RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 IFITM2Q01629 132 aa10.73□□□□□ -0.69
LPCAT3-210ENST00000540090 HRCT1Q6UXD1 115 aa10.73□□□□□ -0.69
LPCAT3-210ENST00000540090 SPRR1BP22528 89 aa10.72□□□□□ -0.69
LPCAT3-210ENST00000540090 M0R2T5 61 aa10.71□□□□□ -0.69
LPCAT3-210ENST00000540090 SLC25A34Q6PIV7 304 aa10.69□□□□□ -0.7
LPCAT3-210ENST00000540090 J3QQQ9 107 aa10.68□□□□□ -0.7
LPCAT3-210ENST00000540090 HINT1P49773 126 aaPredicted RBP10.68□□□□□ -0.7
LPCAT3-210ENST00000540090 COMMD7Q86VX2 200 aa10.68□□□□□ -0.7
LPCAT3-210ENST00000540090 NMUP48645 174 aa10.67□□□□□ -0.7
LPCAT3-210ENST00000540090 SOSTDC1Q6X4U4 206 aa10.67□□□□□ -0.7
LPCAT3-210ENST00000540090 H0Y8G0 127 aa10.66□□□□□ -0.7
LPCAT3-210ENST00000540090 EIF4EBP3O60516 100 aaPredicted RBP10.66□□□□□ -0.7
LPCAT3-210ENST00000540090 LAMTOR3Q9UHA4 124 aa10.66□□□□□ -0.7
LPCAT3-210ENST00000540090 HSBP1O75506 76 aa10.65□□□□□ -0.7
LPCAT3-210ENST00000540090 CD164Q04900 197 aa10.65□□□□□ -0.7
LPCAT3-210ENST00000540090 CBY1Q9Y3M2 126 aa10.65□□□□□ -0.7
LPCAT3-210ENST00000540090 PLNP26678 52 aa10.63□□□□□ -0.71
LPCAT3-210ENST00000540090 LGALS3P17931 250 aaKnown RBP10.62□□□□□ -0.71
LPCAT3-210ENST00000540090 NPC2P61916 151 aa10.62□□□□□ -0.71
LPCAT3-210ENST00000540090 ADAMTSL4-AS1Q5T5F5 129 aa10.62□□□□□ -0.71
LPCAT3-210ENST00000540090 COX6B2Q6YFQ2 88 aa10.62□□□□□ -0.71
LPCAT3-210ENST00000540090 DHRS4-AS1Q9P1J3 65 aa10.62□□□□□ -0.71
LPCAT3-210ENST00000540090 HERVK_113P61574 105 aa10.61□□□□□ -0.71
LPCAT3-210ENST00000540090 RPL37P61927 97 aaKnown RBP10.61□□□□□ -0.71
LPCAT3-210ENST00000540090 Q5XG85 94 aa10.6□□□□□ -0.71
LPCAT3-210ENST00000540090 LEPROTL1O95214 131 aa10.59□□□□□ -0.71
LPCAT3-210ENST00000540090 PRO1933Q9H354 126 aa10.59□□□□□ -0.71
LPCAT3-210ENST00000540090 A0A0J9YXY3 114 aa10.58□□□□□ -0.72
LPCAT3-210ENST00000540090 DPM2O94777 84 aa10.58□□□□□ -0.72
LPCAT3-210ENST00000540090 C1orf195Q5TG92 126 aa10.58□□□□□ -0.72
LPCAT3-210ENST00000540090 YPEL4Q96NS1 127 aa10.58□□□□□ -0.72
LPCAT3-210ENST00000540090 H7C2G1 150 aa10.56□□□□□ -0.72
LPCAT3-210ENST00000540090 APOC3P02656 99 aa10.56□□□□□ -0.72
LPCAT3-210ENST00000540090 SNAPINO95295 136 aa10.55□□□□□ -0.72
LPCAT3-210ENST00000540090 Q1RN00 199 aa10.55□□□□□ -0.72
LPCAT3-210ENST00000540090 OR13C6PQ8NH95 151 aa10.55□□□□□ -0.72
LPCAT3-210ENST00000540090 PMCHL2Q9BQD1 86 aa10.55□□□□□ -0.72
LPCAT3-210ENST00000540090 IGKCP01834 107 aa10.54□□□□□ -0.72
LPCAT3-210ENST00000540090 TAL2Q16559 108 aa10.54□□□□□ -0.72
LPCAT3-210ENST00000540090 SPANXCQ9NY87 97 aa10.54□□□□□ -0.72
LPCAT3-210ENST00000540090 TEX49A0A1B0GTD5 131 aa10.52□□□□□ -0.73
LPCAT3-210ENST00000540090 KRTAP9-7A8MTY7 169 aa10.52□□□□□ -0.73
LPCAT3-210ENST00000540090 AKR1D1P51857 326 aa10.52□□□□□ -0.73
LPCAT3-210ENST00000540090 ELOF1P60002 83 aaKnown RBP10.52□□□□□ -0.73
LPCAT3-210ENST00000540090 SVBPQ8N300 66 aa10.52□□□□□ -0.73
LPCAT3-210ENST00000540090 DEFB105AQ8NG35 78 aa10.52□□□□□ -0.73
LPCAT3-210ENST00000540090 LINC00308Q8TCZ7 52 aa10.52□□□□□ -0.73
LPCAT3-210ENST00000540090 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.51□□□□□ -0.73
LPCAT3-210ENST00000540090 COX7BP24311 80 aa10.51□□□□□ -0.73
LPCAT3-210ENST00000540090 LINC00310P59036 64 aa10.51□□□□□ -0.73
LPCAT3-210ENST00000540090 SPANXDQ9BXN6 97 aa10.51□□□□□ -0.73
LPCAT3-210ENST00000540090 HSPB8Q9UJY1 196 aa10.51□□□□□ -0.73
LPCAT3-210ENST00000540090 SMIM29Q86T20 159 aa10.5□□□□□ -0.73
LPCAT3-210ENST00000540090 LITAFQ99732 161 aa10.5□□□□□ -0.73
LPCAT3-210ENST00000540090 E9PLD3 99 aa10.49□□□□□ -0.73
LPCAT3-210ENST00000540090 SERF1AO75920 110 aa10.49□□□□□ -0.73
LPCAT3-210ENST00000540090 NDUFA5Q16718 116 aa10.48□□□□□ -0.73
LPCAT3-210ENST00000540090 C6orf99Q4VX62 202 aa10.48□□□□□ -0.73
LPCAT3-210ENST00000540090 FABP4P15090 132 aa10.47□□□□□ -0.73
LPCAT3-210ENST00000540090 A0A0G2JQZ4 141 aa10.45□□□□□ -0.74
LPCAT3-210ENST00000540090 TIMM17BO60830 172 aa10.44□□□□□ -0.74
LPCAT3-210ENST00000540090 TRGC2P03986 189 aa10.44□□□□□ -0.74
LPCAT3-210ENST00000540090 LINC00518Q8N0U6 118 aa10.43□□□□□ -0.74
LPCAT3-210ENST00000540090 IGLV5-48A0A075B6I7 105 aa10.42□□□□□ -0.74
LPCAT3-210ENST00000540090 TRBV7-6A0A0J9YX20 115 aa10.42□□□□□ -0.74
LPCAT3-210ENST00000540090 SSPOA2VEC9 5147 aa10.42□□□□□ -0.74
LPCAT3-210ENST00000540090 TCL1BO95988 128 aa10.4□□□□□ -0.74
LPCAT3-210ENST00000540090 USH2AO75445 5202 aa10.39□□□□□ -0.75
LPCAT3-210ENST00000540090 Q6Q795 121 aa10.38□□□□□ -0.75
LPCAT3-210ENST00000540090 A0A1B0GWB2 263 aa10.37□□□□□ -0.75
LPCAT3-210ENST00000540090 CFC1P0CG37 223 aa10.35□□□□□ -0.75
LPCAT3-210ENST00000540090 KRTAP9-8Q9BYQ0 159 aa10.34□□□□□ -0.75
LPCAT3-210ENST00000540090 ZNF815PA8K554 130 aa10.33□□□□□ -0.76
LPCAT3-210ENST00000540090 ATP11AUNQ6ZP68 121 aa10.32□□□□□ -0.76
LPCAT3-210ENST00000540090 Q75L30 129 aa10.31□□□□□ -0.76
LPCAT3-210ENST00000540090 SYS1-DBNDD2H3BUS1 97 aa10.3□□□□□ -0.76
LPCAT3-210ENST00000540090 TTTY13Q9BZ97 58 aa10.3□□□□□ -0.76
LPCAT3-210ENST00000540090 A4D1N5 150 aa10.29□□□□□ -0.76
LPCAT3-210ENST00000540090 PCP2Q8IVA1 136 aa10.28□□□□□ -0.76
LPCAT3-210ENST00000540090 A6NDN8 102 aa10.26□□□□□ -0.77
LPCAT3-210ENST00000540090 LINC01545Q5VT33 79 aa10.26□□□□□ -0.77
LPCAT3-210ENST00000540090 OBSCN-AS1Q96MR7 158 aa10.26□□□□□ -0.77
LPCAT3-210ENST00000540090 NHP2Q9NX24 153 aaKnown RBP10.26□□□□□ -0.77
LPCAT3-210ENST00000540090 FCGBPQ9Y6R7 5405 aaPredicted RBP10.24□□□□□ -0.77
LPCAT3-210ENST00000540090 TRBV7-7A0A0K0K1E9 115 aa10.22□□□□□ -0.77
LPCAT3-210ENST00000540090 C20orf202A1L168 122 aa10.22□□□□□ -0.77
LPCAT3-210ENST00000540090 F8WEM9 126 aa10.22□□□□□ -0.77
LPCAT3-210ENST00000540090 IFITM1P13164 125 aa10.22□□□□□ -0.77
LPCAT3-210ENST00000540090 COPS9Q8WXC6 57 aa10.22□□□□□ -0.77
LPCAT3-210ENST00000540090 PET117Q6UWS5 81 aa10.21□□□□□ -0.77
LPCAT3-210ENST00000540090 SCGB1D4Q6XE38 83 aa10.2□□□□□ -0.78
LPCAT3-210ENST00000540090 Q6JHZ5 121 aa10.19□□□□□ -0.78
LPCAT3-210ENST00000540090 SMIM11BQ8TCY0 68 aa10.19□□□□□ -0.78
LPCAT3-210ENST00000540090 COLCA2A8K830 154 aa10.18□□□□□ -0.78
LPCAT3-210ENST00000540090 Q6ZVH6 145 aa10.18□□□□□ -0.78
LPCAT3-210ENST00000540090 IGFL1Q6UW32 110 aa10.17□□□□□ -0.78
LPCAT3-210ENST00000540090 MUSTN1Q8IVN3 82 aa10.17□□□□□ -0.78
LPCAT3-210ENST00000540090 CLEC2BQ92478 149 aa10.17□□□□□ -0.78
LPCAT3-210ENST00000540090 TRAV13-2A0A0B4J235 113 aa10.16□□□□□ -0.78
LPCAT3-210ENST00000540090 Q96NJ1 140 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms