RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 TRGC2P03986 189 aa9.58□□□□□ -0.88
PDCD2-207ENST00000539212 SEC61BP60468 96 aaKnown RBP9.58□□□□□ -0.88
PDCD2-207ENST00000539212 C9orf153Q5TBE3 101 aa9.58□□□□□ -0.88
PDCD2-207ENST00000539212 SOSTDC1Q6X4U4 206 aa9.58□□□□□ -0.88
PDCD2-207ENST00000539212 SSBP3-AS1Q7Z2R9 100 aa9.58□□□□□ -0.88
PDCD2-207ENST00000539212 ST20-AS1Q8NBB2 130 aa9.58□□□□□ -0.88
PDCD2-207ENST00000539212 RPS29P62273 56 aaKnown RBP9.57□□□□□ -0.88
PDCD2-207ENST00000539212 S100A7L2Q5SY68 101 aa9.57□□□□□ -0.88
PDCD2-207ENST00000539212 MIEN1Q9BRT3 115 aa9.57□□□□□ -0.88
PDCD2-207ENST00000539212 FSIP2Q5CZC0 6907 aa9.57□□□□□ -0.88
PDCD2-207ENST00000539212 TRAV23DV6A0A075B6W5 121 aa9.56□□□□□ -0.88
PDCD2-207ENST00000539212 FABP4P15090 132 aa9.56□□□□□ -0.88
PDCD2-207ENST00000539212 PLNP26678 52 aa9.56□□□□□ -0.88
PDCD2-207ENST00000539212 LINC01547P58512 204 aaPredicted RBP9.56□□□□□ -0.88
PDCD2-207ENST00000539212 SLC25A20O43772 301 aa9.55□□□□□ -0.88
PDCD2-207ENST00000539212 DPM2O94777 84 aa9.55□□□□□ -0.88
PDCD2-207ENST00000539212 LGALS3P17931 250 aaKnown RBP9.55□□□□□ -0.88
PDCD2-207ENST00000539212 NDUFC2O95298 119 aa9.54□□□□□ -0.88
PDCD2-207ENST00000539212 ADAMTSL4-AS1Q5T5F5 129 aa9.54□□□□□ -0.88
PDCD2-207ENST00000539212 XP32Q5T750 250 aa9.54□□□□□ -0.88
PDCD2-207ENST00000539212 IGKCP01834 107 aa9.53□□□□□ -0.88
PDCD2-207ENST00000539212 NMUP48645 174 aa9.53□□□□□ -0.88
PDCD2-207ENST00000539212 HERVK_113P61574 105 aa9.53□□□□□ -0.88
PDCD2-207ENST00000539212 H3BS24 57 aa9.52□□□□□ -0.89
PDCD2-207ENST00000539212 ZNF73O43830 326 aaPredicted RBP9.52□□□□□ -0.89
PDCD2-207ENST00000539212 A0A0J9YXY3 114 aa9.51□□□□□ -0.89
PDCD2-207ENST00000539212 HSPB8Q9UJY1 196 aa9.51□□□□□ -0.89
PDCD2-207ENST00000539212 JOSD1Q15040 202 aaPredicted RBP9.5□□□□□ -0.89
PDCD2-207ENST00000539212 HRCT1Q6UXD1 115 aa9.48□□□□□ -0.89
PDCD2-207ENST00000539212 E9PLD3 99 aa9.45□□□□□ -0.9
PDCD2-207ENST00000539212 LITAFQ99732 161 aa9.45□□□□□ -0.9
PDCD2-207ENST00000539212 C9orf92A6NGG3 77 aa9.43□□□□□ -0.9
PDCD2-207ENST00000539212 KRTAP19-2Q3LHN2 52 aa9.43□□□□□ -0.9
PDCD2-207ENST00000539212 OR13C6PQ8NH95 151 aa9.43□□□□□ -0.9
PDCD2-207ENST00000539212 LINC00308Q8TCZ7 52 aa9.43□□□□□ -0.9
PDCD2-207ENST00000539212 SPRR1BP22528 89 aa9.42□□□□□ -0.9
PDCD2-207ENST00000539212 SPANXCQ9NY87 97 aa9.41□□□□□ -0.9
PDCD2-207ENST00000539212 COLCA2A8K830 154 aa9.4□□□□□ -0.9
PDCD2-207ENST00000539212 HINT1P49773 126 aaPredicted RBP9.4□□□□□ -0.9
PDCD2-207ENST00000539212 PCOTHQ58A44 107 aa9.4□□□□□ -0.9
PDCD2-207ENST00000539212 TTTY13Q9BZ97 58 aa9.4□□□□□ -0.9
PDCD2-207ENST00000539212 C5orf52A6NGY3 159 aa9.38□□□□□ -0.91
PDCD2-207ENST00000539212 LIMD2Q9BT23 127 aa9.38□□□□□ -0.91
PDCD2-207ENST00000539212 IGLV8-61A0A075B6I0 122 aa9.37□□□□□ -0.91
PDCD2-207ENST00000539212 SYS1-DBNDD2H3BUS1 97 aa9.37□□□□□ -0.91
PDCD2-207ENST00000539212 Q1RN00 199 aa9.37□□□□□ -0.91
PDCD2-207ENST00000539212 DHRS4-AS1Q9P1J3 65 aa9.37□□□□□ -0.91
PDCD2-207ENST00000539212 MT1HP80294 61 aa9.36□□□□□ -0.91
PDCD2-207ENST00000539212 ZNF815PA8K554 130 aa9.35□□□□□ -0.91
PDCD2-207ENST00000539212 H7C2G1 150 aa9.35□□□□□ -0.91
PDCD2-207ENST00000539212 TIMM17BO60830 172 aa9.35□□□□□ -0.91
PDCD2-207ENST00000539212 COX7BP24311 80 aa9.35□□□□□ -0.91
PDCD2-207ENST00000539212 ELOF1P60002 83 aaKnown RBP9.35□□□□□ -0.91
PDCD2-207ENST00000539212 C6orf99Q4VX62 202 aa9.35□□□□□ -0.91
PDCD2-207ENST00000539212 SLC7A5P1Q8MH63 180 aa9.35□□□□□ -0.91
PDCD2-207ENST00000539212 DEFB105AQ8NG35 78 aa9.35□□□□□ -0.91
PDCD2-207ENST00000539212 SPANXDQ9BXN6 97 aa9.35□□□□□ -0.91
PDCD2-207ENST00000539212 LAMTOR3Q9UHA4 124 aa9.35□□□□□ -0.91
PDCD2-207ENST00000539212 CBY1Q9Y3M2 126 aa9.35□□□□□ -0.91
PDCD2-207ENST00000539212 SLC25A34Q6PIV7 304 aa9.34□□□□□ -0.91
PDCD2-207ENST00000539212 A0A0G2JQZ4 141 aa9.33□□□□□ -0.92
PDCD2-207ENST00000539212 CRCT1Q9UGL9 99 aa9.33□□□□□ -0.92
PDCD2-207ENST00000539212 LINC01545Q5VT33 79 aa9.32□□□□□ -0.92
PDCD2-207ENST00000539212 TAL2Q16559 108 aa9.31□□□□□ -0.92
PDCD2-207ENST00000539212 FLGP20930 4061 aaPredicted RBP9.3□□□□□ -0.92
PDCD2-207ENST00000539212 HIST1H2BKO60814 126 aa9.3□□□□□ -0.92
PDCD2-207ENST00000539212 HIST1H2BJP06899 126 aa9.3□□□□□ -0.92
PDCD2-207ENST00000539212 HIST1H2BOP23527 126 aa9.3□□□□□ -0.92
PDCD2-207ENST00000539212 HIST1H2BBP33778 126 aa9.3□□□□□ -0.92
PDCD2-207ENST00000539212 HIST1H2BDP58876 126 aa9.3□□□□□ -0.92
PDCD2-207ENST00000539212 HIST1H2BCP62807 126 aa9.3□□□□□ -0.92
PDCD2-207ENST00000539212 HIST2H2BEQ16778 126 aa9.3□□□□□ -0.92
PDCD2-207ENST00000539212 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.3□□□□□ -0.92
PDCD2-207ENST00000539212 HIST1H2BHQ93079 126 aa9.3□□□□□ -0.92
PDCD2-207ENST00000539212 HIST1H2BNQ99877 126 aa9.3□□□□□ -0.92
PDCD2-207ENST00000539212 HIST1H2BMQ99879 126 aa9.3□□□□□ -0.92
PDCD2-207ENST00000539212 SMIM29Q86T20 159 aa9.29□□□□□ -0.92
PDCD2-207ENST00000539212 PRO1933Q9H354 126 aa9.28□□□□□ -0.92
PDCD2-207ENST00000539212 TEX49A0A1B0GTD5 131 aa9.27□□□□□ -0.93
PDCD2-207ENST00000539212 PET117Q6UWS5 81 aa9.27□□□□□ -0.93
PDCD2-207ENST00000539212 C3orf79P0CE67 100 aa9.26□□□□□ -0.93
PDCD2-207ENST00000539212 CD164Q04900 197 aa9.26□□□□□ -0.93
PDCD2-207ENST00000539212 LINC00518Q8N0U6 118 aa9.26□□□□□ -0.93
PDCD2-207ENST00000539212 C1orf195Q5TG92 126 aa9.25□□□□□ -0.93
PDCD2-207ENST00000539212 IGLV5-48A0A075B6I7 105 aa9.22□□□□□ -0.93
PDCD2-207ENST00000539212 KRTDAPP60985 99 aa9.22□□□□□ -0.93
PDCD2-207ENST00000539212 SCGB1D4Q6XE38 83 aa9.22□□□□□ -0.93
PDCD2-207ENST00000539212 TRBV7-6A0A0J9YX20 115 aa9.21□□□□□ -0.94
PDCD2-207ENST00000539212 A0A1B0GWB2 263 aa9.21□□□□□ -0.94
PDCD2-207ENST00000539212 A6NDN8 102 aa9.21□□□□□ -0.94
PDCD2-207ENST00000539212 AKR1D1P51857 326 aa9.21□□□□□ -0.94
PDCD2-207ENST00000539212 KRTAP10-6P60371 365 aaPredicted RBP9.21□□□□□ -0.94
PDCD2-207ENST00000539212 Q5XG85 94 aa9.21□□□□□ -0.94
PDCD2-207ENST00000539212 CFC1BP0CG36 223 aa9.2□□□□□ -0.94
PDCD2-207ENST00000539212 RPL37P61927 97 aaKnown RBP9.2□□□□□ -0.94
PDCD2-207ENST00000539212 MUSTN1Q8IVN3 82 aa9.19□□□□□ -0.94
PDCD2-207ENST00000539212 ATOH7Q8N100 152 aa9.19□□□□□ -0.94
PDCD2-207ENST00000539212 PCP2Q8IVA1 136 aa9.17□□□□□ -0.94
PDCD2-207ENST00000539212 IFITM1P13164 125 aa9.15□□□□□ -0.94
PDCD2-207ENST00000539212 SMIM11BQ8TCY0 68 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms