RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 FAM19A1Q7Z5A9 133 aa12.23□□□□□ -0.45
COPS7A-204ENST00000534947 SERTAD4-AS1Q5TG53 156 aa12.22□□□□□ -0.45
COPS7A-204ENST00000534947 MAST4O15021 2626 aa12.22□□□□□ -0.45
COPS7A-204ENST00000534947 PRYO14603 147 aa12.2□□□□□ -0.46
COPS7A-204ENST00000534947 DHRS4-AS1Q9P1J3 65 aa12.2□□□□□ -0.46
COPS7A-204ENST00000534947 K7EIL1 84 aa12.18□□□□□ -0.46
COPS7A-204ENST00000534947 HAMPP81172 84 aa12.18□□□□□ -0.46
COPS7A-204ENST00000534947 SPRR1AP35321 89 aa12.16□□□□□ -0.46
COPS7A-204ENST00000534947 Q6ZRX8 168 aa12.16□□□□□ -0.46
COPS7A-204ENST00000534947 IGLV1-50A0A075B6I6 118 aa12.15□□□□□ -0.46
COPS7A-204ENST00000534947 KRTAP4-16G5E9R7 235 aaPredicted RBP12.15□□□□□ -0.46
COPS7A-204ENST00000534947 SMIM20Q8N5G0 67 aa12.15□□□□□ -0.46
COPS7A-204ENST00000534947 LOC107984640A0A0U1RRK4 108 aa12.13□□□□□ -0.47
COPS7A-204ENST00000534947 CASC10Q5T4H9 136 aa12.13□□□□□ -0.47
COPS7A-204ENST00000534947 A0A1B0GW54 56 aa12.13□□□□□ -0.47
COPS7A-204ENST00000534947 BAHCC1Q9P281 2608 aa12.13□□□□□ -0.47
COPS7A-204ENST00000534947 IGLV5-48A0A075B6I7 105 aa12.12□□□□□ -0.47
COPS7A-204ENST00000534947 FLNBO75369 2602 aaKnown RBP12.12□□□□□ -0.47
COPS7A-204ENST00000534947 TMEM258P61165 79 aa12.11□□□□□ -0.47
COPS7A-204ENST00000534947 Q8N377 158 aa12.11□□□□□ -0.47
COPS7A-204ENST00000534947 PRB2P02812 416 aaPredicted RBP12.11□□□□□ -0.47
COPS7A-204ENST00000534947 TRAV7A0A075B6U4 112 aa12.1□□□□□ -0.47
COPS7A-204ENST00000534947 ETDCA0A1B0GVM5 59 aa12.1□□□□□ -0.47
COPS7A-204ENST00000534947 MRPL55Q7Z7F7 128 aaKnown RBP12.08□□□□□ -0.48
COPS7A-204ENST00000534947 NOTCH1P46531 2555 aa12.08□□□□□ -0.48
COPS7A-204ENST00000534947 FAM168BA1KXE4 195 aa12.08□□□□□ -0.48
COPS7A-204ENST00000534947 KRTAP7-1Q8IUC3 87 aa12.08□□□□□ -0.48
COPS7A-204ENST00000534947 Q9BRP9 147 aa12.07□□□□□ -0.48
COPS7A-204ENST00000534947 DNAH1Q9P2D7 4330 aa12.06□□□□□ -0.48
COPS7A-204ENST00000534947 RPL37AP8A6NKH3 93 aa12.06□□□□□ -0.48
COPS7A-204ENST00000534947 CYSTM1Q9H1C7 97 aa12.06□□□□□ -0.48
COPS7A-204ENST00000534947 RPS28P62857 69 aaKnown RBP12.04□□□□□ -0.48
COPS7A-204ENST00000534947 DEFB105AQ8NG35 78 aa12.04□□□□□ -0.48
COPS7A-204ENST00000534947 HUWE1Q7Z6Z7 4374 aaKnown RBP12.03□□□□□ -0.48
COPS7A-204ENST00000534947 TNP2Q05952 138 aa12.03□□□□□ -0.48
COPS7A-204ENST00000534947 NREPQ16612 68 aa12.03□□□□□ -0.48
COPS7A-204ENST00000534947 CNBPP62633 177 aaKnown RBP12.02□□□□□ -0.49
COPS7A-204ENST00000534947 FAM19A5Q7Z5A7 132 aaPredicted RBP12.02□□□□□ -0.49
COPS7A-204ENST00000534947 J3KT08 172 aa12.01□□□□□ -0.49
COPS7A-204ENST00000534947 FUSP35637 526 aaKnown RBP eCLIP12.01□□□□□ -0.49
COPS7A-204ENST00000534947 NBEAL1Q6ZS30 2694 aa12.01□□□□□ -0.49
COPS7A-204ENST00000534947 REG3GQ6UW15 175 aa12□□□□□ -0.49
COPS7A-204ENST00000534947 COL6A5A8TX70 2615 aa11.99□□□□□ -0.49
COPS7A-204ENST00000534947 C16orf90A8MZG2 172 aa11.99□□□□□ -0.49
COPS7A-204ENST00000534947 SCXQ7RTU7 201 aa11.98□□□□□ -0.49
COPS7A-204ENST00000534947 C20orf197Q8N268 126 aa11.97□□□□□ -0.49
COPS7A-204ENST00000534947 C14orf177Q52M58 125 aa11.96□□□□□ -0.49
COPS7A-204ENST00000534947 C1orf137Q5JT78 98 aa11.96□□□□□ -0.49
COPS7A-204ENST00000534947 KLKP1Q107X0 134 aa11.96□□□□□ -0.5
COPS7A-204ENST00000534947 KRTAP1-5Q9BYS1 174 aa11.96□□□□□ -0.5
COPS7A-204ENST00000534947 BPY2O14599 106 aa11.95□□□□□ -0.5
COPS7A-204ENST00000534947 IGKV4-1P06312 121 aa11.95□□□□□ -0.5
COPS7A-204ENST00000534947 UBE2BP63146 152 aa11.95□□□□□ -0.5
COPS7A-204ENST00000534947 Q8NBF4 154 aa11.95□□□□□ -0.5
COPS7A-204ENST00000534947 SPRR4Q96PI1 79 aa11.94□□□□□ -0.5
COPS7A-204ENST00000534947 A0A1W2PNM2 257 aa11.94□□□□□ -0.5
COPS7A-204ENST00000534947 C3orf84H3BNL1 204 aa11.94□□□□□ -0.5
COPS7A-204ENST00000534947 ST20-AS1Q8NBB2 130 aa11.94□□□□□ -0.5
COPS7A-204ENST00000534947 APLNQ9ULZ1 77 aa11.94□□□□□ -0.5
COPS7A-204ENST00000534947 PSCAO43653 123 aa11.93□□□□□ -0.5
COPS7A-204ENST00000534947 DPH3Q96FX2 82 aa11.93□□□□□ -0.5
COPS7A-204ENST00000534947 A0A096LNI7 61 aa11.92□□□□□ -0.5
COPS7A-204ENST00000534947 ERC2-IT1O76042 136 aa11.92□□□□□ -0.5
COPS7A-204ENST00000534947 UBE2DNLQ8IWF7 75 aa11.92□□□□□ -0.5
COPS7A-204ENST00000534947 PKIGQ9Y2B9 76 aa11.91□□□□□ -0.5
COPS7A-204ENST00000534947 SMIM29Q86T20 159 aa11.87□□□□□ -0.51
COPS7A-204ENST00000534947 B9D2Q9BPU9 175 aa11.87□□□□□ -0.51
COPS7A-204ENST00000534947 H7BZZ5 65 aa11.87□□□□□ -0.51
COPS7A-204ENST00000534947 F8WEM9 126 aa11.86□□□□□ -0.51
COPS7A-204ENST00000534947 NDUFC1O43677 76 aa11.86□□□□□ -0.51
COPS7A-204ENST00000534947 A0A1W2PNN7 141 aa11.86□□□□□ -0.51
COPS7A-204ENST00000534947 Q8N9L7 120 aa11.85□□□□□ -0.51
COPS7A-204ENST00000534947 IGLV8-61A0A075B6I0 122 aa11.84□□□□□ -0.51
COPS7A-204ENST00000534947 IGKV2-24A0A0C4DH68 120 aa11.84□□□□□ -0.51
COPS7A-204ENST00000534947 H0Y9J4 135 aa11.83□□□□□ -0.52
COPS7A-204ENST00000534947 MGAM2Q2M2H8 2515 aa11.83□□□□□ -0.52
COPS7A-204ENST00000534947 FAM236DA0A1B0GTK5 79 aa11.82□□□□□ -0.52
COPS7A-204ENST00000534947 FAM236CP0DP71 79 aa11.82□□□□□ -0.52
COPS7A-204ENST00000534947 OCR1Q9BZK8 76 aa11.82□□□□□ -0.52
COPS7A-204ENST00000534947 LINC00476Q8WZB0 136 aa11.82□□□□□ -0.52
COPS7A-204ENST00000534947 DYNC2H1Q8NCM8 4307 aaKnown RBP11.8□□□□□ -0.52
COPS7A-204ENST00000534947 C9orf163Q8N9P6 203 aa11.8□□□□□ -0.52
COPS7A-204ENST00000534947 STAB2Q8WWQ8 2551 aa11.8□□□□□ -0.52
COPS7A-204ENST00000534947 NUPR2A6NF83 97 aa11.79□□□□□ -0.52
COPS7A-204ENST00000534947 PRLHP81277 87 aa11.78□□□□□ -0.52
COPS7A-204ENST00000534947 LINC00474Q9P2X8 69 aa11.78□□□□□ -0.52
COPS7A-204ENST00000534947 SNURFQ9Y675 71 aa11.78□□□□□ -0.52
COPS7A-204ENST00000534947 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.77□□□□□ -0.52
COPS7A-204ENST00000534947 TMEM254Q8TBM7 123 aa11.77□□□□□ -0.52
COPS7A-204ENST00000534947 LRCOL1A6NCL2 159 aa11.77□□□□□ -0.53
COPS7A-204ENST00000534947 IGFL1Q6UW32 110 aa11.77□□□□□ -0.53
COPS7A-204ENST00000534947 NBDYA0A0U1RRE5 68 aa11.76□□□□□ -0.53
COPS7A-204ENST00000534947 COL7A1Q02388 2944 aa11.76□□□□□ -0.53
COPS7A-204ENST00000534947 SPRR1BP22528 89 aa11.76□□□□□ -0.53
COPS7A-204ENST00000534947 ATP5EP56381 51 aaPredicted RBP11.76□□□□□ -0.53
COPS7A-204ENST00000534947 HIGD2AQ9BW72 106 aa11.75□□□□□ -0.53
COPS7A-204ENST00000534947 DNAH9Q9NYC9 4486 aa11.75□□□□□ -0.53
COPS7A-204ENST00000534947 DSCR10P59022 87 aa11.74□□□□□ -0.53
COPS7A-204ENST00000534947 SERP1Q9Y6X1 66 aa11.73□□□□□ -0.53
COPS7A-204ENST00000534947 EPM2AB3EWF7 344 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms