RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 PP6455Q8WZ26 134 aa-1.93□□□□□ -2.72
COPB1-212ENST00000534771 LSM10Q969L4 123 aaKnown RBP-1.93□□□□□ -2.72
COPB1-212ENST00000534771 PDCD10Q9BUL8 212 aa-1.93□□□□□ -2.72
COPB1-212ENST00000534771 SNRNP25Q9BV90 132 aaKnown RBP-1.93□□□□□ -2.72
COPB1-212ENST00000534771 GSKIPQ9P0R6 139 aa-1.93□□□□□ -2.72
COPB1-212ENST00000534771 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.93□□□□□ -2.72
COPB1-212ENST00000534771 A2ML1A8K2U0 1454 aa-1.94□□□□□ -2.72
COPB1-212ENST00000534771 A0A0G2JND7 137 aa-1.94□□□□□ -2.72
COPB1-212ENST00000534771 TRBV7-7A0A0K0K1E9 115 aa-1.94□□□□□ -2.72
COPB1-212ENST00000534771 M0R2Z0 102 aa-1.94□□□□□ -2.72
COPB1-212ENST00000534771 COMMD6Q7Z4G1 85 aa-1.94□□□□□ -2.72
COPB1-212ENST00000534771 TCEAL4Q96EI5 215 aa-1.94□□□□□ -2.72
COPB1-212ENST00000534771 SPANXDQ9BXN6 97 aa-1.94□□□□□ -2.72
COPB1-212ENST00000534771 PSENENQ9NZ42 101 aa-1.94□□□□□ -2.72
COPB1-212ENST00000534771 SCN11AQ9UI33 1791 aa-1.95□□□□□ -2.72
COPB1-212ENST00000534771 A8MTW9 85 aa-1.95□□□□□ -2.72
COPB1-212ENST00000534771 SCGB1A1P11684 91 aa-1.95□□□□□ -2.72
COPB1-212ENST00000534771 DPH3Q96FX2 82 aa-1.95□□□□□ -2.72
COPB1-212ENST00000534771 CCDC167Q9P0B6 97 aa-1.95□□□□□ -2.72
COPB1-212ENST00000534771 ZNF831Q5JPB2 1677 aa-1.96□□□□□ -2.72
COPB1-212ENST00000534771 PHLPP1O60346 1717 aa-1.96□□□□□ -2.72
COPB1-212ENST00000534771 H3BQF6 201 aa-1.96□□□□□ -2.72
COPB1-212ENST00000534771 COPZ1P61923 177 aa-1.96□□□□□ -2.72
COPB1-212ENST00000534771 Q56UQ5 140 aa-1.96□□□□□ -2.72
COPB1-212ENST00000534771 PPP3R2Q96LZ3 170 aa-1.96□□□□□ -2.72
COPB1-212ENST00000534771 LINC00474Q9P2X8 69 aa-1.96□□□□□ -2.72
COPB1-212ENST00000534771 SERP1Q9Y6X1 66 aa-1.96□□□□□ -2.72
COPB1-212ENST00000534771 MAST1Q9Y2H9 1570 aa-1.97□□□□□ -2.72
COPB1-212ENST00000534771 H0Y9P7 68 aa-1.97□□□□□ -2.72
COPB1-212ENST00000534771 COX6CP09669 75 aa-1.97□□□□□ -2.72
COPB1-212ENST00000534771 TRAPPC2P0DI81 140 aa-1.97□□□□□ -2.72
COPB1-212ENST00000534771 TRAPPC2BP0DI82 140 aa-1.97□□□□□ -2.72
COPB1-212ENST00000534771 GNGT1P63211 74 aa-1.97□□□□□ -2.72
COPB1-212ENST00000534771 COX6B2Q6YFQ2 88 aa-1.97□□□□□ -2.72
COPB1-212ENST00000534771 RERGLQ9H628 205 aa-1.97□□□□□ -2.72
COPB1-212ENST00000534771 GRIN2AQ12879 1464 aa-1.97□□□□□ -2.72
COPB1-212ENST00000534771 SHPRHQ149N8 1683 aa-1.97□□□□□ -2.73
COPB1-212ENST00000534771 PIK3C2BO00750 1634 aa-1.98□□□□□ -2.73
COPB1-212ENST00000534771 ABCC5O15440 1437 aa-1.98□□□□□ -2.73
COPB1-212ENST00000534771 MIF4GDA9UHW6 222 aaKnown RBP-1.98□□□□□ -2.73
COPB1-212ENST00000534771 NDUFA3O95167 84 aa-1.98□□□□□ -2.73
COPB1-212ENST00000534771 FABP1P07148 127 aa-1.98□□□□□ -2.73
COPB1-212ENST00000534771 ARMS2P0C7Q2 107 aa-1.98□□□□□ -2.73
COPB1-212ENST00000534771 SFTA2Q6UW10 78 aa-1.98□□□□□ -2.73
COPB1-212ENST00000534771 SMIM15Q7Z3B0 74 aa-1.98□□□□□ -2.73
COPB1-212ENST00000534771 DEFB107AQ8IZN7 70 aa-1.98□□□□□ -2.73
COPB1-212ENST00000534771 C8orf59Q8N0T1 100 aaPredicted RBP-1.98□□□□□ -2.73
COPB1-212ENST00000534771 DEFB106AQ8N104 65 aa-1.98□□□□□ -2.73
COPB1-212ENST00000534771 CDC26Q8NHZ8 85 aa-1.98□□□□□ -2.73
COPB1-212ENST00000534771 MANBALQ9NQG1 85 aa-1.98□□□□□ -2.73
COPB1-212ENST00000534771 UBE2D4Q9Y2X8 147 aa-1.98□□□□□ -2.73
COPB1-212ENST00000534771 PLXNC1O60486 1568 aa-1.98□□□□□ -2.73
COPB1-212ENST00000534771 UTRNP46939 3433 aa-1.99□□□□□ -2.73
COPB1-212ENST00000534771 RPS25P62851 125 aaKnown RBP-1.99□□□□□ -2.73
COPB1-212ENST00000534771 TSTD1Q8NFU3 115 aa-1.99□□□□□ -2.73
COPB1-212ENST00000534771 C12orf57Q99622 126 aa-1.99□□□□□ -2.73
COPB1-212ENST00000534771 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.99□□□□□ -2.73
COPB1-212ENST00000534771 ROBO1Q9Y6N7 1651 aa-1.99□□□□□ -2.73
COPB1-212ENST00000534771 QSER1Q2KHR3 1735 aa-2□□□□□ -2.73
COPB1-212ENST00000534771 MON2Q7Z3U7 1717 aa-2□□□□□ -2.73
COPB1-212ENST00000534771 RGPD8O14715 1765 aaPredicted RBP-2□□□□□ -2.73
COPB1-212ENST00000534771 RGPD5Q99666 1765 aa-2□□□□□ -2.73
COPB1-212ENST00000534771 KIF20BQ96Q89 1820 aa-2□□□□□ -2.73
COPB1-212ENST00000534771 DNMBPQ6XZF7 1577 aa-2□□□□□ -2.73
COPB1-212ENST00000534771 F6UZH7 168 aa-2□□□□□ -2.73
COPB1-212ENST00000534771 NBEAP1P0C6P0 100 aa-2□□□□□ -2.73
COPB1-212ENST00000534771 Q0VG73 95 aa-2□□□□□ -2.73
COPB1-212ENST00000534771 C5P01031 1676 aa-2□□□□□ -2.73
COPB1-212ENST00000534771 PKD1L3Q7Z443 1732 aa-2□□□□□ -2.73
COPB1-212ENST00000534771 CKS1BP61024 79 aa-2.01□□□□□ -2.73
COPB1-212ENST00000534771 LEAP2Q969E1 77 aa-2.01□□□□□ -2.73
COPB1-212ENST00000534771 PRO1854Q9UHT4 67 aa-2.01□□□□□ -2.73
COPB1-212ENST00000534771 ATP7BP35670 1465 aa-2.01□□□□□ -2.73
COPB1-212ENST00000534771 SAMD9Q5K651 1589 aa-2.02□□□□□ -2.73
COPB1-212ENST00000534771 CUL7Q14999 1698 aa-2.02□□□□□ -2.73
COPB1-212ENST00000534771 TOGARAM1Q9Y4F4 1720 aa-2.02□□□□□ -2.73
COPB1-212ENST00000534771 IGLV5-48A0A075B6I7 105 aa-2.02□□□□□ -2.73
COPB1-212ENST00000534771 M0QZ58 72 aa-2.02□□□□□ -2.73
COPB1-212ENST00000534771 GNG11P61952 73 aa-2.02□□□□□ -2.73
COPB1-212ENST00000534771 HSD52Q0P140 79 aa-2.02□□□□□ -2.73
COPB1-212ENST00000534771 SMIM21Q3B7S5 101 aa-2.02□□□□□ -2.73
COPB1-212ENST00000534771 TOPAZ1Q8N9V7 1692 aa-2.02□□□□□ -2.73
COPB1-212ENST00000534771 ANKRD36CQ5JPF3 1778 aa-2.03□□□□□ -2.73
COPB1-212ENST00000534771 C7orf77A4D0Y5 90 aa-2.03□□□□□ -2.73
COPB1-212ENST00000534771 K7EP13 123 aa-2.03□□□□□ -2.73
COPB1-212ENST00000534771 UBE2L3P68036 154 aaKnown RBP-2.03□□□□□ -2.73
COPB1-212ENST00000534771 CATR1Q13166 79 aa-2.03□□□□□ -2.73
COPB1-212ENST00000534771 PSMG4Q5JS54 123 aa-2.03□□□□□ -2.73
COPB1-212ENST00000534771 VAMP8Q9BV40 100 aa-2.03□□□□□ -2.73
COPB1-212ENST00000534771 AP4S1Q9Y587 144 aa-2.03□□□□□ -2.73
COPB1-212ENST00000534771 ATP10BO94823 1461 aa-2.03□□□□□ -2.73
COPB1-212ENST00000534771 LY75O60449 1722 aa-2.03□□□□□ -2.73
COPB1-212ENST00000534771 UBE2L5PA0A1B0GUS4 154 aa-2.04□□□□□ -2.74
COPB1-212ENST00000534771 XIRP2A4UGR9 3374 aa-2.04□□□□□ -2.74
COPB1-212ENST00000534771 RGPD3A6NKT7 1758 aaPredicted RBP-2.04□□□□□ -2.74
COPB1-212ENST00000534771 POLR1AO95602 1720 aaPredicted RBP-2.04□□□□□ -2.74
COPB1-212ENST00000534771 MT-ATP8P03928 68 aa-2.04□□□□□ -2.74
COPB1-212ENST00000534771 RGPD4Q7Z3J3 1758 aa-2.04□□□□□ -2.74
COPB1-212ENST00000534771 UBR1Q8IWV7 1749 aa-2.04□□□□□ -2.74
COPB1-212ENST00000534771 USP32Q8NFA0 1604 aa-2.04□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms