RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 KRTAP26-1Q6PEX3 210 aa6.45□□□□□ -1.38
CLIP1-212ENST00000540304 LINC00846Q9NV44 126 aa6.45□□□□□ -1.38
CLIP1-212ENST00000540304 C22orf24Q9Y442 160 aa6.45□□□□□ -1.38
CLIP1-212ENST00000540304 DNAH9Q9NYC9 4486 aa6.45□□□□□ -1.38
CLIP1-212ENST00000540304 KLKP1Q107X0 134 aa6.45□□□□□ -1.38
CLIP1-212ENST00000540304 C10orf25Q5T742 122 aa6.44□□□□□ -1.38
CLIP1-212ENST00000540304 UNQ6190/PRO20217Q6UXQ8 127 aa6.44□□□□□ -1.38
CLIP1-212ENST00000540304 MUC7Q8TAX7 377 aa6.44□□□□□ -1.38
CLIP1-212ENST00000540304 LINC00588Q9Y4M8 146 aa6.44□□□□□ -1.38
CLIP1-212ENST00000540304 GVQW2A0A096LPI5 108 aaPredicted RBP6.43□□□□□ -1.38
CLIP1-212ENST00000540304 A8MU10 97 aa6.43□□□□□ -1.38
CLIP1-212ENST00000540304 M0R378 163 aa6.43□□□□□ -1.38
CLIP1-212ENST00000540304 B9D2Q9BPU9 175 aa6.43□□□□□ -1.38
CLIP1-212ENST00000540304 TENM2Q9NT68 2774 aa6.42□□□□□ -1.38
CLIP1-212ENST00000540304 IGKV2D-24A0A075B6R9 120 aa6.42□□□□□ -1.38
CLIP1-212ENST00000540304 DNAL4O96015 105 aa6.41□□□□□ -1.38
CLIP1-212ENST00000540304 BAALC-AS2P0C853 105 aa6.41□□□□□ -1.38
CLIP1-212ENST00000540304 HIGD2BQ4VC39 106 aa6.41□□□□□ -1.38
CLIP1-212ENST00000540304 SMIM11BQ8TCY0 68 aa6.41□□□□□ -1.38
CLIP1-212ENST00000540304 PRR3P79522 188 aaKnown RBP6.41□□□□□ -1.38
CLIP1-212ENST00000540304 C15orf56Q8N910 161 aa6.41□□□□□ -1.38
CLIP1-212ENST00000540304 C6orf48Q9UBA6 75 aa6.41□□□□□ -1.38
CLIP1-212ENST00000540304 DNHD1Q96M86 4753 aa6.41□□□□□ -1.38
CLIP1-212ENST00000540304 DNAH10Q8IVF4 4471 aa6.4□□□□□ -1.38
CLIP1-212ENST00000540304 TMEM256-PLSCR3K7ERE1 68 aa6.4□□□□□ -1.38
CLIP1-212ENST00000540304 CAMK2N2Q96S95 79 aa6.4□□□□□ -1.38
CLIP1-212ENST00000540304 Q9HAA7 133 aa6.4□□□□□ -1.39
CLIP1-212ENST00000540304 DNAH1Q9P2D7 4330 aa6.39□□□□□ -1.39
CLIP1-212ENST00000540304 ZNF73O43830 326 aaPredicted RBP6.39□□□□□ -1.39
CLIP1-212ENST00000540304 CSMD3Q7Z407 3707 aa6.38□□□□□ -1.39
CLIP1-212ENST00000540304 TRAV7A0A075B6U4 112 aa6.38□□□□□ -1.39
CLIP1-212ENST00000540304 ATP5EP56381 51 aaPredicted RBP6.38□□□□□ -1.39
CLIP1-212ENST00000540304 Q8NDZ9 215 aa6.38□□□□□ -1.39
CLIP1-212ENST00000540304 C9orf129Q5T035 196 aaKnown RBP6.38□□□□□ -1.39
CLIP1-212ENST00000540304 FAM218AQ96MZ4 157 aa6.38□□□□□ -1.39
CLIP1-212ENST00000540304 C14orf132Q9NPU4 83 aa6.38□□□□□ -1.39
CLIP1-212ENST00000540304 PRKDCP78527 4128 aaKnown RBP6.38□□□□□ -1.39
CLIP1-212ENST00000540304 H0YGX0 51 aa6.37□□□□□ -1.39
CLIP1-212ENST00000540304 NCR3O14931 201 aa6.37□□□□□ -1.39
CLIP1-212ENST00000540304 DNAH7Q8WXX0 4024 aa6.36□□□□□ -1.39
CLIP1-212ENST00000540304 PSPHP1O15172 72 aa6.35□□□□□ -1.39
CLIP1-212ENST00000540304 VPREB1P12018 145 aa6.35□□□□□ -1.39
CLIP1-212ENST00000540304 SYCNQ0VAF6 134 aa6.34□□□□□ -1.39
CLIP1-212ENST00000540304 XAGE1AQ9HD64 81 aa6.34□□□□□ -1.39
CLIP1-212ENST00000540304 PLECQ15149 4684 aaKnown RBP6.34□□□□□ -1.39
CLIP1-212ENST00000540304 A0A087WYN8 130 aa6.34□□□□□ -1.39
CLIP1-212ENST00000540304 APLNQ9ULZ1 77 aa6.34□□□□□ -1.39
CLIP1-212ENST00000540304 Q6ZRP5 223 aa6.33□□□□□ -1.4
CLIP1-212ENST00000540304 Q6ZVQ6 151 aa6.33□□□□□ -1.4
CLIP1-212ENST00000540304 LRCOL1A6NCL2 159 aa6.33□□□□□ -1.4
CLIP1-212ENST00000540304 NDUFC1O43677 76 aa6.33□□□□□ -1.4
CLIP1-212ENST00000540304 UBE2DNLQ8IWF7 75 aa6.32□□□□□ -1.4
CLIP1-212ENST00000540304 A8MUN3 132 aa6.32□□□□□ -1.4
CLIP1-212ENST00000540304 IGLV6-57P01721 117 aa6.32□□□□□ -1.4
CLIP1-212ENST00000540304 CASC10Q5T4H9 136 aa6.32□□□□□ -1.4
CLIP1-212ENST00000540304 SERTAD4-AS1Q5TG53 156 aa6.32□□□□□ -1.4
CLIP1-212ENST00000540304 LECT2O14960 151 aa6.31□□□□□ -1.4
CLIP1-212ENST00000540304 NUPR2A6NF83 97 aa6.31□□□□□ -1.4
CLIP1-212ENST00000540304 C6orf99Q4VX62 202 aa6.31□□□□□ -1.4
CLIP1-212ENST00000540304 MEGF8Q7Z7M0 2845 aa6.3□□□□□ -1.4
CLIP1-212ENST00000540304 NDUFS5O43920 106 aa6.3□□□□□ -1.4
CLIP1-212ENST00000540304 FUSP35637 526 aaKnown RBP eCLIP6.3□□□□□ -1.4
CLIP1-212ENST00000540304 SLPIP03973 132 aa6.29□□□□□ -1.4
CLIP1-212ENST00000540304 Q1T7F1 81 aa6.29□□□□□ -1.4
CLIP1-212ENST00000540304 STARD9Q9P2P6 4700 aa6.29□□□□□ -1.4
CLIP1-212ENST00000540304 TRBV10-3A0A0K0K1G6 114 aa6.29□□□□□ -1.4
CLIP1-212ENST00000540304 TLX1NBP0CAT3 122 aa6.29□□□□□ -1.4
CLIP1-212ENST00000540304 LCE2AQ5TA79 106 aaPredicted RBP6.29□□□□□ -1.4
CLIP1-212ENST00000540304 KRTAP1-5Q9BYS1 174 aa6.29□□□□□ -1.4
CLIP1-212ENST00000540304 UBE2BP63146 152 aa6.28□□□□□ -1.4
CLIP1-212ENST00000540304 Q8N814 137 aa6.28□□□□□ -1.4
CLIP1-212ENST00000540304 LINC00167Q96N53 147 aa6.28□□□□□ -1.4
CLIP1-212ENST00000540304 ATP5EP2Q5VTU8 51 aa6.27□□□□□ -1.41
CLIP1-212ENST00000540304 SPTSSBQ8NFR3 76 aa6.27□□□□□ -1.41
CLIP1-212ENST00000540304 ORMDL1Q9P0S3 153 aa6.27□□□□□ -1.41
CLIP1-212ENST00000540304 TRBV7-4A0A0J9YYF1 115 aa6.27□□□□□ -1.41
CLIP1-212ENST00000540304 DYNC2H1Q8NCM8 4307 aaKnown RBP6.27□□□□□ -1.41
CLIP1-212ENST00000540304 TRAV22A0A0B4J277 110 aa6.26□□□□□ -1.41
CLIP1-212ENST00000540304 BCE1O60756 84 aa6.26□□□□□ -1.41
CLIP1-212ENST00000540304 LINC00575Q6W349 94 aa6.26□□□□□ -1.41
CLIP1-212ENST00000540304 PHF5AQ7RTV0 110 aaKnown RBP6.26□□□□□ -1.41
CLIP1-212ENST00000540304 DIRC1Q969H9 104 aa6.26□□□□□ -1.41
CLIP1-212ENST00000540304 C16orf90A8MZG2 172 aa6.25□□□□□ -1.41
CLIP1-212ENST00000540304 PSCAO43653 123 aa6.25□□□□□ -1.41
CLIP1-212ENST00000540304 LCA10Q71F78 164 aa6.25□□□□□ -1.41
CLIP1-212ENST00000540304 OBSCN-AS1Q96MR7 158 aa6.25□□□□□ -1.41
CLIP1-212ENST00000540304 PLA2G2DQ9UNK4 145 aa6.25□□□□□ -1.41
CLIP1-212ENST00000540304 A6NN06 94 aa6.24□□□□□ -1.41
CLIP1-212ENST00000540304 NKAPP1Q8N9T2 125 aa6.24□□□□□ -1.41
CLIP1-212ENST00000540304 hDV103S1A0JD37 113 aa6.23□□□□□ -1.41
CLIP1-212ENST00000540304 C7orf65Q6ZTY9 151 aa6.23□□□□□ -1.41
CLIP1-212ENST00000540304 TMEM254Q8TBM7 123 aa6.23□□□□□ -1.41
CLIP1-212ENST00000540304 NBDYA0A0U1RRE5 68 aa6.22□□□□□ -1.41
CLIP1-212ENST00000540304 COX7BP24311 80 aa6.22□□□□□ -1.41
CLIP1-212ENST00000540304 ELOF1P60002 83 aaKnown RBP6.22□□□□□ -1.41
CLIP1-212ENST00000540304 TGP01266 2768 aa6.22□□□□□ -1.41
CLIP1-212ENST00000540304 IGLV5-37A0A075B6J1 123 aa6.21□□□□□ -1.41
CLIP1-212ENST00000540304 CNBPP62633 177 aaKnown RBP6.21□□□□□ -1.41
CLIP1-212ENST00000540304 C14orf177Q52M58 125 aa6.21□□□□□ -1.41
CLIP1-212ENST00000540304 KRTAP21-3Q3LHN1 58 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms