RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 C7orf33Q8WU49 177 aa12.94□□□□□ -0.34
TNFRSF1A-205ENST00000534885 ANAPC13Q9BS18 74 aa12.93□□□□□ -0.34
TNFRSF1A-205ENST00000534885 A0A1W2PNN7 141 aa12.93□□□□□ -0.34
TNFRSF1A-205ENST00000534885 PANO1I0J062 215 aa12.92□□□□□ -0.34
TNFRSF1A-205ENST00000534885 C22orf24Q9Y442 160 aa12.92□□□□□ -0.34
TNFRSF1A-205ENST00000534885 IGLV5-52A0A0A0MRZ9 124 aa12.92□□□□□ -0.34
TNFRSF1A-205ENST00000534885 C6orf99Q4VX62 202 aa12.92□□□□□ -0.34
TNFRSF1A-205ENST00000534885 PKIGQ9Y2B9 76 aa12.92□□□□□ -0.34
TNFRSF1A-205ENST00000534885 TRAV23DV6A0A075B6W5 121 aa12.91□□□□□ -0.34
TNFRSF1A-205ENST00000534885 FAM218AQ96MZ4 157 aa12.91□□□□□ -0.34
TNFRSF1A-205ENST00000534885 DNAH11Q96DT5 4516 aa12.9□□□□□ -0.34
TNFRSF1A-205ENST00000534885 LST1O00453 97 aa12.9□□□□□ -0.34
TNFRSF1A-205ENST00000534885 H3BT86 120 aa12.89□□□□□ -0.35
TNFRSF1A-205ENST00000534885 KRTAP10-2P60368 255 aa12.89□□□□□ -0.35
TNFRSF1A-205ENST00000534885 MRPL55Q7Z7F7 128 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1A-205ENST00000534885 TEX49A0A1B0GTD5 131 aa12.88□□□□□ -0.35
TNFRSF1A-205ENST00000534885 RPL37AP8A6NKH3 93 aa12.88□□□□□ -0.35
TNFRSF1A-205ENST00000534885 LINC00167Q96N53 147 aa12.88□□□□□ -0.35
TNFRSF1A-205ENST00000534885 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-205ENST00000534885 KMT2CQ8NEZ4 4911 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1A-205ENST00000534885 B5MCH6 92 aa12.87□□□□□ -0.35
TNFRSF1A-205ENST00000534885 LINC00474Q9P2X8 69 aa12.87□□□□□ -0.35
TNFRSF1A-205ENST00000534885 H0YGX0 51 aa12.86□□□□□ -0.35
TNFRSF1A-205ENST00000534885 ZNF73O43830 326 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-205ENST00000534885 SMIM20Q8N5G0 67 aa12.86□□□□□ -0.35
TNFRSF1A-205ENST00000534885 A0A087WYN8 130 aa12.85□□□□□ -0.35
TNFRSF1A-205ENST00000534885 IGLV1-50A0A075B6I6 118 aa12.85□□□□□ -0.35
TNFRSF1A-205ENST00000534885 SPACA4Q8TDM5 124 aa12.85□□□□□ -0.35
TNFRSF1A-205ENST00000534885 DIRC1Q969H9 104 aa12.84□□□□□ -0.35
TNFRSF1A-205ENST00000534885 KCNQ1DNQ9H478 68 aa12.84□□□□□ -0.35
TNFRSF1A-205ENST00000534885 PKD1P98161 4303 aa12.84□□□□□ -0.35
TNFRSF1A-205ENST00000534885 DNAH5Q8TE73 4624 aa12.83□□□□□ -0.36
TNFRSF1A-205ENST00000534885 DPH3Q96FX2 82 aa12.82□□□□□ -0.36
TNFRSF1A-205ENST00000534885 RYR2Q92736 4967 aa12.82□□□□□ -0.36
TNFRSF1A-205ENST00000534885 PHF5AQ7RTV0 110 aaKnown RBP12.81□□□□□ -0.36
TNFRSF1A-205ENST00000534885 TRACP01848 142 aa12.79□□□□□ -0.36
TNFRSF1A-205ENST00000534885 SNCGO76070 127 aa12.78□□□□□ -0.36
TNFRSF1A-205ENST00000534885 PRYO14603 147 aa12.77□□□□□ -0.36
TNFRSF1A-205ENST00000534885 ELOF1P60002 83 aaKnown RBP12.77□□□□□ -0.36
TNFRSF1A-205ENST00000534885 LINC00575Q6W349 94 aa12.77□□□□□ -0.37
TNFRSF1A-205ENST00000534885 COX7BP24311 80 aa12.76□□□□□ -0.37
TNFRSF1A-205ENST00000534885 KRTAP11-1Q8IUC1 163 aa12.76□□□□□ -0.37
TNFRSF1A-205ENST00000534885 TRBV7-6A0A0J9YX20 115 aa12.75□□□□□ -0.37
TNFRSF1A-205ENST00000534885 EPM2AB3EWF7 344 aa12.74□□□□□ -0.37
TNFRSF1A-205ENST00000534885 KRTAP4-16G5E9R7 235 aaPredicted RBP12.74□□□□□ -0.37
TNFRSF1A-205ENST00000534885 SPRR1AP35321 89 aa12.74□□□□□ -0.37
TNFRSF1A-205ENST00000534885 FAM240AA0A1B0GVK7 77 aa12.73□□□□□ -0.37
TNFRSF1A-205ENST00000534885 DNAL4O96015 105 aa12.73□□□□□ -0.37
TNFRSF1A-205ENST00000534885 UBE2BP63146 152 aa12.73□□□□□ -0.37
TNFRSF1A-205ENST00000534885 C5orf47Q569G3 176 aa12.73□□□□□ -0.37
TNFRSF1A-205ENST00000534885 LINC00528Q8N1L1 170 aa12.73□□□□□ -0.37
TNFRSF1A-205ENST00000534885 REG3GQ6UW15 175 aa12.73□□□□□ -0.37
TNFRSF1A-205ENST00000534885 LINC00336Q6ZUF6 198 aa12.73□□□□□ -0.37
TNFRSF1A-205ENST00000534885 A0A1B0GX51 115 aa12.71□□□□□ -0.37
TNFRSF1A-205ENST00000534885 Q6Q795 121 aa12.71□□□□□ -0.37
TNFRSF1A-205ENST00000534885 FAM30AQ9NZY2 134 aa12.71□□□□□ -0.37
TNFRSF1A-205ENST00000534885 PKHD1P08F94 4074 aa12.71□□□□□ -0.37
TNFRSF1A-205ENST00000534885 DNAH8Q96JB1 4490 aa12.71□□□□□ -0.38
TNFRSF1A-205ENST00000534885 hADV29S1A0JD25 119 aa12.71□□□□□ -0.38
TNFRSF1A-205ENST00000534885 PLAC8Q9NZF1 115 aa12.71□□□□□ -0.38
TNFRSF1A-205ENST00000534885 NDUFV3P56181 108 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1A-205ENST00000534885 KRTAP10-1P60331 282 aa12.7□□□□□ -0.38
TNFRSF1A-205ENST00000534885 ETDCA0A1B0GVM5 59 aa12.69□□□□□ -0.38
TNFRSF1A-205ENST00000534885 Q6ZRX8 168 aa12.68□□□□□ -0.38
TNFRSF1A-205ENST00000534885 BAALC-AS2P0C853 105 aa12.67□□□□□ -0.38
TNFRSF1A-205ENST00000534885 Q9BRP9 147 aa12.65□□□□□ -0.38
TNFRSF1A-205ENST00000534885 CCDC179H3BU77 68 aa12.65□□□□□ -0.39
TNFRSF1A-205ENST00000534885 ACYP1P07311 99 aa12.65□□□□□ -0.39
TNFRSF1A-205ENST00000534885 Q6ZQY7 126 aa12.65□□□□□ -0.39
TNFRSF1A-205ENST00000534885 Q6ZSA8 131 aa12.65□□□□□ -0.39
TNFRSF1A-205ENST00000534885 A0A1B0GVY2 172 aa12.64□□□□□ -0.39
TNFRSF1A-205ENST00000534885 ORMDL1Q9P0S3 153 aa12.64□□□□□ -0.39
TNFRSF1A-205ENST00000534885 PRLHP81277 87 aa12.62□□□□□ -0.39
TNFRSF1A-205ENST00000534885 FAM19A1Q7Z5A9 133 aa12.62□□□□□ -0.39
TNFRSF1A-205ENST00000534885 CIRBP-AS1Q8TBR5 109 aa12.62□□□□□ -0.39
TNFRSF1A-205ENST00000534885 HAMPP81172 84 aa12.61□□□□□ -0.39
TNFRSF1A-205ENST00000534885 INAFM2P0DMQ5 153 aa12.6□□□□□ -0.39
TNFRSF1A-205ENST00000534885 SCXQ7RTU7 201 aa12.6□□□□□ -0.39
TNFRSF1A-205ENST00000534885 DHRS4-AS1Q9P1J3 65 aa12.6□□□□□ -0.39
TNFRSF1A-205ENST00000534885 RYR3Q15413 4870 aa12.59□□□□□ -0.39
TNFRSF1A-205ENST00000534885 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.58□□□□□ -0.39
TNFRSF1A-205ENST00000534885 ERC2-IT1O76042 136 aa12.58□□□□□ -0.4
TNFRSF1A-205ENST00000534885 TRBV7-7A0A0K0K1E9 115 aa12.57□□□□□ -0.4
TNFRSF1A-205ENST00000534885 SMCR5Q8TEV8 140 aa12.57□□□□□ -0.4
TNFRSF1A-205ENST00000534885 BCE1O60756 84 aa12.55□□□□□ -0.4
TNFRSF1A-205ENST00000534885 PSORS1C2Q9UIG4 136 aa12.55□□□□□ -0.4
TNFRSF1A-205ENST00000534885 LRP1BQ9NZR2 4599 aa12.55□□□□□ -0.4
TNFRSF1A-205ENST00000534885 TMEM256-PLSCR3K7ERE1 68 aa12.55□□□□□ -0.4
TNFRSF1A-205ENST00000534885 HIGD2AQ9BW72 106 aa12.54□□□□□ -0.4
TNFRSF1A-205ENST00000534885 UBE2AP49459 152 aa12.53□□□□□ -0.4
TNFRSF1A-205ENST00000534885 ST20-AS1Q8NBB2 130 aa12.53□□□□□ -0.4
TNFRSF1A-205ENST00000534885 SRRM2Q9UQ35 2752 aaKnown RBP12.52□□□□□ -0.41
TNFRSF1A-205ENST00000534885 H0Y9J4 135 aa12.52□□□□□ -0.41
TNFRSF1A-205ENST00000534885 LINC00643Q86TS7 51 aa12.52□□□□□ -0.41
TNFRSF1A-205ENST00000534885 KRTAP13-1Q8IUC0 172 aa12.51□□□□□ -0.41
TNFRSF1A-205ENST00000534885 IMUPQ9GZP8 106 aa12.51□□□□□ -0.41
TNFRSF1A-205ENST00000534885 DEFB105AQ8NG35 78 aa12.5□□□□□ -0.41
TNFRSF1A-205ENST00000534885 DYNC1H1Q14204 4646 aaKnown RBP12.5□□□□□ -0.41
TNFRSF1A-205ENST00000534885 LINC01547P58512 204 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1A-205ENST00000534885 C1orf137Q5JT78 98 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 201.2 ms