RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 PCP4L1A6NKN8 68 aa5.82□□□□□ -1.48
DDX55-208ENST00000541259 CFC1BP0CG36 223 aa5.82□□□□□ -1.48
DDX55-208ENST00000541259 CFC1P0CG37 223 aa5.82□□□□□ -1.48
DDX55-208ENST00000541259 BVES-AS1Q5T3Y7 98 aa5.82□□□□□ -1.48
DDX55-208ENST00000541259 TRBV10-3A0A0K0K1G6 114 aa5.81□□□□□ -1.48
DDX55-208ENST00000541259 TRBV10-2A0A0K0K1G8 114 aa5.81□□□□□ -1.48
DDX55-208ENST00000541259 SMR3BP02814 79 aaPredicted RBP5.81□□□□□ -1.48
DDX55-208ENST00000541259 LBHQ53QV2 105 aaPredicted RBP5.81□□□□□ -1.48
DDX55-208ENST00000541259 OR13C6PQ8NH95 151 aa5.81□□□□□ -1.48
DDX55-208ENST00000541259 KRTAP3-1Q9BYR8 98 aa5.81□□□□□ -1.48
DDX55-208ENST00000541259 IGLV1-50A0A075B6I6 118 aa5.8□□□□□ -1.48
DDX55-208ENST00000541259 IGLV6-57P01721 117 aa5.8□□□□□ -1.48
DDX55-208ENST00000541259 UBE2BP63146 152 aa5.8□□□□□ -1.48
DDX55-208ENST00000541259 S100A7L2Q5SY68 101 aa5.8□□□□□ -1.48
DDX55-208ENST00000541259 NHP2Q9NX24 153 aaKnown RBP5.8□□□□□ -1.48
DDX55-208ENST00000541259 PKHD1L1Q86WI1 4243 aa5.79□□□□□ -1.48
DDX55-208ENST00000541259 A6NDN8 102 aa5.79□□□□□ -1.48
DDX55-208ENST00000541259 K7ERJ3 54 aa5.79□□□□□ -1.48
DDX55-208ENST00000541259 CDK2AP2O75956 126 aa5.79□□□□□ -1.48
DDX55-208ENST00000541259 KRTAP17-1Q9BYP8 105 aa5.79□□□□□ -1.48
DDX55-208ENST00000541259 TRAV13-2A0A0B4J235 113 aa5.78□□□□□ -1.48
DDX55-208ENST00000541259 M0R143 59 aa5.78□□□□□ -1.48
DDX55-208ENST00000541259 BATFQ16520 125 aa5.78□□□□□ -1.48
DDX55-208ENST00000541259 PSORS1C2Q9UIG4 136 aa5.78□□□□□ -1.48
DDX55-208ENST00000541259 A0A0B4J2C4 111 aa5.77□□□□□ -1.49
DDX55-208ENST00000541259 A0A1B0GWB2 263 aa5.77□□□□□ -1.49
DDX55-208ENST00000541259 RPL13AP40429 203 aaKnown RBP5.77□□□□□ -1.49
DDX55-208ENST00000541259 RAB37Q96AX2 223 aa5.77□□□□□ -1.49
DDX55-208ENST00000541259 TMEM126AQ9H061 195 aa5.77□□□□□ -1.49
DDX55-208ENST00000541259 KCNQ1DNQ9H478 68 aa5.77□□□□□ -1.49
DDX55-208ENST00000541259 H7C2G1 150 aa5.76□□□□□ -1.49
DDX55-208ENST00000541259 SNHG12Q9BXW3 62 aa5.76□□□□□ -1.49
DDX55-208ENST00000541259 PRO1854Q9UHT4 67 aa5.76□□□□□ -1.49
DDX55-208ENST00000541259 TRAV23DV6A0A075B6W5 121 aa5.75□□□□□ -1.49
DDX55-208ENST00000541259 PRYO14603 147 aa5.75□□□□□ -1.49
DDX55-208ENST00000541259 REG3GQ6UW15 175 aa5.75□□□□□ -1.49
DDX55-208ENST00000541259 SMIM11BQ8TCY0 68 aa5.75□□□□□ -1.49
DDX55-208ENST00000541259 SPRR1AP35321 89 aa5.74□□□□□ -1.49
DDX55-208ENST00000541259 C1orf137Q5JT78 98 aa5.74□□□□□ -1.49
DDX55-208ENST00000541259 KRTAP4-16G5E9R7 235 aaPredicted RBP5.73□□□□□ -1.49
DDX55-208ENST00000541259 ZNF73O43830 326 aaPredicted RBP5.73□□□□□ -1.49
DDX55-208ENST00000541259 KRTAP10-4P60372 401 aaPredicted RBP5.73□□□□□ -1.49
DDX55-208ENST00000541259 RPL37AP61513 92 aaKnown RBP5.73□□□□□ -1.49
DDX55-208ENST00000541259 C6orf99Q4VX62 202 aa5.73□□□□□ -1.49
DDX55-208ENST00000541259 LCE4AQ5TA78 99 aa5.73□□□□□ -1.49
DDX55-208ENST00000541259 HERC2O95714 4834 aa5.73□□□□□ -1.49
DDX55-208ENST00000541259 BCE1O60756 84 aa5.72□□□□□ -1.49
DDX55-208ENST00000541259 TSPAN13O95857 204 aa5.72□□□□□ -1.49
DDX55-208ENST00000541259 Q1RN00 199 aa5.72□□□□□ -1.49
DDX55-208ENST00000541259 FAM19A1Q7Z5A9 133 aa5.72□□□□□ -1.49
DDX55-208ENST00000541259 SRRM2Q9UQ35 2752 aaKnown RBP5.72□□□□□ -1.49
DDX55-208ENST00000541259 ETDCA0A1B0GVM5 59 aa5.71□□□□□ -1.5
DDX55-208ENST00000541259 IGLV7-43P04211 117 aa5.71□□□□□ -1.5
DDX55-208ENST00000541259 RPL28P46779 137 aaKnown RBP5.71□□□□□ -1.5
DDX55-208ENST00000541259 PRLHP81277 87 aa5.71□□□□□ -1.5
DDX55-208ENST00000541259 DIRC1Q969H9 104 aa5.71□□□□□ -1.5
DDX55-208ENST00000541259 NAA38Q9BRA0 125 aaKnown RBP5.71□□□□□ -1.5
DDX55-208ENST00000541259 KRTAP9-9Q9BYP9 154 aa5.71□□□□□ -1.5
DDX55-208ENST00000541259 KRTAP9-4Q9BYQ2 154 aa5.71□□□□□ -1.5
DDX55-208ENST00000541259 KRTAP9-7A8MTY7 169 aa5.7□□□□□ -1.5
DDX55-208ENST00000541259 Q5VSD8 79 aa5.7□□□□□ -1.5
DDX55-208ENST00000541259 KRTAP13-1Q8IUC0 172 aa5.7□□□□□ -1.5
DDX55-208ENST00000541259 Q8N1X5 172 aa5.7□□□□□ -1.5
DDX55-208ENST00000541259 CBY1Q9Y3M2 126 aa5.7□□□□□ -1.5
DDX55-208ENST00000541259 TAX1BP3O14907 124 aa5.69□□□□□ -1.5
DDX55-208ENST00000541259 TRIAP1O43715 76 aa5.69□□□□□ -1.5
DDX55-208ENST00000541259 COX7BP24311 80 aa5.69□□□□□ -1.5
DDX55-208ENST00000541259 UBE2AP49459 152 aa5.69□□□□□ -1.5
DDX55-208ENST00000541259 TRBV7-6A0A0J9YX20 115 aa5.68□□□□□ -1.5
DDX55-208ENST00000541259 PSMB2P49721 201 aa5.68□□□□□ -1.5
DDX55-208ENST00000541259 ELOF1P60002 83 aaKnown RBP5.68□□□□□ -1.5
DDX55-208ENST00000541259 Q6ZRX8 168 aa5.68□□□□□ -1.5
DDX55-208ENST00000541259 SMCR5Q8TEV8 140 aa5.68□□□□□ -1.5
DDX55-208ENST00000541259 Q9BRP9 147 aa5.68□□□□□ -1.5
DDX55-208ENST00000541259 ZNF861PO60384 105 aa5.67□□□□□ -1.5
DDX55-208ENST00000541259 ERC2-IT1O76042 136 aa5.67□□□□□ -1.5
DDX55-208ENST00000541259 KRTAP4-5Q9BYR2 181 aa5.67□□□□□ -1.5
DDX55-208ENST00000541259 H0Y9J4 135 aa5.66□□□□□ -1.5
DDX55-208ENST00000541259 H3BUT2 72 aa5.66□□□□□ -1.5
DDX55-208ENST00000541259 VAMP3Q15836 100 aa5.66□□□□□ -1.5
DDX55-208ENST00000541259 COL5A1-AS1Q5SY13 56 aa5.66□□□□□ -1.5
DDX55-208ENST00000541259 CLEC2BQ92478 149 aa5.66□□□□□ -1.5
DDX55-208ENST00000541259 FAM218AQ96MZ4 157 aa5.66□□□□□ -1.5
DDX55-208ENST00000541259 HIGD2AQ9BW72 106 aa5.66□□□□□ -1.5
DDX55-208ENST00000541259 LINC00575Q6W349 94 aa5.65□□□□□ -1.5
DDX55-208ENST00000541259 ABCA13Q86UQ4 5058 aa5.65□□□□□ -1.51
DDX55-208ENST00000541259 FAT3Q8TDW7 4589 aa5.64□□□□□ -1.51
DDX55-208ENST00000541259 H0YGX0 51 aa5.64□□□□□ -1.51
DDX55-208ENST00000541259 SCGB1C2P0DMR2 95 aa5.64□□□□□ -1.51
DDX55-208ENST00000541259 COX6CP09669 75 aa5.63□□□□□ -1.51
DDX55-208ENST00000541259 INAFM2P0DMQ5 153 aa5.63□□□□□ -1.51
DDX55-208ENST00000541259 SPINK6Q6UWN8 80 aa5.63□□□□□ -1.51
DDX55-208ENST00000541259 ST20-AS1Q8NBB2 130 aa5.63□□□□□ -1.51
DDX55-208ENST00000541259 DHRS4-AS1Q9P1J3 65 aa5.63□□□□□ -1.51
DDX55-208ENST00000541259 FLG2Q5D862 2391 aaPredicted RBP5.62□□□□□ -1.51
DDX55-208ENST00000541259 hADV29S1A0JD25 119 aa5.62□□□□□ -1.51
DDX55-208ENST00000541259 LRP1Q07954 4544 aaKnown RBP5.62□□□□□ -1.51
DDX55-208ENST00000541259 A0A1W2PPM0 123 aa5.61□□□□□ -1.51
DDX55-208ENST00000541259 TCL1BO95988 128 aa5.61□□□□□ -1.51
DDX55-208ENST00000541259 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms