RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 Q8NDZ9 215 aa11.28□□□□□ -0.6
PCDHB17P-201ENST00000539533 NDUFC2-KCTD14E9PQ53 114 aa11.27□□□□□ -0.61
PCDHB17P-201ENST00000539533 C20orf197Q8N268 126 aa11.27□□□□□ -0.61
PCDHB17P-201ENST00000539533 ZNF561-AS1K7EIQ3 104 aa11.26□□□□□ -0.61
PCDHB17P-201ENST00000539533 KRTAP1-5Q9BYS1 174 aa11.26□□□□□ -0.61
PCDHB17P-201ENST00000539533 CASC10Q5T4H9 136 aa11.25□□□□□ -0.61
PCDHB17P-201ENST00000539533 LINC00575Q6W349 94 aa11.24□□□□□ -0.61
PCDHB17P-201ENST00000539533 C6orf48Q9UBA6 75 aa11.24□□□□□ -0.61
PCDHB17P-201ENST00000539533 UBL5Q9BZL1 73 aa11.23□□□□□ -0.61
PCDHB17P-201ENST00000539533 FAM236DA0A1B0GTK5 79 aa11.23□□□□□ -0.61
PCDHB17P-201ENST00000539533 FAM236CP0DP71 79 aa11.23□□□□□ -0.61
PCDHB17P-201ENST00000539533 CAMK2N2Q96S95 79 aa11.23□□□□□ -0.61
PCDHB17P-201ENST00000539533 DNAH10Q8IVF4 4471 aa11.21□□□□□ -0.62
PCDHB17P-201ENST00000539533 TGP01266 2768 aa11.21□□□□□ -0.62
PCDHB17P-201ENST00000539533 TRBV10-3A0A0K0K1G6 114 aa11.2□□□□□ -0.62
PCDHB17P-201ENST00000539533 Q6ZRU5 148 aa11.2□□□□□ -0.62
PCDHB17P-201ENST00000539533 GVQW2A0A096LPI5 108 aaPredicted RBP11.2□□□□□ -0.62
PCDHB17P-201ENST00000539533 RMI2Q96E14 147 aa11.2□□□□□ -0.62
PCDHB17P-201ENST00000539533 RBM3P98179 157 aaKnown RBP11.19□□□□□ -0.62
PCDHB17P-201ENST00000539533 Q6ZQT0 140 aa11.19□□□□□ -0.62
PCDHB17P-201ENST00000539533 MUC7Q8TAX7 377 aa11.18□□□□□ -0.62
PCDHB17P-201ENST00000539533 LOC110117498A0A087WWA1 95 aa11.17□□□□□ -0.62
PCDHB17P-201ENST00000539533 LAMTOR3Q9UHA4 124 aa11.17□□□□□ -0.62
PCDHB17P-201ENST00000539533 IGLV6-57P01721 117 aa11.16□□□□□ -0.62
PCDHB17P-201ENST00000539533 H7BZZ5 65 aa11.16□□□□□ -0.62
PCDHB17P-201ENST00000539533 SERP1Q9Y6X1 66 aa11.15□□□□□ -0.62
PCDHB17P-201ENST00000539533 TRAV7A0A075B6U4 112 aa11.14□□□□□ -0.63
PCDHB17P-201ENST00000539533 SYCNQ0VAF6 134 aa11.14□□□□□ -0.63
PCDHB17P-201ENST00000539533 XAGE1AQ9HD64 81 aa11.13□□□□□ -0.63
PCDHB17P-201ENST00000539533 VPS13DQ5THJ4 4388 aa11.13□□□□□ -0.63
PCDHB17P-201ENST00000539533 M0R2N4 97 aa11.13□□□□□ -0.63
PCDHB17P-201ENST00000539533 EPM2AB3EWF7 344 aa11.12□□□□□ -0.63
PCDHB17P-201ENST00000539533 Q6ZQY7 126 aa11.12□□□□□ -0.63
PCDHB17P-201ENST00000539533 NBDYA0A0U1RRE5 68 aa11.12□□□□□ -0.63
PCDHB17P-201ENST00000539533 HAMPP81172 84 aa11.11□□□□□ -0.63
PCDHB17P-201ENST00000539533 F8WDY8 70 aa11.11□□□□□ -0.63
PCDHB17P-201ENST00000539533 LINC01547P58512 204 aaPredicted RBP11.11□□□□□ -0.63
PCDHB17P-201ENST00000539533 BCE1O60756 84 aa11.1□□□□□ -0.63
PCDHB17P-201ENST00000539533 SNURFQ9Y675 71 aa11.1□□□□□ -0.63
PCDHB17P-201ENST00000539533 PSCAO43653 123 aa11.09□□□□□ -0.63
PCDHB17P-201ENST00000539533 Q6ZRP5 223 aa11.09□□□□□ -0.63
PCDHB17P-201ENST00000539533 Q6ZVQ6 151 aa11.09□□□□□ -0.63
PCDHB17P-201ENST00000539533 H3BQ85 93 aa11.08□□□□□ -0.64
PCDHB17P-201ENST00000539533 KLKP1Q107X0 134 aa11.08□□□□□ -0.64
PCDHB17P-201ENST00000539533 PDE6GP18545 87 aa11.08□□□□□ -0.64
PCDHB17P-201ENST00000539533 DIRC1Q969H9 104 aa11.08□□□□□ -0.64
PCDHB17P-201ENST00000539533 LINC00336Q6ZUF6 198 aa11.06□□□□□ -0.64
PCDHB17P-201ENST00000539533 F8WEM9 126 aa11.05□□□□□ -0.64
PCDHB17P-201ENST00000539533 ZNF73O43830 326 aaPredicted RBP11.04□□□□□ -0.64
PCDHB17P-201ENST00000539533 PRO0628Q9UI54 55 aa11.04□□□□□ -0.64
PCDHB17P-201ENST00000539533 KMT2AQ03164 3969 aa11.04□□□□□ -0.64
PCDHB17P-201ENST00000539533 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.03□□□□□ -0.64
PCDHB17P-201ENST00000539533 COX7BP24311 80 aa11.03□□□□□ -0.64
PCDHB17P-201ENST00000539533 CXCL6P80162 114 aa11.03□□□□□ -0.64
PCDHB17P-201ENST00000539533 WWC2-AS2Q96NR7 200 aa11.03□□□□□ -0.64
PCDHB17P-201ENST00000539533 SMIM26A0A096LP01 95 aa11.02□□□□□ -0.65
PCDHB17P-201ENST00000539533 TRBV7-4A0A0J9YYF1 115 aa11.02□□□□□ -0.65
PCDHB17P-201ENST00000539533 Q6ZRN7 208 aaPredicted RBP11.02□□□□□ -0.65
PCDHB17P-201ENST00000539533 TLX1NBP0CAT3 122 aa11.01□□□□□ -0.65
PCDHB17P-201ENST00000539533 ELOF1P60002 83 aaKnown RBP11.01□□□□□ -0.65
PCDHB17P-201ENST00000539533 FP248Q71RG6 208 aaPredicted RBP11.01□□□□□ -0.65
PCDHB17P-201ENST00000539533 VPREB1P12018 145 aa11□□□□□ -0.65
PCDHB17P-201ENST00000539533 SCXQ7RTU7 201 aa10.99□□□□□ -0.65
PCDHB17P-201ENST00000539533 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.98□□□□□ -0.65
PCDHB17P-201ENST00000539533 TRBV7-6A0A0J9YX20 115 aa10.98□□□□□ -0.65
PCDHB17P-201ENST00000539533 LRCOL1A6NCL2 159 aa10.98□□□□□ -0.65
PCDHB17P-201ENST00000539533 DNAH2Q9P225 4427 aa10.97□□□□□ -0.65
PCDHB17P-201ENST00000539533 LY6G6CO95867 125 aa10.96□□□□□ -0.65
PCDHB17P-201ENST00000539533 CNBPP62633 177 aaKnown RBP10.96□□□□□ -0.66
PCDHB17P-201ENST00000539533 SERTAD4-AS1Q5TG53 156 aa10.96□□□□□ -0.66
PCDHB17P-201ENST00000539533 Q6ZR54 194 aa10.96□□□□□ -0.66
PCDHB17P-201ENST00000539533 LINC00474Q9P2X8 69 aa10.95□□□□□ -0.66
PCDHB17P-201ENST00000539533 M0R378 163 aa10.95□□□□□ -0.66
PCDHB17P-201ENST00000539533 NDUFC1O43677 76 aa10.95□□□□□ -0.66
PCDHB17P-201ENST00000539533 C14orf177Q52M58 125 aa10.95□□□□□ -0.66
PCDHB17P-201ENST00000539533 FAM168BA1KXE4 195 aa10.94□□□□□ -0.66
PCDHB17P-201ENST00000539533 NREPQ16612 68 aa10.92□□□□□ -0.66
PCDHB17P-201ENST00000539533 LINC00528Q8N1L1 170 aa10.92□□□□□ -0.66
PCDHB17P-201ENST00000539533 ATP5EP56381 51 aaPredicted RBP10.9□□□□□ -0.66
PCDHB17P-201ENST00000539533 KRTAP7-1Q8IUC3 87 aa10.9□□□□□ -0.66
PCDHB17P-201ENST00000539533 LINC00476Q8WZB0 136 aa10.9□□□□□ -0.66
PCDHB17P-201ENST00000539533 NKAPP1Q8N9T2 125 aa10.9□□□□□ -0.66
PCDHB17P-201ENST00000539533 PKIGQ9Y2B9 76 aa10.9□□□□□ -0.66
PCDHB17P-201ENST00000539533 PLA2G2DQ9UNK4 145 aa10.89□□□□□ -0.67
PCDHB17P-201ENST00000539533 A0A096LNI7 61 aa10.89□□□□□ -0.67
PCDHB17P-201ENST00000539533 TMEM254Q8TBM7 123 aa10.89□□□□□ -0.67
PCDHB17P-201ENST00000539533 IGKV2-24A0A0C4DH68 120 aa10.88□□□□□ -0.67
PCDHB17P-201ENST00000539533 BPY2O14599 106 aa10.88□□□□□ -0.67
PCDHB17P-201ENST00000539533 C7orf33Q8WU49 177 aa10.88□□□□□ -0.67
PCDHB17P-201ENST00000539533 A0A087WTM6 91 aa10.87□□□□□ -0.67
PCDHB17P-201ENST00000539533 C3orf84H3BNL1 204 aa10.87□□□□□ -0.67
PCDHB17P-201ENST00000539533 C16orf90A8MZG2 172 aa10.86□□□□□ -0.67
PCDHB17P-201ENST00000539533 C9orf163Q8N9P6 203 aa10.86□□□□□ -0.67
PCDHB17P-201ENST00000539533 C1orf134Q5TEV5 83 aa10.85□□□□□ -0.67
PCDHB17P-201ENST00000539533 BRK1Q8WUW1 75 aa10.85□□□□□ -0.67
PCDHB17P-201ENST00000539533 Q8N9L7 120 aa10.84□□□□□ -0.67
PCDHB17P-201ENST00000539533 IGLV5-37A0A075B6J1 123 aa10.84□□□□□ -0.67
PCDHB17P-201ENST00000539533 FAM229BQ4G0N7 80 aa10.84□□□□□ -0.67
PCDHB17P-201ENST00000539533 RPL37AP8A6NKH3 93 aa10.83□□□□□ -0.68
PCDHB17P-201ENST00000539533 FUSP35637 526 aaKnown RBP eCLIP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms