RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 Q5BKY6 102 aa0.54□□□□□ -2.32
TRAV1-1-201ENST00000542354 PDZD11Q5EBL8 140 aa0.54□□□□□ -2.32
TRAV1-1-201ENST00000542354 UBE2NLQ5JXB2 153 aa0.54□□□□□ -2.32
TRAV1-1-201ENST00000542354 SLC7A5P1Q8MH63 180 aa0.54□□□□□ -2.32
TRAV1-1-201ENST00000542354 TMEM229BQ8NBD8 167 aa0.54□□□□□ -2.32
TRAV1-1-201ENST00000542354 HIST1H2BAQ96A08 127 aa0.54□□□□□ -2.32
TRAV1-1-201ENST00000542354 PRRT1Q99946 306 aa0.54□□□□□ -2.32
TRAV1-1-201ENST00000542354 PSMG3Q9BT73 122 aaPredicted RBP0.54□□□□□ -2.32
TRAV1-1-201ENST00000542354 NHP2Q9NX24 153 aaKnown RBP0.54□□□□□ -2.32
TRAV1-1-201ENST00000542354 ERG28Q9UKR5 140 aa0.54□□□□□ -2.32
TRAV1-1-201ENST00000542354 S4R3F8 94 aa0.54□□□□□ -2.32
TRAV1-1-201ENST00000542354 LOC105371267A0A1B0GV96 52 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 TCAPO15273 167 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 ATP5HO75947 161 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 SIX6O95475 246 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 LTAP01374 205 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 MT1AP04731 61 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 DDTP30046 118 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 S100A5P33763 92 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 IFI27P40305 119 aaPredicted RBP0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 CDC34P49427 236 aaPredicted RBP0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 HERVK_113P63121 156 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 NDUFA5Q16718 116 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 TMEM128Q5BJH2 165 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 CST9LP1Q5W188 147 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 TEX43Q6ZNM6 134 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 STX12Q86Y82 276 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 BOD1L2Q8IYS8 172 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 TMEM141Q96I45 108 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 SMIM2Q9BVW6 85 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 TMEM167BQ9NRX6 74 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 CDKN2A-AS1Q9UH64 79 aa0.53□□□□□ -2.32
TRAV1-1-201ENST00000542354 A0A0J9YXY3 114 aa0.52□□□□□ -2.33
TRAV1-1-201ENST00000542354 A0A1W2PRE2 83 aa0.52□□□□□ -2.33
TRAV1-1-201ENST00000542354 INMT-MINDY4F8WBC2 141 aa0.52□□□□□ -2.33
TRAV1-1-201ENST00000542354 K7EQZ3 153 aa0.52□□□□□ -2.33
TRAV1-1-201ENST00000542354 HMGB3O15347 200 aaKnown RBP0.52□□□□□ -2.33
TRAV1-1-201ENST00000542354 ATP6V1G2O95670 118 aa0.52□□□□□ -2.33
TRAV1-1-201ENST00000542354 PPP1R17O96001 155 aa0.52□□□□□ -2.33
TRAV1-1-201ENST00000542354 S100A1P23297 94 aa0.52□□□□□ -2.33
TRAV1-1-201ENST00000542354 SDC2P34741 201 aa0.52□□□□□ -2.33
TRAV1-1-201ENST00000542354 GNGT1P63211 74 aa0.52□□□□□ -2.33
TRAV1-1-201ENST00000542354 KRTAP13-4Q3LI77 160 aa0.52□□□□□ -2.33
TRAV1-1-201ENST00000542354 LYRM7Q5U5X0 104 aa0.52□□□□□ -2.33
TRAV1-1-201ENST00000542354 SLC51BQ86UW2 128 aa0.52□□□□□ -2.33
TRAV1-1-201ENST00000542354 C9orf62Q8N4C0 152 aa0.52□□□□□ -2.33
TRAV1-1-201ENST00000542354 VCX2Q9H322 139 aa0.52□□□□□ -2.33
TRAV1-1-201ENST00000542354 SS18L2Q9UHA2 77 aa0.52□□□□□ -2.33
TRAV1-1-201ENST00000542354 SCP2D1Q9UJQ7 156 aa0.52□□□□□ -2.33
TRAV1-1-201ENST00000542354 IGKV3D-7A0A0C4DH55 119 aa0.51□□□□□ -2.33
TRAV1-1-201ENST00000542354 TEX46H3BTG2 121 aa0.51□□□□□ -2.33
TRAV1-1-201ENST00000542354 PFDN1O60925 122 aa0.51□□□□□ -2.33
TRAV1-1-201ENST00000542354 SNAPINO95295 136 aa0.51□□□□□ -2.33
TRAV1-1-201ENST00000542354 SFT2D2O95562 160 aa0.51□□□□□ -2.33
TRAV1-1-201ENST00000542354 APOA1P02647 267 aa0.51□□□□□ -2.33
TRAV1-1-201ENST00000542354 S100A6P06703 90 aa0.51□□□□□ -2.33
TRAV1-1-201ENST00000542354 PVALBP20472 110 aaPredicted RBP0.51□□□□□ -2.33
TRAV1-1-201ENST00000542354 GCHFRP30047 84 aa0.51□□□□□ -2.33
TRAV1-1-201ENST00000542354 LINC00158P58513 81 aa0.51□□□□□ -2.33
TRAV1-1-201ENST00000542354 IFITM2Q01629 132 aa0.51□□□□□ -2.33
TRAV1-1-201ENST00000542354 ZNF726P1Q15940 193 aa0.51□□□□□ -2.33
TRAV1-1-201ENST00000542354 Q6JHZ5 121 aa0.51□□□□□ -2.33
TRAV1-1-201ENST00000542354 ATP6V1G3Q96LB4 118 aa0.51□□□□□ -2.33
TRAV1-1-201ENST00000542354 WDR61Q9GZS3 305 aaKnown RBP0.51□□□□□ -2.33
TRAV1-1-201ENST00000542354 NXT2Q9NPJ8 142 aaKnown RBP0.51□□□□□ -2.33
TRAV1-1-201ENST00000542354 TRAV23DV6A0A075B6W5 121 aa0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 A0A0D9SG42 100 aa0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 GATCO43716 136 aaKnown RBP0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 CXorf1O96002 111 aa0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 S100A9P06702 114 aaKnown RBP0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 STAG3L2P0CL84 134 aa0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 STAG3L3P0CL85 134 aa0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 AKAIN1P0CW23 69 aa0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 PMVKQ15126 192 aa0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 RGS21Q2M5E4 152 aa0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 S100A7L2Q5SY68 101 aa0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 BAGE2Q86Y30 109 aa0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 LINC00518Q8N0U6 118 aa0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 ENKURQ8TC29 256 aa0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 CLEC2BQ92478 149 aa0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 SIGMAR1Q99720 223 aa0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 C9orf16Q9BUW7 83 aa0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 CNFNQ9BYD5 112 aa0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 R4GN34 69 aa0.5□□□□□ -2.33
TRAV1-1-201ENST00000542354 TRBV20OR9-2A0A075B6H5 130 aa0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 A0A087WXM4 84 aa0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 TRBV10-2A0A0K0K1G8 114 aa0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 LOC389332A0A1B0GUA5 103 aa0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 LINC00862A6NCI5 91 aa0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 CCDC160A6NGH7 325 aa0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 LINC00587B1AMM8 73 aa0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 F8W036 122 aa0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 AKR1C3P42330 323 aa0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 IFITM3Q01628 133 aa0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 SSBP1Q04837 148 aaKnown RBP0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 MRPL51Q4U2R6 128 aaKnown RBP0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 LINC01554Q52M75 96 aa0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 AMN1Q8IY45 258 aa0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 C8orf59Q8N0T1 100 aaPredicted RBP0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 SCGB1C1Q8TD33 95 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms