ENST00000545440 PRR4Q16378 134 aa4.47□□□□□ -1.69
SNHG1-223ENST00000545440 ADAMTSL4-AS1Q5T5F5 129 aa4.47□□□□□ -1.69
SNHG1-223ENST00000545440 DAND5Q8N907 189 aa4.47□□□□□ -1.69
SNHG1-223ENST00000545440 LINC00304Q8N9R0 145 aa4.47□□□□□ -1.69
SNHG1-223ENST00000545440 LITAFQ99732 161 aa4.47□□□□□ -1.69
SNHG1-223ENST00000545440 SPANXB1Q9NS25 103 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-223ENST00000545440 ETDCA0A1B0GVM5 59 aa4.46□□□□□ -1.7
SNHG1-223ENST00000545440 NDUFC2O95298 119 aa4.46□□□□□ -1.7
SNHG1-223ENST00000545440 TSPAN13O95857 204 aa4.46□□□□□ -1.7
SNHG1-223ENST00000545440 LINC01545Q5VT33 79 aa4.46□□□□□ -1.7
SNHG1-223ENST00000545440 SPRR4Q96PI1 79 aa4.46□□□□□ -1.7
SNHG1-223ENST00000545440 A0A0J9YXY3 114 aa4.45□□□□□ -1.7
SNHG1-223ENST00000545440 DDTP30046 118 aa4.45□□□□□ -1.7
SNHG1-223ENST00000545440 IGLV6-57P01721 117 aa4.44□□□□□ -1.7
SNHG1-223ENST00000545440 CFC1BP0CG36 223 aa4.44□□□□□ -1.7
SNHG1-223ENST00000545440 CFC1P0CG37 223 aa4.44□□□□□ -1.7
SNHG1-223ENST00000545440 COA6Q5JTJ3 125 aaKnown RBP4.44□□□□□ -1.7
SNHG1-223ENST00000545440 Q6ZRX8 168 aa4.44□□□□□ -1.7
SNHG1-223ENST00000545440 SMCR5Q8TEV8 140 aa4.44□□□□□ -1.7
SNHG1-223ENST00000545440 TIMM17BO60830 172 aa4.43□□□□□ -1.7
SNHG1-223ENST00000545440 LINC00483Q53H64 154 aa4.43□□□□□ -1.7
SNHG1-223ENST00000545440 S100A7L2Q5SY68 101 aa4.43□□□□□ -1.7
SNHG1-223ENST00000545440 SPAG11AQ6PDA7 123 aa4.43□□□□□ -1.7
SNHG1-223ENST00000545440 SOSTDC1Q6X4U4 206 aa4.43□□□□□ -1.7
SNHG1-223ENST00000545440 C3orf22Q8N5N4 141 aa4.43□□□□□ -1.7
SNHG1-223ENST00000545440 TRAV23DV6A0A075B6W5 121 aa4.42□□□□□ -1.7
SNHG1-223ENST00000545440 CBY1Q9Y3M2 126 aa4.42□□□□□ -1.7
SNHG1-223ENST00000545440 RNF213Q63HN8 5207 aa4.41□□□□□ -1.7
SNHG1-223ENST00000545440 ZNF815PA8K554 130 aa4.41□□□□□ -1.7
SNHG1-223ENST00000545440 C3orf79P0CE67 100 aa4.41□□□□□ -1.7
SNHG1-223ENST00000545440 NPC2P61916 151 aa4.41□□□□□ -1.7
SNHG1-223ENST00000545440 JOSD1Q15040 202 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-223ENST00000545440 RETNLBQ9BQ08 111 aa4.41□□□□□ -1.7
SNHG1-223ENST00000545440 Q9BRP9 147 aa4.41□□□□□ -1.7
SNHG1-223ENST00000545440 SPANXCQ9NY87 97 aa4.41□□□□□ -1.7
SNHG1-223ENST00000545440 C20orf202A1L168 122 aa4.4□□□□□ -1.71
SNHG1-223ENST00000545440 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
SNHG1-223ENST00000545440 ZNF73O43830 326 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-223ENST00000545440 KRTDAPP60985 99 aa4.4□□□□□ -1.71
SNHG1-223ENST00000545440 TPRXLQ17RH7 258 aa4.4□□□□□ -1.71
SNHG1-223ENST00000545440 Q8NBF4 154 aa4.4□□□□□ -1.71
SNHG1-223ENST00000545440 LINC00308Q8TCZ7 52 aa4.4□□□□□ -1.71
SNHG1-223ENST00000545440 ERC2-IT1O76042 136 aa4.39□□□□□ -1.71
SNHG1-223ENST00000545440 AKR1D1P51857 326 aa4.39□□□□□ -1.71
SNHG1-223ENST00000545440 Q6ZVQ6 151 aa4.39□□□□□ -1.71
SNHG1-223ENST00000545440 NOTCH2NLQ7Z3S9 236 aa4.39□□□□□ -1.71
SNHG1-223ENST00000545440 SPANXDQ9BXN6 97 aa4.39□□□□□ -1.71
SNHG1-223ENST00000545440 PPDPFQ9H3Y8 114 aa4.39□□□□□ -1.71
SNHG1-223ENST00000545440 SPINK1P00995 79 aa4.38□□□□□ -1.71
SNHG1-223ENST00000545440 RPS29P62273 56 aaKnown RBP4.38□□□□□ -1.71
SNHG1-223ENST00000545440 FP248Q71RG6 208 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-223ENST00000545440 TTTY13Q9BZ97 58 aa4.38□□□□□ -1.71
SNHG1-223ENST00000545440 HINT1P49773 126 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-223ENST00000545440 MOBPQ13875 183 aa4.37□□□□□ -1.71
SNHG1-223ENST00000545440 SCGB1D4Q6XE38 83 aa4.37□□□□□ -1.71
SNHG1-223ENST00000545440 COPS9Q8WXC6 57 aa4.37□□□□□ -1.71
SNHG1-223ENST00000545440 Q6ZVH6 145 aa4.36□□□□□ -1.71
SNHG1-223ENST00000545440 SSBP3-AS1Q7Z2R9 100 aa4.36□□□□□ -1.71
SNHG1-223ENST00000545440 LINC00518Q8N0U6 118 aa4.36□□□□□ -1.71
SNHG1-223ENST00000545440 IFITM1P13164 125 aa4.35□□□□□ -1.71
SNHG1-223ENST00000545440 ATOH7Q8N100 152 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms