RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 IGLV6-57P01721 117 aa7.48□□□□□ -1.21
CLSTN3-205ENST00000535452 ASB16-AS1Q495Z4 193 aa7.48□□□□□ -1.21
CLSTN3-205ENST00000535452 YPEL4Q96NS1 127 aa7.48□□□□□ -1.21
CLSTN3-205ENST00000535452 PMCHL2Q9BQD1 86 aa7.48□□□□□ -1.21
CLSTN3-205ENST00000535452 LAMTOR3Q9UHA4 124 aa7.48□□□□□ -1.21
CLSTN3-205ENST00000535452 ERC2-IT1O76042 136 aa7.47□□□□□ -1.21
CLSTN3-205ENST00000535452 COPS9Q8WXC6 57 aa7.47□□□□□ -1.21
CLSTN3-205ENST00000535452 Q9BRP9 147 aa7.47□□□□□ -1.21
CLSTN3-205ENST00000535452 SPANXCQ9NY87 97 aa7.47□□□□□ -1.21
CLSTN3-205ENST00000535452 DHRS4-AS1Q9P1J3 65 aa7.47□□□□□ -1.21
CLSTN3-205ENST00000535452 A0A0J9YXY3 114 aa7.46□□□□□ -1.22
CLSTN3-205ENST00000535452 E9PLD3 99 aa7.46□□□□□ -1.22
CLSTN3-205ENST00000535452 Q8N377 158 aa7.46□□□□□ -1.22
CLSTN3-205ENST00000535452 LCE2AQ5TA79 106 aaPredicted RBP7.44□□□□□ -1.22
CLSTN3-205ENST00000535452 LINC00518Q8N0U6 118 aa7.44□□□□□ -1.22
CLSTN3-205ENST00000535452 TAL2Q16559 108 aa7.43□□□□□ -1.22
CLSTN3-205ENST00000535452 SPANXDQ9BXN6 97 aa7.43□□□□□ -1.22
CLSTN3-205ENST00000535452 ZNF815PA8K554 130 aa7.41□□□□□ -1.22
CLSTN3-205ENST00000535452 TIMM17BO60830 172 aa7.41□□□□□ -1.22
CLSTN3-205ENST00000535452 SCGB1D4Q6XE38 83 aa7.41□□□□□ -1.22
CLSTN3-205ENST00000535452 MUC17Q685J3 4493 aa7.4□□□□□ -1.22
CLSTN3-205ENST00000535452 SYS1-DBNDD2H3BUS1 97 aa7.4□□□□□ -1.22
CLSTN3-205ENST00000535452 COX7BP24311 80 aa7.4□□□□□ -1.22
CLSTN3-205ENST00000535452 HRCT1Q6UXD1 115 aa7.4□□□□□ -1.22
CLSTN3-205ENST00000535452 ST20-AS1Q8NBB2 130 aa7.4□□□□□ -1.22
CLSTN3-205ENST00000535452 LINC00308Q8TCZ7 52 aa7.4□□□□□ -1.22
CLSTN3-205ENST00000535452 C20orf202A1L168 122 aa7.39□□□□□ -1.23
CLSTN3-205ENST00000535452 ADAMTSL4-AS1Q5T5F5 129 aa7.39□□□□□ -1.23
CLSTN3-205ENST00000535452 LINC00310P59036 64 aa7.38□□□□□ -1.23
CLSTN3-205ENST00000535452 PET117Q6UWS5 81 aa7.38□□□□□ -1.23
CLSTN3-205ENST00000535452 SOSTDC1Q6X4U4 206 aa7.38□□□□□ -1.23
CLSTN3-205ENST00000535452 DEFB105AQ8NG35 78 aa7.38□□□□□ -1.23
CLSTN3-205ENST00000535452 PRO1933Q9H354 126 aa7.38□□□□□ -1.23
CLSTN3-205ENST00000535452 XP32Q5T750 250 aa7.37□□□□□ -1.23
CLSTN3-205ENST00000535452 TEX49A0A1B0GTD5 131 aa7.36□□□□□ -1.23
CLSTN3-205ENST00000535452 H7C2G1 150 aa7.36□□□□□ -1.23
CLSTN3-205ENST00000535452 AKR1D1P51857 326 aa7.36□□□□□ -1.23
CLSTN3-205ENST00000535452 C6orf99Q4VX62 202 aa7.36□□□□□ -1.23
CLSTN3-205ENST00000535452 NHP2Q9NX24 153 aaKnown RBP7.36□□□□□ -1.23
CLSTN3-205ENST00000535452 FAT4Q6V0I7 4981 aa7.36□□□□□ -1.23
CLSTN3-205ENST00000535452 A6NDN8 102 aa7.35□□□□□ -1.23
CLSTN3-205ENST00000535452 SPRR1BP22528 89 aa7.35□□□□□ -1.23
CLSTN3-205ENST00000535452 COLCA2A8K830 154 aa7.34□□□□□ -1.23
CLSTN3-205ENST00000535452 ELOF1P60002 83 aaKnown RBP7.34□□□□□ -1.23
CLSTN3-205ENST00000535452 CD164Q04900 197 aa7.34□□□□□ -1.23
CLSTN3-205ENST00000535452 Q1RN00 199 aa7.34□□□□□ -1.23
CLSTN3-205ENST00000535452 A0A1B0GWB2 263 aa7.33□□□□□ -1.24
CLSTN3-205ENST00000535452 A4D1N5 150 aa7.33□□□□□ -1.24
CLSTN3-205ENST00000535452 LINC01545Q5VT33 79 aa7.33□□□□□ -1.24
CLSTN3-205ENST00000535452 TRBV7-6A0A0J9YX20 115 aa7.32□□□□□ -1.24
CLSTN3-205ENST00000535452 KRTAP9-6A0A140TA67 174 aa7.32□□□□□ -1.24
CLSTN3-205ENST00000535452 C9orf92A6NGG3 77 aa7.32□□□□□ -1.24
CLSTN3-205ENST00000535452 F8WEM9 126 aa7.32□□□□□ -1.24
CLSTN3-205ENST00000535452 IFITM1P13164 125 aa7.32□□□□□ -1.24
CLSTN3-205ENST00000535452 KRTDAPP60985 99 aa7.32□□□□□ -1.24
CLSTN3-205ENST00000535452 Q6ZVH6 145 aa7.32□□□□□ -1.24
CLSTN3-205ENST00000535452 IGLV8-61A0A075B6I0 122 aa7.31□□□□□ -1.24
CLSTN3-205ENST00000535452 EIF4EBP3O60516 100 aaPredicted RBP7.3□□□□□ -1.24
CLSTN3-205ENST00000535452 HIST1H2BKO60814 126 aa7.3□□□□□ -1.24
CLSTN3-205ENST00000535452 HIST1H2BJP06899 126 aa7.3□□□□□ -1.24
CLSTN3-205ENST00000535452 HIST1H2BOP23527 126 aa7.3□□□□□ -1.24
CLSTN3-205ENST00000535452 HIST1H2BBP33778 126 aa7.3□□□□□ -1.24
CLSTN3-205ENST00000535452 HIST1H2BDP58876 126 aa7.3□□□□□ -1.24
CLSTN3-205ENST00000535452 HIST1H2BCP62807 126 aa7.3□□□□□ -1.24
CLSTN3-205ENST00000535452 VAMP3Q15836 100 aa7.3□□□□□ -1.24
CLSTN3-205ENST00000535452 HIST2H2BEQ16778 126 aa7.3□□□□□ -1.24
CLSTN3-205ENST00000535452 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.3□□□□□ -1.24
CLSTN3-205ENST00000535452 SLC7A5P1Q8MH63 180 aa7.3□□□□□ -1.24
CLSTN3-205ENST00000535452 HIST1H2BHQ93079 126 aa7.3□□□□□ -1.24
CLSTN3-205ENST00000535452 LITAFQ99732 161 aa7.3□□□□□ -1.24
CLSTN3-205ENST00000535452 HIST1H2BNQ99877 126 aa7.3□□□□□ -1.24
CLSTN3-205ENST00000535452 HIST1H2BMQ99879 126 aa7.3□□□□□ -1.24
CLSTN3-205ENST00000535452 TRAV13-2A0A0B4J235 113 aa7.29□□□□□ -1.24
CLSTN3-205ENST00000535452 TCL1BO95988 128 aa7.29□□□□□ -1.24
CLSTN3-205ENST00000535452 C3orf79P0CE67 100 aa7.27□□□□□ -1.25
CLSTN3-205ENST00000535452 PCOTHQ58A44 107 aa7.27□□□□□ -1.25
CLSTN3-205ENST00000535452 CFC1BP0CG36 223 aa7.26□□□□□ -1.25
CLSTN3-205ENST00000535452 TTTY13Q9BZ97 58 aa7.25□□□□□ -1.25
CLSTN3-205ENST00000535452 HSBP1L1C9JCN9 74 aa7.24□□□□□ -1.25
CLSTN3-205ENST00000535452 SNRPEP62304 92 aaKnown RBP7.24□□□□□ -1.25
CLSTN3-205ENST00000535452 Q5XG85 94 aa7.23□□□□□ -1.25
CLSTN3-205ENST00000535452 COX6B2Q6YFQ2 88 aa7.23□□□□□ -1.25
CLSTN3-205ENST00000535452 MUSTN1Q8IVN3 82 aa7.22□□□□□ -1.25
CLSTN3-205ENST00000535452 KRTAP4-1Q9BYQ7 146 aa7.22□□□□□ -1.25
CLSTN3-205ENST00000535452 IGLV5-48A0A075B6I7 105 aa7.21□□□□□ -1.26
CLSTN3-205ENST00000535452 M0R2T5 61 aa7.21□□□□□ -1.26
CLSTN3-205ENST00000535452 SNCGO76070 127 aa7.2□□□□□ -1.26
CLSTN3-205ENST00000535452 S100A2P29034 98 aa7.19□□□□□ -1.26
CLSTN3-205ENST00000535452 Q6JHZ5 121 aa7.19□□□□□ -1.26
CLSTN3-205ENST00000535452 ATOH7Q8N100 152 aa7.19□□□□□ -1.26
CLSTN3-205ENST00000535452 ANKRD39Q53RE8 183 aa7.18□□□□□ -1.26
CLSTN3-205ENST00000535452 COA6Q5JTJ3 125 aaKnown RBP7.18□□□□□ -1.26
CLSTN3-205ENST00000535452 C1orf195Q5TG92 126 aa7.18□□□□□ -1.26
CLSTN3-205ENST00000535452 SMIM11BQ8TCY0 68 aa7.18□□□□□ -1.26
CLSTN3-205ENST00000535452 LCE2DQ5TA82 110 aaPredicted RBP7.17□□□□□ -1.26
CLSTN3-205ENST00000535452 SMIM29Q86T20 159 aa7.17□□□□□ -1.26
CLSTN3-205ENST00000535452 PCP2Q8IVA1 136 aa7.17□□□□□ -1.26
CLSTN3-205ENST00000535452 hADV29S1A0JD25 119 aa7.16□□□□□ -1.26
CLSTN3-205ENST00000535452 RPL37P61927 97 aaKnown RBP7.16□□□□□ -1.26
CLSTN3-205ENST00000535452 SCGB1D1O95968 90 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms