RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 M0R378 163 aa6.91□□□□□ -1.3
GABPB1-206ENST00000543881 TMEM126AQ9H061 195 aa6.91□□□□□ -1.3
GABPB1-206ENST00000543881 RPL24P83731 157 aaKnown RBP6.89□□□□□ -1.31
GABPB1-206ENST00000543881 FAM229BQ4G0N7 80 aa6.89□□□□□ -1.31
GABPB1-206ENST00000543881 FAM19A1Q7Z5A9 133 aa6.89□□□□□ -1.31
GABPB1-206ENST00000543881 BOD1L2Q8IYS8 172 aa6.88□□□□□ -1.31
GABPB1-206ENST00000543881 TMEM223A0PJW6 202 aa6.87□□□□□ -1.31
GABPB1-206ENST00000543881 F8W1H4 67 aa6.87□□□□□ -1.31
GABPB1-206ENST00000543881 HERV-K104P63124 156 aa6.87□□□□□ -1.31
GABPB1-206ENST00000543881 A0A0U1RRA0 63 aa6.86□□□□□ -1.31
GABPB1-206ENST00000543881 LINC00158P58513 81 aa6.86□□□□□ -1.31
GABPB1-206ENST00000543881 SFTA2Q6UW10 78 aa6.86□□□□□ -1.31
GABPB1-206ENST00000543881 PLEKHB2Q96CS7 222 aa6.86□□□□□ -1.31
GABPB1-206ENST00000543881 RETNLBQ9BQ08 111 aa6.86□□□□□ -1.31
GABPB1-206ENST00000543881 CDIP1Q9H305 208 aa6.86□□□□□ -1.31
GABPB1-206ENST00000543881 TRAV12-1A0A0B4J245 112 aa6.85□□□□□ -1.31
GABPB1-206ENST00000543881 A0A1W2PPM0 123 aa6.85□□□□□ -1.31
GABPB1-206ENST00000543881 COX8AP10176 69 aa6.85□□□□□ -1.31
GABPB1-206ENST00000543881 LINC00304Q8N9R0 145 aa6.85□□□□□ -1.31
GABPB1-206ENST00000543881 IFI27L1Q96BM0 104 aa6.85□□□□□ -1.31
GABPB1-206ENST00000543881 IGKV2D-26A0A0A0MRZ7 120 aa6.85□□□□□ -1.31
GABPB1-206ENST00000543881 CHCHD1Q96BP2 118 aaKnown RBP6.85□□□□□ -1.31
GABPB1-206ENST00000543881 SMIM13P0DJ93 91 aa6.84□□□□□ -1.31
GABPB1-206ENST00000543881 TPRXLQ17RH7 258 aa6.84□□□□□ -1.31
GABPB1-206ENST00000543881 C3orf22Q8N5N4 141 aa6.84□□□□□ -1.31
GABPB1-206ENST00000543881 MUC17Q685J3 4493 aa6.84□□□□□ -1.31
GABPB1-206ENST00000543881 FABP2P12104 132 aa6.83□□□□□ -1.32
GABPB1-206ENST00000543881 C2orf91Q6ZV80 131 aa6.83□□□□□ -1.32
GABPB1-206ENST00000543881 FAM19A2Q8N3H0 131 aa6.83□□□□□ -1.32
GABPB1-206ENST00000543881 HIGD2AQ9BW72 106 aa6.83□□□□□ -1.32
GABPB1-206ENST00000543881 SPANXB1Q9NS25 103 aaPredicted RBP6.83□□□□□ -1.32
GABPB1-206ENST00000543881 SPCS1Q9Y6A9 102 aa6.83□□□□□ -1.32
GABPB1-206ENST00000543881 FSIP2Q5CZC0 6907 aa6.82□□□□□ -1.32
GABPB1-206ENST00000543881 HSBP1O75506 76 aa6.82□□□□□ -1.32
GABPB1-206ENST00000543881 C5orf47Q569G3 176 aa6.82□□□□□ -1.32
GABPB1-206ENST00000543881 CRCT1Q9UGL9 99 aa6.82□□□□□ -1.32
GABPB1-206ENST00000543881 HSPB8Q9UJY1 196 aa6.82□□□□□ -1.32
GABPB1-206ENST00000543881 MIR7-3HGQ8N6C7 128 aa6.81□□□□□ -1.32
GABPB1-206ENST00000543881 SPRR4Q96PI1 79 aa6.81□□□□□ -1.32
GABPB1-206ENST00000543881 IGLV7-46A0A075B6I9 117 aa6.8□□□□□ -1.32
GABPB1-206ENST00000543881 SYS1-DBNDD2H3BUS1 97 aa6.8□□□□□ -1.32
GABPB1-206ENST00000543881 NCR3O14931 201 aa6.8□□□□□ -1.32
GABPB1-206ENST00000543881 MEIG1Q5JSS6 88 aa6.8□□□□□ -1.32
GABPB1-206ENST00000543881 H3BUT2 72 aa6.79□□□□□ -1.32
GABPB1-206ENST00000543881 SPRR1AP35321 89 aa6.79□□□□□ -1.32
GABPB1-206ENST00000543881 TSPEAR-AS2P59090 65 aa6.79□□□□□ -1.32
GABPB1-206ENST00000543881 LINC01545Q5VT33 79 aa6.79□□□□□ -1.32
GABPB1-206ENST00000543881 SPANXCQ9NY87 97 aa6.79□□□□□ -1.32
GABPB1-206ENST00000543881 SS18L2Q9UHA2 77 aa6.79□□□□□ -1.32
GABPB1-206ENST00000543881 KRTAP4-16G5E9R7 235 aaPredicted RBP6.79□□□□□ -1.32
GABPB1-206ENST00000543881 PRYO14603 147 aa6.79□□□□□ -1.32
GABPB1-206ENST00000543881 Q6Q795 121 aa6.79□□□□□ -1.32
GABPB1-206ENST00000543881 NDUFA12Q9UI09 145 aa6.79□□□□□ -1.32
GABPB1-206ENST00000543881 ATOH7Q8N100 152 aa6.78□□□□□ -1.32
GABPB1-206ENST00000543881 KCNQ1DNQ9H478 68 aa6.78□□□□□ -1.32
GABPB1-206ENST00000543881 HIGD1BQ9P298 99 aa6.78□□□□□ -1.32
GABPB1-206ENST00000543881 LINC00337Q8N6G1 96 aa6.77□□□□□ -1.33
GABPB1-206ENST00000543881 TRBV10-3A0A0K0K1G6 114 aa6.76□□□□□ -1.33
GABPB1-206ENST00000543881 MYMXA0A1B0GTQ4 84 aa6.76□□□□□ -1.33
GABPB1-206ENST00000543881 LINC01547P58512 204 aaPredicted RBP6.76□□□□□ -1.33
GABPB1-206ENST00000543881 SMCR5Q8TEV8 140 aa6.76□□□□□ -1.33
GABPB1-206ENST00000543881 ANAPC13Q9BS18 74 aa6.76□□□□□ -1.33
GABPB1-206ENST00000543881 DAND5Q8N907 189 aa6.75□□□□□ -1.33
GABPB1-206ENST00000543881 MAP1LC3CQ9BXW4 147 aa6.75□□□□□ -1.33
GABPB1-206ENST00000543881 PPDPFQ9H3Y8 114 aa6.75□□□□□ -1.33
GABPB1-206ENST00000543881 E9PLD3 99 aa6.74□□□□□ -1.33
GABPB1-206ENST00000543881 H3BMG7 143 aa6.74□□□□□ -1.33
GABPB1-206ENST00000543881 LEPROTO15243 131 aa6.74□□□□□ -1.33
GABPB1-206ENST00000543881 LEPROTL1O95214 131 aa6.74□□□□□ -1.33
GABPB1-206ENST00000543881 SPAG11AQ6PDA7 123 aa6.74□□□□□ -1.33
GABPB1-206ENST00000543881 SMIM20Q8N5G0 67 aa6.74□□□□□ -1.33
GABPB1-206ENST00000543881 ZNF706Q9Y5V0 76 aaPredicted RBP6.74□□□□□ -1.33
GABPB1-206ENST00000543881 LOC107984156A0A0G2JMH3 177 aa6.73□□□□□ -1.33
GABPB1-206ENST00000543881 ETDCA0A1B0GVM5 59 aa6.73□□□□□ -1.33
GABPB1-206ENST00000543881 ARL17AQ8IVW1 177 aa6.73□□□□□ -1.33
GABPB1-206ENST00000543881 SPANXDQ9BXN6 97 aa6.73□□□□□ -1.33
GABPB1-206ENST00000543881 PRO0461Q9UI25 63 aa6.73□□□□□ -1.33
GABPB1-206ENST00000543881 B5MCH6 92 aa6.73□□□□□ -1.33
GABPB1-206ENST00000543881 ERC2-IT1O76042 136 aa6.73□□□□□ -1.33
GABPB1-206ENST00000543881 TAL2Q16559 108 aa6.73□□□□□ -1.33
GABPB1-206ENST00000543881 Q8NBF4 154 aa6.73□□□□□ -1.33
GABPB1-206ENST00000543881 J3QQQ9 107 aa6.72□□□□□ -1.33
GABPB1-206ENST00000543881 PLNP26678 52 aa6.72□□□□□ -1.33
GABPB1-206ENST00000543881 LINC00483Q53H64 154 aa6.72□□□□□ -1.33
GABPB1-206ENST00000543881 TRBV10-2A0A0K0K1G8 114 aa6.7□□□□□ -1.34
GABPB1-206ENST00000543881 EIF4EBP3O60516 100 aaPredicted RBP6.7□□□□□ -1.34
GABPB1-206ENST00000543881 DPM2O94777 84 aa6.7□□□□□ -1.34
GABPB1-206ENST00000543881 GAGE2AQ6NT46 116 aa6.7□□□□□ -1.34
GABPB1-206ENST00000543881 Q9BRP9 147 aa6.7□□□□□ -1.34
GABPB1-206ENST00000543881 IGKCP01834 107 aa6.69□□□□□ -1.34
GABPB1-206ENST00000543881 ASB16-AS1Q495Z4 193 aa6.69□□□□□ -1.34
GABPB1-206ENST00000543881 SOSTDC1Q6X4U4 206 aa6.69□□□□□ -1.34
GABPB1-206ENST00000543881 A4D1N5 150 aa6.68□□□□□ -1.34
GABPB1-206ENST00000543881 IGLV6-57P01721 117 aa6.68□□□□□ -1.34
GABPB1-206ENST00000543881 NMUP48645 174 aa6.68□□□□□ -1.34
GABPB1-206ENST00000543881 HERVK_113P61574 105 aa6.68□□□□□ -1.34
GABPB1-206ENST00000543881 FP248Q71RG6 208 aaPredicted RBP6.68□□□□□ -1.34
GABPB1-206ENST00000543881 KRTAP4-1Q9BYQ7 146 aa6.68□□□□□ -1.34
GABPB1-206ENST00000543881 A0A1B0GWB2 263 aa6.67□□□□□ -1.34
GABPB1-206ENST00000543881 NDUFC2O95298 119 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms