RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 FUSP35637 526 aaKnown RBP eCLIP15.59■□□□□ 0.09
SHD-201ENST00000543264 PDZD2O15018 2839 aa15.58■□□□□ 0.08
SHD-201ENST00000543264 Q6ZRP5 223 aa15.58■□□□□ 0.08
SHD-201ENST00000543264 HECTD1Q9ULT8 2610 aa15.57■□□□□ 0.08
SHD-201ENST00000543264 C15orf56Q8N910 161 aa15.57■□□□□ 0.08
SHD-201ENST00000543264 BRK1Q8WUW1 75 aa15.57■□□□□ 0.08
SHD-201ENST00000543264 PKIGQ9Y2B9 76 aa15.56■□□□□ 0.08
SHD-201ENST00000543264 KRTAP26-1Q6PEX3 210 aa15.56■□□□□ 0.08
SHD-201ENST00000543264 Q8N377 158 aa15.55■□□□□ 0.08
SHD-201ENST00000543264 UNC79Q9P2D8 2635 aa15.54■□□□□ 0.08
SHD-201ENST00000543264 SMR3AQ99954 134 aa15.53■□□□□ 0.08
SHD-201ENST00000543264 FAM30AQ9NZY2 134 aa15.53■□□□□ 0.08
SHD-201ENST00000543264 J3QKU1 62 aa15.53■□□□□ 0.08
SHD-201ENST00000543264 Q6ZTC4 211 aa15.53■□□□□ 0.08
SHD-201ENST00000543264 HIVEP1P15822 2718 aa15.53■□□□□ 0.08
SHD-201ENST00000543264 KPRPQ5T749 579 aaPredicted RBP15.52■□□□□ 0.07
SHD-201ENST00000543264 SMIM29Q86T20 159 aa15.51■□□□□ 0.07
SHD-201ENST00000543264 NKAPP1Q8N9T2 125 aa15.5■□□□□ 0.07
SHD-201ENST00000543264 ESRGQ1W209 222 aa15.49■□□□□ 0.07
SHD-201ENST00000543264 IGLV5-48A0A075B6I7 105 aa15.47■□□□□ 0.07
SHD-201ENST00000543264 KCNQ1DNQ9H478 68 aa15.47■□□□□ 0.07
SHD-201ENST00000543264 SERTAD4-AS1Q5TG53 156 aa15.47■□□□□ 0.07
SHD-201ENST00000543264 NOTCH2Q04721 2471 aa15.46■□□□□ 0.07
SHD-201ENST00000543264 C7orf33Q8WU49 177 aa15.46■□□□□ 0.07
SHD-201ENST00000543264 TENM1Q9UKZ4 2725 aa15.45■□□□□ 0.06
SHD-201ENST00000543264 A0A1W2PNM2 257 aa15.44■□□□□ 0.06
SHD-201ENST00000543264 IGKV2D-24A0A075B6R9 120 aa15.44■□□□□ 0.06
SHD-201ENST00000543264 SYCNQ0VAF6 134 aa15.44■□□□□ 0.06
SHD-201ENST00000543264 PKD1L1Q8TDX9 2849 aa15.43■□□□□ 0.06
SHD-201ENST00000543264 RPL37AP8A6NKH3 93 aa15.41■□□□□ 0.06
SHD-201ENST00000543264 C1orf137Q5JT78 98 aa15.4■□□□□ 0.06
SHD-201ENST00000543264 LRCOL1A6NCL2 159 aa15.38■□□□□ 0.05
SHD-201ENST00000543264 ST20-AS1Q8NBB2 130 aa15.38■□□□□ 0.05
SHD-201ENST00000543264 Q9BRP9 147 aa15.37■□□□□ 0.05
SHD-201ENST00000543264 TRRAPQ9Y4A5 3859 aa15.36■□□□□ 0.05
SHD-201ENST00000543264 DHRS4-AS1Q9P1J3 65 aa15.36■□□□□ 0.05
SHD-201ENST00000543264 Q6ZRX8 168 aa15.36■□□□□ 0.05
SHD-201ENST00000543264 RETNQ9HD89 108 aa15.35■□□□□ 0.05
SHD-201ENST00000543264 Q8NBF4 154 aa15.33■□□□□ 0.04
SHD-201ENST00000543264 ETDCA0A1B0GVM5 59 aa15.32■□□□□ 0.04
SHD-201ENST00000543264 FAM168BA1KXE4 195 aa15.32■□□□□ 0.04
SHD-201ENST00000543264 ATRQ13535 2644 aa15.32■□□□□ 0.04
SHD-201ENST00000543264 A0A1B0GW54 56 aa15.32■□□□□ 0.04
SHD-201ENST00000543264 hDV103S1A0JD37 113 aa15.32■□□□□ 0.04
SHD-201ENST00000543264 DSCR10P59022 87 aa15.31■□□□□ 0.04
SHD-201ENST00000543264 TNP2Q05952 138 aa15.31■□□□□ 0.04
SHD-201ENST00000543264 LCE6AA0A183 80 aa15.31■□□□□ 0.04
SHD-201ENST00000543264 H3BNG1 76 aa15.31■□□□□ 0.04
SHD-201ENST00000543264 K7EQZ3 153 aa15.31■□□□□ 0.04
SHD-201ENST00000543264 TEP1Q99973 2627 aaKnown RBP15.29■□□□□ 0.04
SHD-201ENST00000543264 KRTAP4-16G5E9R7 235 aaPredicted RBP15.29■□□□□ 0.04
SHD-201ENST00000543264 C1orf64Q8NEQ6 169 aa15.29■□□□□ 0.04
SHD-201ENST00000543264 F8WDY8 70 aa15.28■□□□□ 0.04
SHD-201ENST00000543264 C1orf195Q5TG92 126 aa15.28■□□□□ 0.04
SHD-201ENST00000543264 IGLV1-50A0A075B6I6 118 aa15.27■□□□□ 0.03
SHD-201ENST00000543264 SPRR4Q96PI1 79 aa15.26■□□□□ 0.03
SHD-201ENST00000543264 LINC01556Q5JQF7 62 aa15.26■□□□□ 0.03
SHD-201ENST00000543264 ZCCHC13Q8WW36 166 aaKnown RBP15.25■□□□□ 0.03
SHD-201ENST00000543264 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.24■□□□□ 0.03
SHD-201ENST00000543264 PRR4Q16378 134 aa15.24■□□□□ 0.03
SHD-201ENST00000543264 UBE2BP63146 152 aa15.22■□□□□ 0.03
SHD-201ENST00000543264 F8P00451 2351 aa15.22■□□□□ 0.03
SHD-201ENST00000543264 SPRR1AP35321 89 aa15.21■□□□□ 0.03
SHD-201ENST00000543264 A0A0G2JQZ4 141 aa15.21■□□□□ 0.02
SHD-201ENST00000543264 A0A1W2PNN7 141 aa15.21■□□□□ 0.02
SHD-201ENST00000543264 PLA2G2DQ9UNK4 145 aa15.21■□□□□ 0.02
SHD-201ENST00000543264 OTOGQ6ZRI0 2925 aa15.19■□□□□ 0.02
SHD-201ENST00000543264 TLX1NBP0CAT3 122 aa15.19■□□□□ 0.02
SHD-201ENST00000543264 KRTAP7-1Q8IUC3 87 aa15.19■□□□□ 0.02
SHD-201ENST00000543264 HCG22E2RYF7 251 aa15.18■□□□□ 0.02
SHD-201ENST00000543264 DEFB116Q30KQ4 102 aa15.18■□□□□ 0.02
SHD-201ENST00000543264 FLNBO75369 2602 aaKnown RBP15.17■□□□□ 0.02
SHD-201ENST00000543264 INAFM1C9JVW0 142 aa15.17■□□□□ 0.02
SHD-201ENST00000543264 Q1T7F1 81 aa15.16■□□□□ 0.02
SHD-201ENST00000543264 PSCAO43653 123 aa15.15■□□□□ 0.02
SHD-201ENST00000543264 CASC10Q5T4H9 136 aa15.15■□□□□ 0.02
SHD-201ENST00000543264 IGLV5-37A0A075B6J1 123 aa15.14■□□□□ 0.01
SHD-201ENST00000543264 DEFB131BA0A096LNP1 70 aa15.14■□□□□ 0.01
SHD-201ENST00000543264 PRB2P02812 416 aaPredicted RBP15.14■□□□□ 0.01
SHD-201ENST00000543264 LINC00476Q8WZB0 136 aa15.14■□□□□ 0.01
SHD-201ENST00000543264 TENM3Q9P273 2699 aa15.13■□□□□ 0.01
SHD-201ENST00000543264 PSPHP1O15172 72 aa15.13■□□□□ 0.01
SHD-201ENST00000543264 MRPL55Q7Z7F7 128 aaKnown RBP15.13■□□□□ 0.01
SHD-201ENST00000543264 WFDC13Q8IUB5 93 aa15.12■□□□□ 0.01
SHD-201ENST00000543264 OXLD1Q5BKU9 147 aa15.11■□□□□ 0.01
SHD-201ENST00000543264 V9GYY9 64 aa15.1■□□□□ 0.01
SHD-201ENST00000543264 NSD1Q96L73 2696 aaPredicted RBP15.08■□□□□ 0.01
SHD-201ENST00000543264 DNAH10OSP0CZ25 163 aa15.08■□□□□ 0
SHD-201ENST00000543264 CYP4F30PQ9H0H9 118 aa15.07■□□□□ 0
SHD-201ENST00000543264 TRAV22A0A0B4J277 110 aa15.06■□□□□ 0
SHD-201ENST00000543264 REG3GQ6UW15 175 aa15.06■□□□□ 0
SHD-201ENST00000543264 IGFL1Q6UW32 110 aa15.06■□□□□ 0
SHD-201ENST00000543264 BAHCC1Q9P281 2608 aa15.05■□□□□ -0
SHD-201ENST00000543264 C11orf45Q8TAV5 145 aa15.05■□□□□ -0
SHD-201ENST00000543264 KRTAP10-11P60412 298 aa15.04■□□□□ -0
SHD-201ENST00000543264 PRR15Q8IV56 129 aa15.03■□□□□ -0
SHD-201ENST00000543264 A0A087WSZ3 146 aa15.02■□□□□ -0
SHD-201ENST00000543264 NDUFB1O75438 58 aa15.02□□□□□ -0.01
SHD-201ENST00000543264 MP68P56378 58 aa15.02□□□□□ -0.01
SHD-201ENST00000543264 RPL37AP61513 92 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms