RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 GVQW2A0A096LPI5 108 aaPredicted RBP11.6□□□□□ -0.55
PHRF1-206ENST00000534320 KRTAP10-11P60412 298 aa11.6□□□□□ -0.55
PHRF1-206ENST00000534320 AKAP13Q12802 2813 aa11.6□□□□□ -0.55
PHRF1-206ENST00000534320 KTN1-AS1Q86SY8 53 aa11.58□□□□□ -0.56
PHRF1-206ENST00000534320 EIF4EBP3O60516 100 aaPredicted RBP11.57□□□□□ -0.56
PHRF1-206ENST00000534320 DNAH10OSP0CZ25 163 aa11.57□□□□□ -0.56
PHRF1-206ENST00000534320 LCA10Q71F78 164 aa11.57□□□□□ -0.56
PHRF1-206ENST00000534320 Q8NBF4 154 aa11.57□□□□□ -0.56
PHRF1-206ENST00000534320 CFAP46Q8IYW2 2715 aa11.56□□□□□ -0.56
PHRF1-206ENST00000534320 HELZ2Q9BYK8 2649 aaKnown RBP11.56□□□□□ -0.56
PHRF1-206ENST00000534320 SZT2Q5T011 3432 aa11.56□□□□□ -0.56
PHRF1-206ENST00000534320 KLKP1Q107X0 134 aa11.56□□□□□ -0.56
PHRF1-206ENST00000534320 LOC101927531A0A1B0GV80 90 aa11.54□□□□□ -0.56
PHRF1-206ENST00000534320 VPS13AQ96RL7 3174 aa11.54□□□□□ -0.56
PHRF1-206ENST00000534320 Q6ZRP5 223 aa11.53□□□□□ -0.56
PHRF1-206ENST00000534320 PRR34Q9NV39 138 aa11.53□□□□□ -0.56
PHRF1-206ENST00000534320 UQCR11O14957 56 aa11.52□□□□□ -0.57
PHRF1-206ENST00000534320 Q6ZRX8 168 aa11.52□□□□□ -0.57
PHRF1-206ENST00000534320 SSBP3-AS1Q7Z2R9 100 aa11.51□□□□□ -0.57
PHRF1-206ENST00000534320 NBDYA0A0U1RRE5 68 aa11.51□□□□□ -0.57
PHRF1-206ENST00000534320 COA5Q86WW8 74 aa11.51□□□□□ -0.57
PHRF1-206ENST00000534320 IGLV6-57P01721 117 aa11.51□□□□□ -0.57
PHRF1-206ENST00000534320 K7EIL1 84 aa11.49□□□□□ -0.57
PHRF1-206ENST00000534320 C16orf90A8MZG2 172 aa11.48□□□□□ -0.57
PHRF1-206ENST00000534320 LINC01600Q96MT4 127 aa11.47□□□□□ -0.57
PHRF1-206ENST00000534320 IGLV8-61A0A075B6I0 122 aa11.47□□□□□ -0.57
PHRF1-206ENST00000534320 WIPF1O43516 503 aa11.47□□□□□ -0.57
PHRF1-206ENST00000534320 DSPP15924 2871 aaKnown RBP11.47□□□□□ -0.57
PHRF1-206ENST00000534320 PHF5AQ7RTV0 110 aaKnown RBP11.46□□□□□ -0.57
PHRF1-206ENST00000534320 USP24Q9UPU5 2620 aa11.46□□□□□ -0.57
PHRF1-206ENST00000534320 ATRQ13535 2644 aa11.45□□□□□ -0.58
PHRF1-206ENST00000534320 LAMA1P25391 3075 aa11.44□□□□□ -0.58
PHRF1-206ENST00000534320 TRBV7-4A0A0J9YYF1 115 aa11.44□□□□□ -0.58
PHRF1-206ENST00000534320 LINC00476Q8WZB0 136 aa11.43□□□□□ -0.58
PHRF1-206ENST00000534320 H7BZZ5 65 aa11.43□□□□□ -0.58
PHRF1-206ENST00000534320 MGAM2Q2M2H8 2515 aa11.43□□□□□ -0.58
PHRF1-206ENST00000534320 ST20-AS1Q8NBB2 130 aa11.42□□□□□ -0.58
PHRF1-206ENST00000534320 C15orf56Q8N910 161 aa11.41□□□□□ -0.58
PHRF1-206ENST00000534320 FAM168BA1KXE4 195 aa11.41□□□□□ -0.58
PHRF1-206ENST00000534320 MOBPQ13875 183 aa11.4□□□□□ -0.58
PHRF1-206ENST00000534320 CHTF8P0CG12 524 aa11.39□□□□□ -0.59
PHRF1-206ENST00000534320 EPM2AB3EWF7 344 aa11.39□□□□□ -0.59
PHRF1-206ENST00000534320 MIR22HGQ0VDD5 57 aa11.39□□□□□ -0.59
PHRF1-206ENST00000534320 RTL8CO15255 209 aa11.39□□□□□ -0.59
PHRF1-206ENST00000534320 PLA2G1BP04054 148 aaKnown RBP11.38□□□□□ -0.59
PHRF1-206ENST00000534320 CR1P17927 2039 aa11.37□□□□□ -0.59
PHRF1-206ENST00000534320 KCNQ1DNQ9H478 68 aa11.36□□□□□ -0.59
PHRF1-206ENST00000534320 CRIPTQ9P021 101 aa11.36□□□□□ -0.59
PHRF1-206ENST00000534320 PRR15Q8IV56 129 aa11.36□□□□□ -0.59
PHRF1-206ENST00000534320 IGLV1-50A0A075B6I6 118 aa11.35□□□□□ -0.59
PHRF1-206ENST00000534320 LINC00528Q8N1L1 170 aa11.35□□□□□ -0.59
PHRF1-206ENST00000534320 VCANP13611 3396 aa11.34□□□□□ -0.59
PHRF1-206ENST00000534320 A8MWP4 228 aa11.34□□□□□ -0.59
PHRF1-206ENST00000534320 RPL37AP61513 92 aaKnown RBP11.33□□□□□ -0.6
PHRF1-206ENST00000534320 K7EQZ3 153 aa11.33□□□□□ -0.6
PHRF1-206ENST00000534320 DNAH14Q0VDD8 3507 aa11.32□□□□□ -0.6
PHRF1-206ENST00000534320 LINC00313P59037 77 aa11.32□□□□□ -0.6
PHRF1-206ENST00000534320 MAST4O15021 2626 aa11.32□□□□□ -0.6
PHRF1-206ENST00000534320 FAM229AH3BQW9 127 aa11.31□□□□□ -0.6
PHRF1-206ENST00000534320 C9orf129Q5T035 196 aaKnown RBP11.31□□□□□ -0.6
PHRF1-206ENST00000534320 FAM104AQ969W3 186 aa11.31□□□□□ -0.6
PHRF1-206ENST00000534320 IGSF10Q6WRI0 2623 aa11.29□□□□□ -0.6
PHRF1-206ENST00000534320 MRPL34Q9BQ48 92 aaKnown RBP11.28□□□□□ -0.6
PHRF1-206ENST00000534320 CDC42SE1Q9NRR8 79 aa11.27□□□□□ -0.6
PHRF1-206ENST00000534320 CELSR3Q9NYQ7 3312 aa11.27□□□□□ -0.61
PHRF1-206ENST00000534320 SPACA4Q8TDM5 124 aa11.27□□□□□ -0.61
PHRF1-206ENST00000534320 MAP1AP78559 2803 aaPredicted RBP11.27□□□□□ -0.61
PHRF1-206ENST00000534320 FRYQ5TBA9 3013 aa11.26□□□□□ -0.61
PHRF1-206ENST00000534320 TLX1NBP0CAT3 122 aa11.26□□□□□ -0.61
PHRF1-206ENST00000534320 WWC2-AS2Q96NR7 200 aa11.25□□□□□ -0.61
PHRF1-206ENST00000534320 PLA2G2DQ9UNK4 145 aa11.22□□□□□ -0.61
PHRF1-206ENST00000534320 CASC10Q5T4H9 136 aa11.21□□□□□ -0.62
PHRF1-206ENST00000534320 SPANXA2-OT1Q8N9U9 137 aa11.19□□□□□ -0.62
PHRF1-206ENST00000534320 Q8N377 158 aa11.19□□□□□ -0.62
PHRF1-206ENST00000534320 C9orf163Q8N9P6 203 aa11.17□□□□□ -0.62
PHRF1-206ENST00000534320 APLNQ9ULZ1 77 aa11.17□□□□□ -0.62
PHRF1-206ENST00000534320 RBM12B-AS1Q9P1G2 102 aa11.16□□□□□ -0.62
PHRF1-206ENST00000534320 Q1T7F1 81 aa11.16□□□□□ -0.62
PHRF1-206ENST00000534320 CHD6Q8TD26 2715 aa11.14□□□□□ -0.63
PHRF1-206ENST00000534320 IGFL1Q6UW32 110 aa11.14□□□□□ -0.63
PHRF1-206ENST00000534320 A0A087WTM6 91 aa11.13□□□□□ -0.63
PHRF1-206ENST00000534320 UNC79Q9P2D8 2635 aa11.13□□□□□ -0.63
PHRF1-206ENST00000534320 H3BS24 57 aa11.12□□□□□ -0.63
PHRF1-206ENST00000534320 C8orf17Q9NRJ1 99 aa11.12□□□□□ -0.63
PHRF1-206ENST00000534320 CNBPP62633 177 aaKnown RBP11.11□□□□□ -0.63
PHRF1-206ENST00000534320 A0A1W2PNN7 141 aa11.1□□□□□ -0.63
PHRF1-206ENST00000534320 COL6A3P12111 3177 aa11.1□□□□□ -0.63
PHRF1-206ENST00000534320 TNRC18O15417 2968 aaPredicted RBP11.09□□□□□ -0.63
PHRF1-206ENST00000534320 Q96NJ1 140 aa11.08□□□□□ -0.64
PHRF1-206ENST00000534320 TEP1Q99973 2627 aaKnown RBP11.08□□□□□ -0.64
PHRF1-206ENST00000534320 TYMSOSQ8TAI1 123 aa11.07□□□□□ -0.64
PHRF1-206ENST00000534320 BOD1L1Q8NFC6 3051 aa11.06□□□□□ -0.64
PHRF1-206ENST00000534320 SPTBN5Q9NRC6 3674 aaKnown RBP11.06□□□□□ -0.64
PHRF1-206ENST00000534320 LINC01554Q52M75 96 aa11.05□□□□□ -0.64
PHRF1-206ENST00000534320 TEX15Q9BXT5 2789 aa11.05□□□□□ -0.64
PHRF1-206ENST00000534320 LUZP6Q538Z0 58 aa11.05□□□□□ -0.64
PHRF1-206ENST00000534320 IGLV5-37A0A075B6J1 123 aa11.04□□□□□ -0.64
PHRF1-206ENST00000534320 ZNF861PO60384 105 aa11.04□□□□□ -0.64
PHRF1-206ENST00000534320 A0A0G2JQZ4 141 aa11.04□□□□□ -0.64
PHRF1-206ENST00000534320 OBSCN-AS1Q96MR7 158 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 322.6 ms