RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 LOC107984156A0A0G2JMH3 177 aa8.19□□□□□ -1.1
SHARPIN-208ENST00000533948 TRBV10-3A0A0K0K1G6 114 aa8.19□□□□□ -1.1
SHARPIN-208ENST00000533948 LINC01547P58512 204 aaPredicted RBP8.19□□□□□ -1.1
SHARPIN-208ENST00000533948 C4orf48Q5BLP8 95 aa8.19□□□□□ -1.1
SHARPIN-208ENST00000533948 ARL17AQ8IVW1 177 aa8.19□□□□□ -1.1
SHARPIN-208ENST00000533948 C3orf22Q8N5N4 141 aa8.19□□□□□ -1.1
SHARPIN-208ENST00000533948 SPRR4Q96PI1 79 aa8.19□□□□□ -1.1
SHARPIN-208ENST00000533948 KRTAP4-16G5E9R7 235 aaPredicted RBP8.18□□□□□ -1.1
SHARPIN-208ENST00000533948 SCGB1D1O95968 90 aa8.18□□□□□ -1.1
SHARPIN-208ENST00000533948 ETDCA0A1B0GVM5 59 aa8.17□□□□□ -1.1
SHARPIN-208ENST00000533948 HSBP1L1C9JCN9 74 aa8.17□□□□□ -1.1
SHARPIN-208ENST00000533948 FP248Q71RG6 208 aaPredicted RBP8.17□□□□□ -1.1
SHARPIN-208ENST00000533948 NPC2P61916 151 aa8.16□□□□□ -1.1
SHARPIN-208ENST00000533948 SMCR5Q8TEV8 140 aa8.16□□□□□ -1.1
SHARPIN-208ENST00000533948 TRBV10-2A0A0K0K1G8 114 aa8.15□□□□□ -1.1
SHARPIN-208ENST00000533948 S100A7L2Q5SY68 101 aa8.15□□□□□ -1.1
SHARPIN-208ENST00000533948 KRTAP4-1Q9BYQ7 146 aa8.15□□□□□ -1.1
SHARPIN-208ENST00000533948 ZNF706Q9Y5V0 76 aaPredicted RBP8.15□□□□□ -1.1
SHARPIN-208ENST00000533948 ZNF815PA8K554 130 aa8.14□□□□□ -1.11
SHARPIN-208ENST00000533948 DDTP30046 118 aa8.14□□□□□ -1.11
SHARPIN-208ENST00000533948 ASB16-AS1Q495Z4 193 aa8.14□□□□□ -1.11
SHARPIN-208ENST00000533948 ANKRD39Q53RE8 183 aa8.14□□□□□ -1.11
SHARPIN-208ENST00000533948 A0A0J9YXY3 114 aa8.13□□□□□ -1.11
SHARPIN-208ENST00000533948 B5MCH6 92 aa8.13□□□□□ -1.11
SHARPIN-208ENST00000533948 ADAMTSL4-AS1Q5T5F5 129 aa8.13□□□□□ -1.11
SHARPIN-208ENST00000533948 SOSTDC1Q6X4U4 206 aa8.13□□□□□ -1.11
SHARPIN-208ENST00000533948 SPANXB1Q9NS25 103 aaPredicted RBP8.13□□□□□ -1.11
SHARPIN-208ENST00000533948 EIF4EBP3O60516 100 aaPredicted RBP8.12□□□□□ -1.11
SHARPIN-208ENST00000533948 NDUFC2O95298 119 aa8.11□□□□□ -1.11
SHARPIN-208ENST00000533948 SEC61BP60468 96 aaKnown RBP8.11□□□□□ -1.11
SHARPIN-208ENST00000533948 TTTY13Q9BZ97 58 aa8.11□□□□□ -1.11
SHARPIN-208ENST00000533948 TIMM17BO60830 172 aa8.1□□□□□ -1.11
SHARPIN-208ENST00000533948 ERC2-IT1O76042 136 aa8.1□□□□□ -1.11
SHARPIN-208ENST00000533948 IGLV6-57P01721 117 aa8.1□□□□□ -1.11
SHARPIN-208ENST00000533948 JOSD1Q15040 202 aaPredicted RBP8.1□□□□□ -1.11
SHARPIN-208ENST00000533948 KRTAP13-3Q3SY46 172 aa8.1□□□□□ -1.11
SHARPIN-208ENST00000533948 SCGB1D4Q6XE38 83 aa8.1□□□□□ -1.11
SHARPIN-208ENST00000533948 LINC00483Q53H64 154 aa8.09□□□□□ -1.11
SHARPIN-208ENST00000533948 OR13C6PQ8NH95 151 aa8.09□□□□□ -1.11
SHARPIN-208ENST00000533948 Q9BRP9 147 aa8.09□□□□□ -1.11
SHARPIN-208ENST00000533948 GAGE2AQ6NT46 116 aa8.08□□□□□ -1.12
SHARPIN-208ENST00000533948 Q6ZRX8 168 aa8.08□□□□□ -1.12
SHARPIN-208ENST00000533948 PCP2Q8IVA1 136 aa8.08□□□□□ -1.12
SHARPIN-208ENST00000533948 Q8NBF4 154 aa8.08□□□□□ -1.12
SHARPIN-208ENST00000533948 SPINK1P00995 79 aa8.07□□□□□ -1.12
SHARPIN-208ENST00000533948 LITAFQ99732 161 aa8.07□□□□□ -1.12
SHARPIN-208ENST00000533948 TRAV23DV6A0A075B6W5 121 aa8.06□□□□□ -1.12
SHARPIN-208ENST00000533948 HINT1P49773 126 aaPredicted RBP8.06□□□□□ -1.12
SHARPIN-208ENST00000533948 VAMP8Q9BV40 100 aa8.06□□□□□ -1.12
SHARPIN-208ENST00000533948 LINC00308Q8TCZ7 52 aa8.05□□□□□ -1.12
SHARPIN-208ENST00000533948 ZNF73O43830 326 aaPredicted RBP8.04□□□□□ -1.12
SHARPIN-208ENST00000533948 PYY3Q5JQD4 70 aa8.04□□□□□ -1.12
SHARPIN-208ENST00000533948 COPS9Q8WXC6 57 aa8.04□□□□□ -1.12
SHARPIN-208ENST00000533948 PAM16Q9Y3D7 125 aa8.04□□□□□ -1.12
SHARPIN-208ENST00000533948 IGLV9-49A0A0B4J1Y8 123 aa8.03□□□□□ -1.12
SHARPIN-208ENST00000533948 MOBPQ13875 183 aa8.03□□□□□ -1.12
SHARPIN-208ENST00000533948 SPATA45Q537H7 98 aa8.03□□□□□ -1.12
SHARPIN-208ENST00000533948 SPANXDQ9BXN6 97 aa8.03□□□□□ -1.12
SHARPIN-208ENST00000533948 SPANXCQ9NY87 97 aa8.03□□□□□ -1.12
SHARPIN-208ENST00000533948 CBY1Q9Y3M2 126 aa8.03□□□□□ -1.12
SHARPIN-208ENST00000533948 COX8AP10176 69 aa8.02□□□□□ -1.13
SHARPIN-208ENST00000533948 Q6ZVH6 145 aa8.02□□□□□ -1.13
SHARPIN-208ENST00000533948 DLEU1O43261 78 aa8□□□□□ -1.13
SHARPIN-208ENST00000533948 IFITM1P13164 125 aa8□□□□□ -1.13
SHARPIN-208ENST00000533948 SSBP3-AS1Q7Z2R9 100 aa8□□□□□ -1.13
SHARPIN-208ENST00000533948 ST20-AS1Q8NBB2 130 aa8□□□□□ -1.13
SHARPIN-208ENST00000533948 LCE2CQ5TA81 110 aa7.99□□□□□ -1.13
SHARPIN-208ENST00000533948 SLC25A34Q6PIV7 304 aa7.98□□□□□ -1.13
SHARPIN-208ENST00000533948 LINC00518Q8N0U6 118 aa7.98□□□□□ -1.13
SHARPIN-208ENST00000533948 C14orf144Q96I85 54 aa7.98□□□□□ -1.13
SHARPIN-208ENST00000533948 SLC25A20O43772 301 aa7.97□□□□□ -1.13
SHARPIN-208ENST00000533948 RPS29P62273 56 aaKnown RBP7.97□□□□□ -1.13
SHARPIN-208ENST00000533948 C9orf153Q5TBE3 101 aa7.97□□□□□ -1.13
SHARPIN-208ENST00000533948 MUSTN1Q8IVN3 82 aa7.95□□□□□ -1.14
SHARPIN-208ENST00000533948 Q8N377 158 aa7.95□□□□□ -1.14
SHARPIN-208ENST00000533948 A6NDN8 102 aa7.94□□□□□ -1.14
SHARPIN-208ENST00000533948 XP32Q5T750 250 aa7.94□□□□□ -1.14
SHARPIN-208ENST00000533948 COX7BP24311 80 aa7.93□□□□□ -1.14
SHARPIN-208ENST00000533948 KRTAP19-2Q3LHN2 52 aa7.93□□□□□ -1.14
SHARPIN-208ENST00000533948 C6orf99Q4VX62 202 aa7.93□□□□□ -1.14
SHARPIN-208ENST00000533948 HIST1H4GQ99525 98 aa7.93□□□□□ -1.14
SHARPIN-208ENST00000533948 DHRS4-AS1Q9P1J3 65 aa7.93□□□□□ -1.14
SHARPIN-208ENST00000533948 HIGD1BQ9P298 99 aa7.93□□□□□ -1.14
SHARPIN-208ENST00000533948 SMIM6P0DI80 62 aa7.92□□□□□ -1.14
SHARPIN-208ENST00000533948 ELOF1P60002 83 aaKnown RBP7.92□□□□□ -1.14
SHARPIN-208ENST00000533948 DEFB105AQ8NG35 78 aa7.92□□□□□ -1.14
SHARPIN-208ENST00000533948 SPRR1BP22528 89 aa7.91□□□□□ -1.14
SHARPIN-208ENST00000533948 MT1HP80294 61 aa7.91□□□□□ -1.14
SHARPIN-208ENST00000533948 TAL2Q16559 108 aa7.91□□□□□ -1.14
SHARPIN-208ENST00000533948 LOC105371267A0A1B0GV96 52 aa7.89□□□□□ -1.15
SHARPIN-208ENST00000533948 CFC1BP0CG36 223 aa7.89□□□□□ -1.15
SHARPIN-208ENST00000533948 C2orf91Q6ZV80 131 aa7.89□□□□□ -1.15
SHARPIN-208ENST00000533948 UQCR10Q9UDW1 63 aa7.89□□□□□ -1.15
SHARPIN-208ENST00000533948 LAMTOR3Q9UHA4 124 aa7.89□□□□□ -1.15
SHARPIN-208ENST00000533948 TRAV13-2A0A0B4J235 113 aa7.88□□□□□ -1.15
SHARPIN-208ENST00000533948 TRBV7-6A0A0J9YX20 115 aa7.87□□□□□ -1.15
SHARPIN-208ENST00000533948 A4D1N5 150 aa7.87□□□□□ -1.15
SHARPIN-208ENST00000533948 HRCT1Q6UXD1 115 aa7.87□□□□□ -1.15
SHARPIN-208ENST00000533948 IGLV8-61A0A075B6I0 122 aa7.84□□□□□ -1.15
SHARPIN-208ENST00000533948 A0A1B0GWB2 263 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms