RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 PRLHP81277 87 aa8.51□□□□□ -1.05
LTBR-209ENST00000541102 KRTAP4-16G5E9R7 235 aaPredicted RBP8.5□□□□□ -1.05
LTBR-209ENST00000541102 PRYO14603 147 aa8.5□□□□□ -1.05
LTBR-209ENST00000541102 PPDPFQ9H3Y8 114 aa8.5□□□□□ -1.05
LTBR-209ENST00000541102 SPRR1AP35321 89 aa8.49□□□□□ -1.05
LTBR-209ENST00000541102 S100A7L2Q5SY68 101 aa8.49□□□□□ -1.05
LTBR-209ENST00000541102 FAM19A1Q7Z5A9 133 aa8.49□□□□□ -1.05
LTBR-209ENST00000541102 UBR4Q5T4S7 5183 aa8.49□□□□□ -1.05
LTBR-209ENST00000541102 A4D1N5 150 aa8.48□□□□□ -1.05
LTBR-209ENST00000541102 UBE2AP49459 152 aa8.48□□□□□ -1.05
LTBR-209ENST00000541102 OR13C6PQ8NH95 151 aa8.48□□□□□ -1.05
LTBR-209ENST00000541102 HIST1H4GQ99525 98 aa8.48□□□□□ -1.05
LTBR-209ENST00000541102 HIGD1BQ9P298 99 aa8.48□□□□□ -1.05
LTBR-209ENST00000541102 TRAV23DV6A0A075B6W5 121 aa8.46□□□□□ -1.06
LTBR-209ENST00000541102 RPL13AP40429 203 aaKnown RBP8.46□□□□□ -1.06
LTBR-209ENST00000541102 C12orf57Q99622 126 aa8.46□□□□□ -1.06
LTBR-209ENST00000541102 S100A12P80511 92 aa8.45□□□□□ -1.06
LTBR-209ENST00000541102 LINC00518Q8N0U6 118 aa8.45□□□□□ -1.06
LTBR-209ENST00000541102 COPS9Q8WXC6 57 aa8.45□□□□□ -1.06
LTBR-209ENST00000541102 PRO1933Q9H354 126 aa8.45□□□□□ -1.06
LTBR-209ENST00000541102 B5MCH6 92 aa8.44□□□□□ -1.06
LTBR-209ENST00000541102 SMIM6P0DI80 62 aa8.44□□□□□ -1.06
LTBR-209ENST00000541102 ANAPC11Q9NYG5 84 aa8.44□□□□□ -1.06
LTBR-209ENST00000541102 ETDCA0A1B0GVM5 59 aa8.43□□□□□ -1.06
LTBR-209ENST00000541102 A6NDN8 102 aa8.43□□□□□ -1.06
LTBR-209ENST00000541102 ZNF73O43830 326 aaPredicted RBP8.43□□□□□ -1.06
LTBR-209ENST00000541102 LRP2P98164 4655 aa8.42□□□□□ -1.06
LTBR-209ENST00000541102 SMCR5Q8TEV8 140 aa8.42□□□□□ -1.06
LTBR-209ENST00000541102 Q9BRP9 147 aa8.42□□□□□ -1.06
LTBR-209ENST00000541102 A0A087X002 238 aa8.41□□□□□ -1.06
LTBR-209ENST00000541102 ERC2-IT1O76042 136 aa8.41□□□□□ -1.06
LTBR-209ENST00000541102 CRYGAP11844 174 aa8.41□□□□□ -1.06
LTBR-209ENST00000541102 HIGD2AQ9BW72 106 aa8.41□□□□□ -1.06
LTBR-209ENST00000541102 UQCR10Q9UDW1 63 aa8.41□□□□□ -1.06
LTBR-209ENST00000541102 FXYD2P54710 66 aa8.4□□□□□ -1.06
LTBR-209ENST00000541102 Q6ZRX8 168 aa8.4□□□□□ -1.06
LTBR-209ENST00000541102 CEND1Q8N111 149 aa8.4□□□□□ -1.06
LTBR-209ENST00000541102 TSPAN13O95857 204 aa8.39□□□□□ -1.07
LTBR-209ENST00000541102 CFC1BP0CG36 223 aa8.39□□□□□ -1.07
LTBR-209ENST00000541102 CFC1P0CG37 223 aa8.39□□□□□ -1.07
LTBR-209ENST00000541102 TAL2Q16559 108 aa8.39□□□□□ -1.07
LTBR-209ENST00000541102 C6orf99Q4VX62 202 aa8.39□□□□□ -1.07
LTBR-209ENST00000541102 TYMSOSQ8TAI1 123 aa8.39□□□□□ -1.07
LTBR-209ENST00000541102 SMIM11BQ8TCY0 68 aa8.39□□□□□ -1.07
LTBR-209ENST00000541102 TRAV13-2A0A0B4J235 113 aa8.38□□□□□ -1.07
LTBR-209ENST00000541102 HSD52Q0P140 79 aa8.36□□□□□ -1.07
LTBR-209ENST00000541102 PRR4Q16378 134 aa8.36□□□□□ -1.07
LTBR-209ENST00000541102 ELOF1P60002 83 aaKnown RBP8.35□□□□□ -1.07
LTBR-209ENST00000541102 KRTAP13-2Q52LG2 175 aa8.35□□□□□ -1.07
LTBR-209ENST00000541102 SPRR4Q96PI1 79 aa8.35□□□□□ -1.07
LTBR-209ENST00000541102 COX7BP24311 80 aa8.34□□□□□ -1.07
LTBR-209ENST00000541102 FAM229BQ4G0N7 80 aa8.34□□□□□ -1.07
LTBR-209ENST00000541102 H7C2G1 150 aa8.33□□□□□ -1.08
LTBR-209ENST00000541102 ST20-AS1Q8NBB2 130 aa8.33□□□□□ -1.08
LTBR-209ENST00000541102 CBY1Q9Y3M2 126 aa8.33□□□□□ -1.08
LTBR-209ENST00000541102 A0A0B4J2C4 111 aa8.32□□□□□ -1.08
LTBR-209ENST00000541102 K7ERJ3 54 aa8.32□□□□□ -1.08
LTBR-209ENST00000541102 TRBV7-6A0A0J9YX20 115 aa8.31□□□□□ -1.08
LTBR-209ENST00000541102 HINT1P49773 126 aaPredicted RBP8.31□□□□□ -1.08
LTBR-209ENST00000541102 BVES-AS1Q5T3Y7 98 aa8.31□□□□□ -1.08
LTBR-209ENST00000541102 RAB37Q96AX2 223 aa8.31□□□□□ -1.08
LTBR-209ENST00000541102 CTAG1AP78358 180 aa8.3□□□□□ -1.08
LTBR-209ENST00000541102 NHP2Q9NX24 153 aaKnown RBP8.3□□□□□ -1.08
LTBR-209ENST00000541102 A0A1B0GWB2 263 aa8.29□□□□□ -1.08
LTBR-209ENST00000541102 GAGE2AQ6NT46 116 aa8.29□□□□□ -1.08
LTBR-209ENST00000541102 C3orf22Q8N5N4 141 aa8.29□□□□□ -1.08
LTBR-209ENST00000541102 LINC00304Q8N9R0 145 aa8.29□□□□□ -1.08
LTBR-209ENST00000541102 LPAP08519 4548 aa8.29□□□□□ -1.08
LTBR-209ENST00000541102 PRO1854Q9UHT4 67 aa8.28□□□□□ -1.08
LTBR-209ENST00000541102 TMEM238LA0A1B0GVL6 79 aa8.27□□□□□ -1.09
LTBR-209ENST00000541102 A6NJY4 79 aa8.27□□□□□ -1.09
LTBR-209ENST00000541102 LINC00483Q53H64 154 aa8.27□□□□□ -1.09
LTBR-209ENST00000541102 DHRS4-AS1Q9P1J3 65 aa8.27□□□□□ -1.09
LTBR-209ENST00000541102 ZNF706Q9Y5V0 76 aaPredicted RBP8.26□□□□□ -1.09
LTBR-209ENST00000541102 LINC00575Q6W349 94 aa8.25□□□□□ -1.09
LTBR-209ENST00000541102 TSTD3H0UI37 97 aa8.24□□□□□ -1.09
LTBR-209ENST00000541102 RETNLBQ9BQ08 111 aa8.24□□□□□ -1.09
LTBR-209ENST00000541102 LINC01547P58512 204 aaPredicted RBP8.23□□□□□ -1.09
LTBR-209ENST00000541102 Q1RN00 199 aa8.23□□□□□ -1.09
LTBR-209ENST00000541102 DEFB105AQ8NG35 78 aa8.23□□□□□ -1.09
LTBR-209ENST00000541102 FAM218AQ96MZ4 157 aa8.23□□□□□ -1.09
LTBR-209ENST00000541102 TRIAP1O43715 76 aa8.22□□□□□ -1.09
LTBR-209ENST00000541102 VAMP3Q15836 100 aa8.22□□□□□ -1.09
LTBR-209ENST00000541102 RNF213Q63HN8 5207 aa8.21□□□□□ -1.09
LTBR-209ENST00000541102 IGLV9-49A0A0B4J1Y8 123 aa8.2□□□□□ -1.1
LTBR-209ENST00000541102 SPRR1BP22528 89 aa8.2□□□□□ -1.1
LTBR-209ENST00000541102 hADV29S1A0JD25 119 aa8.19□□□□□ -1.1
LTBR-209ENST00000541102 C4orf48Q5BLP8 95 aa8.19□□□□□ -1.1
LTBR-209ENST00000541102 IGLV5-48A0A075B6I7 105 aa8.18□□□□□ -1.1
LTBR-209ENST00000541102 MOBPQ13875 183 aa8.18□□□□□ -1.1
LTBR-209ENST00000541102 SMIM29Q86T20 159 aa8.18□□□□□ -1.1
LTBR-209ENST00000541102 Q8N377 158 aa8.18□□□□□ -1.1
LTBR-209ENST00000541102 M0R143 59 aa8.17□□□□□ -1.1
LTBR-209ENST00000541102 SPAG11AQ6PDA7 123 aa8.17□□□□□ -1.1
LTBR-209ENST00000541102 Q6ZQY7 126 aa8.17□□□□□ -1.1
LTBR-209ENST00000541102 Q8NBF4 154 aa8.17□□□□□ -1.1
LTBR-209ENST00000541102 CLEC2BQ92478 149 aa8.17□□□□□ -1.1
LTBR-209ENST00000541102 TEX49A0A1B0GTD5 131 aa8.16□□□□□ -1.1
LTBR-209ENST00000541102 SLC25A20O43772 301 aa8.16□□□□□ -1.1
LTBR-209ENST00000541102 BATFQ16520 125 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms