RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 TSTD3H0UI37 97 aa10.68□□□□□ -0.7
NXF1-216ENST00000533499 RPL28P46779 137 aaKnown RBP10.68□□□□□ -0.7
NXF1-216ENST00000533499 CBY1Q9Y3M2 126 aa10.68□□□□□ -0.7
NXF1-216ENST00000533499 RAB37Q96AX2 223 aa10.67□□□□□ -0.7
NXF1-216ENST00000533499 ZNF73O43830 326 aaPredicted RBP10.66□□□□□ -0.7
NXF1-216ENST00000533499 ZNF861PO60384 105 aa10.66□□□□□ -0.7
NXF1-216ENST00000533499 TMEM238LA0A1B0GVL6 79 aa10.65□□□□□ -0.7
NXF1-216ENST00000533499 A6NJY4 79 aa10.65□□□□□ -0.7
NXF1-216ENST00000533499 H7C2G1 150 aa10.65□□□□□ -0.7
NXF1-216ENST00000533499 RPL13AP40429 203 aaKnown RBP10.65□□□□□ -0.7
NXF1-216ENST00000533499 SPINK6Q6UWN8 80 aa10.65□□□□□ -0.7
NXF1-216ENST00000533499 ABCA13Q86UQ4 5058 aa10.65□□□□□ -0.7
NXF1-216ENST00000533499 HINT1P49773 126 aaPredicted RBP10.64□□□□□ -0.71
NXF1-216ENST00000533499 FXYD2P54710 66 aa10.64□□□□□ -0.71
NXF1-216ENST00000533499 DIRC1Q969H9 104 aa10.64□□□□□ -0.71
NXF1-216ENST00000533499 HIGD2AQ9BW72 106 aa10.64□□□□□ -0.71
NXF1-216ENST00000533499 FLG2Q5D862 2391 aaPredicted RBP10.63□□□□□ -0.71
NXF1-216ENST00000533499 CFC1BP0CG36 223 aa10.62□□□□□ -0.71
NXF1-216ENST00000533499 CFC1P0CG37 223 aa10.62□□□□□ -0.71
NXF1-216ENST00000533499 SPRR1AP35321 89 aa10.62□□□□□ -0.71
NXF1-216ENST00000533499 CTAG1AP78358 180 aa10.62□□□□□ -0.71
NXF1-216ENST00000533499 C6orf99Q4VX62 202 aa10.62□□□□□ -0.71
NXF1-216ENST00000533499 NHP2Q9NX24 153 aaKnown RBP10.61□□□□□ -0.71
NXF1-216ENST00000533499 B5MCH6 92 aa10.6□□□□□ -0.71
NXF1-216ENST00000533499 H0Y9J4 135 aa10.6□□□□□ -0.71
NXF1-216ENST00000533499 Q1RN00 199 aa10.6□□□□□ -0.71
NXF1-216ENST00000533499 SMIM11BQ8TCY0 68 aa10.6□□□□□ -0.71
NXF1-216ENST00000533499 KRTAP13-1Q8IUC0 172 aa10.59□□□□□ -0.71
NXF1-216ENST00000533499 A0A0B4J2C4 111 aa10.58□□□□□ -0.72
NXF1-216ENST00000533499 KRTAP4-16G5E9R7 235 aaPredicted RBP10.58□□□□□ -0.72
NXF1-216ENST00000533499 COX7BP24311 80 aa10.58□□□□□ -0.72
NXF1-216ENST00000533499 PKHD1L1Q86WI1 4243 aa10.57□□□□□ -0.72
NXF1-216ENST00000533499 K7ERJ3 54 aa10.57□□□□□ -0.72
NXF1-216ENST00000533499 BVES-AS1Q5T3Y7 98 aa10.57□□□□□ -0.72
NXF1-216ENST00000533499 Q6ZRX8 168 aa10.57□□□□□ -0.72
NXF1-216ENST00000533499 SMCR5Q8TEV8 140 aa10.56□□□□□ -0.72
NXF1-216ENST00000533499 PRO1854Q9UHT4 67 aa10.56□□□□□ -0.72
NXF1-216ENST00000533499 M0R143 59 aa10.55□□□□□ -0.72
NXF1-216ENST00000533499 VAMP3Q15836 100 aa10.54□□□□□ -0.72
NXF1-216ENST00000533499 BATFQ16520 125 aa10.53□□□□□ -0.72
NXF1-216ENST00000533499 Q9BRP9 147 aa10.53□□□□□ -0.72
NXF1-216ENST00000533499 A0A1B0GWB2 263 aa10.52□□□□□ -0.73
NXF1-216ENST00000533499 ELOF1P60002 83 aaKnown RBP10.52□□□□□ -0.73
NXF1-216ENST00000533499 ERC2-IT1O76042 136 aa10.51□□□□□ -0.73
NXF1-216ENST00000533499 TRBV7-6A0A0J9YX20 115 aa10.5□□□□□ -0.73
NXF1-216ENST00000533499 ANAPC11Q9NYG5 84 aa10.49□□□□□ -0.73
NXF1-216ENST00000533499 DHRS4-AS1Q9P1J3 65 aa10.49□□□□□ -0.73
NXF1-216ENST00000533499 PSMB2P49721 201 aa10.48□□□□□ -0.73
NXF1-216ENST00000533499 ZNF706Q9Y5V0 76 aaPredicted RBP10.48□□□□□ -0.73
NXF1-216ENST00000533499 SLC25A20O43772 301 aa10.47□□□□□ -0.73
NXF1-216ENST00000533499 GAGE2AQ6NT46 116 aa10.47□□□□□ -0.73
NXF1-216ENST00000533499 PCLOQ9Y6V0 5065 aa10.46□□□□□ -0.73
NXF1-216ENST00000533499 J3QL48 77 aa10.46□□□□□ -0.73
NXF1-216ENST00000533499 SPRR4Q96PI1 79 aa10.46□□□□□ -0.73
NXF1-216ENST00000533499 PCP4L1A6NKN8 68 aa10.45□□□□□ -0.74
NXF1-216ENST00000533499 OXTP01178 125 aa10.45□□□□□ -0.74
NXF1-216ENST00000533499 ST20-AS1Q8NBB2 130 aa10.45□□□□□ -0.74
NXF1-216ENST00000533499 TSPAN13O95857 204 aa10.44□□□□□ -0.74
NXF1-216ENST00000533499 KRTAP1-4P0C5Y4 121 aa10.44□□□□□ -0.74
NXF1-216ENST00000533499 PRR26Q8N8Z3 221 aa10.44□□□□□ -0.74
NXF1-216ENST00000533499 DEFB105AQ8NG35 78 aa10.43□□□□□ -0.74
NXF1-216ENST00000533499 LINC01600Q96MT4 127 aa10.43□□□□□ -0.74
NXF1-216ENST00000533499 MYCBP2O75592 4640 aa10.42□□□□□ -0.74
NXF1-216ENST00000533499 KRTAP29-1A8MX34 341 aaPredicted RBP10.42□□□□□ -0.74
NXF1-216ENST00000533499 TRIAP1O43715 76 aa10.42□□□□□ -0.74
NXF1-216ENST00000533499 LINC00575Q6W349 94 aa10.42□□□□□ -0.74
NXF1-216ENST00000533499 CRYGAP11844 174 aa10.41□□□□□ -0.74
NXF1-216ENST00000533499 LRP1Q07954 4544 aaKnown RBP10.41□□□□□ -0.74
NXF1-216ENST00000533499 FAT3Q8TDW7 4589 aa10.4□□□□□ -0.74
NXF1-216ENST00000533499 hADV29S1A0JD25 119 aa10.4□□□□□ -0.74
NXF1-216ENST00000533499 H0YGX0 51 aa10.4□□□□□ -0.74
NXF1-216ENST00000533499 SCGB1C2P0DMR2 95 aa10.4□□□□□ -0.74
NXF1-216ENST00000533499 SNCGO76070 127 aa10.39□□□□□ -0.75
NXF1-216ENST00000533499 COX6CP09669 75 aa10.39□□□□□ -0.75
NXF1-216ENST00000533499 A0A087X002 238 aa10.38□□□□□ -0.75
NXF1-216ENST00000533499 NAA38Q9BRA0 125 aaKnown RBP10.38□□□□□ -0.75
NXF1-216ENST00000533499 FAM229BQ4G0N7 80 aa10.37□□□□□ -0.75
NXF1-216ENST00000533499 CLEC2BQ92478 149 aa10.37□□□□□ -0.75
NXF1-216ENST00000533499 IGLV9-49A0A0B4J1Y8 123 aa10.35□□□□□ -0.75
NXF1-216ENST00000533499 Q6ZQY7 126 aa10.35□□□□□ -0.75
NXF1-216ENST00000533499 TYMSOSQ8TAI1 123 aa10.35□□□□□ -0.75
NXF1-216ENST00000533499 FAM218AQ96MZ4 157 aa10.35□□□□□ -0.75
NXF1-216ENST00000533499 C3orf22Q8N5N4 141 aa10.34□□□□□ -0.75
NXF1-216ENST00000533499 MT1HL1P0DM35 61 aa10.33□□□□□ -0.76
NXF1-216ENST00000533499 LINC00483Q53H64 154 aa10.33□□□□□ -0.76
NXF1-216ENST00000533499 DMBT1Q9UGM3 2413 aaPredicted RBP10.33□□□□□ -0.76
NXF1-216ENST00000533499 TEX49A0A1B0GTD5 131 aa10.32□□□□□ -0.76
NXF1-216ENST00000533499 KRTAP10-8P60410 259 aa10.32□□□□□ -0.76
NXF1-216ENST00000533499 KRTAP13-2Q52LG2 175 aa10.32□□□□□ -0.76
NXF1-216ENST00000533499 C9orf153Q5TBE3 101 aa10.32□□□□□ -0.76
NXF1-216ENST00000533499 SNHG12Q9BXW3 62 aa10.32□□□□□ -0.76
NXF1-216ENST00000533499 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.31□□□□□ -0.76
NXF1-216ENST00000533499 LAMTOR3Q9UHA4 124 aa10.3□□□□□ -0.76
NXF1-216ENST00000533499 H3BUT2 72 aa10.29□□□□□ -0.76
NXF1-216ENST00000533499 DNAL4O96015 105 aa10.29□□□□□ -0.76
NXF1-216ENST00000533499 MOBPQ13875 183 aa10.29□□□□□ -0.76
NXF1-216ENST00000533499 IGLV5-48A0A075B6I7 105 aa10.28□□□□□ -0.76
NXF1-216ENST00000533499 SPRR1BP22528 89 aa10.28□□□□□ -0.76
NXF1-216ENST00000533499 LINC01547P58512 204 aaPredicted RBP10.27□□□□□ -0.77
NXF1-216ENST00000533499 Q8N377 158 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms