RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 SPTSSBQ8NFR3 76 aa10.17□□□□□ -0.78
PCDHA3-202ENST00000532566 SERTAD4-AS1Q5TG53 156 aa10.17□□□□□ -0.78
PCDHA3-202ENST00000532566 KCNQ1DNQ9H478 68 aa10.16□□□□□ -0.78
PCDHA3-202ENST00000532566 K7EIL1 84 aa10.16□□□□□ -0.78
PCDHA3-202ENST00000532566 FAM104AQ969W3 186 aa10.16□□□□□ -0.78
PCDHA3-202ENST00000532566 FAM168BA1KXE4 195 aa10.15□□□□□ -0.79
PCDHA3-202ENST00000532566 EPM2AB3EWF7 344 aa10.14□□□□□ -0.79
PCDHA3-202ENST00000532566 CHTF8P0CG12 524 aa10.13□□□□□ -0.79
PCDHA3-202ENST00000532566 A0A0U1RQV1 116 aa10.12□□□□□ -0.79
PCDHA3-202ENST00000532566 IGLV1-50A0A075B6I6 118 aa10.12□□□□□ -0.79
PCDHA3-202ENST00000532566 UNC79Q9P2D8 2635 aa10.12□□□□□ -0.79
PCDHA3-202ENST00000532566 PCOTHQ58A44 107 aa10.11□□□□□ -0.79
PCDHA3-202ENST00000532566 TEX15Q9BXT5 2789 aa10.11□□□□□ -0.79
PCDHA3-202ENST00000532566 BOD1L1Q8NFC6 3051 aa10.11□□□□□ -0.79
PCDHA3-202ENST00000532566 FRYLO94915 3013 aa10.1□□□□□ -0.79
PCDHA3-202ENST00000532566 STAB1Q9NY15 2570 aa10.1□□□□□ -0.79
PCDHA3-202ENST00000532566 hDV103S1A0JD37 113 aa10.1□□□□□ -0.79
PCDHA3-202ENST00000532566 MOBPQ13875 183 aa10.09□□□□□ -0.79
PCDHA3-202ENST00000532566 GCN1Q92616 2671 aaKnown RBP10.09□□□□□ -0.79
PCDHA3-202ENST00000532566 FLNCQ14315 2725 aa10.09□□□□□ -0.79
PCDHA3-202ENST00000532566 A6NED7 52 aa10.09□□□□□ -0.79
PCDHA3-202ENST00000532566 ADGRG4Q8IZF6 3080 aa10.09□□□□□ -0.79
PCDHA3-202ENST00000532566 TRBV7-4A0A0J9YYF1 115 aa10.08□□□□□ -0.8
PCDHA3-202ENST00000532566 C9orf129Q5T035 196 aaKnown RBP10.08□□□□□ -0.8
PCDHA3-202ENST00000532566 PRR15LQ9BU68 103 aa10.08□□□□□ -0.8
PCDHA3-202ENST00000532566 TM2D3Q9BRN9 247 aa10.07□□□□□ -0.8
PCDHA3-202ENST00000532566 RTL8CO15255 209 aa10.07□□□□□ -0.8
PCDHA3-202ENST00000532566 C1orf64Q8NEQ6 169 aa10.07□□□□□ -0.8
PCDHA3-202ENST00000532566 ATMQ13315 3056 aa10.06□□□□□ -0.8
PCDHA3-202ENST00000532566 COL6A3P12111 3177 aa10.06□□□□□ -0.8
PCDHA3-202ENST00000532566 TLX1NBP0CAT3 122 aa10.05□□□□□ -0.8
PCDHA3-202ENST00000532566 RPS28P62857 69 aaKnown RBP10.04□□□□□ -0.8
PCDHA3-202ENST00000532566 LINC01600Q96MT4 127 aa10.04□□□□□ -0.8
PCDHA3-202ENST00000532566 Q8N377 158 aa10.02□□□□□ -0.8
PCDHA3-202ENST00000532566 LIMD2Q9BT23 127 aa10.02□□□□□ -0.81
PCDHA3-202ENST00000532566 PLA2G2DQ9UNK4 145 aa10.02□□□□□ -0.81
PCDHA3-202ENST00000532566 KALRNO60229 2985 aa10.02□□□□□ -0.81
PCDHA3-202ENST00000532566 DMXL2Q8TDJ6 3036 aa10.01□□□□□ -0.81
PCDHA3-202ENST00000532566 TP53AIP1Q9HCN2 124 aa10.01□□□□□ -0.81
PCDHA3-202ENST00000532566 COL6A5A8TX70 2615 aa10□□□□□ -0.81
PCDHA3-202ENST00000532566 NOTCH1P46531 2555 aa9.99□□□□□ -0.81
PCDHA3-202ENST00000532566 REV3LO60673 3130 aa9.98□□□□□ -0.81
PCDHA3-202ENST00000532566 RETNLBQ9BQ08 111 aa9.98□□□□□ -0.81
PCDHA3-202ENST00000532566 WIPF1O43516 503 aa9.98□□□□□ -0.81
PCDHA3-202ENST00000532566 FREM2Q5SZK8 3169 aa9.97□□□□□ -0.81
PCDHA3-202ENST00000532566 PSPHP1O15172 72 aa9.97□□□□□ -0.81
PCDHA3-202ENST00000532566 CASC10Q5T4H9 136 aa9.97□□□□□ -0.81
PCDHA3-202ENST00000532566 SVIPQ8NHG7 77 aa9.97□□□□□ -0.81
PCDHA3-202ENST00000532566 RPL37AP61513 92 aaKnown RBP9.97□□□□□ -0.81
PCDHA3-202ENST00000532566 UBR5O95071 2799 aaPredicted RBP9.96□□□□□ -0.81
PCDHA3-202ENST00000532566 K7EQZ3 153 aa9.96□□□□□ -0.81
PCDHA3-202ENST00000532566 C9orf163Q8N9P6 203 aa9.96□□□□□ -0.81
PCDHA3-202ENST00000532566 COL12A1Q99715 3063 aa9.96□□□□□ -0.82
PCDHA3-202ENST00000532566 H3BPC8 53 aa9.95□□□□□ -0.82
PCDHA3-202ENST00000532566 IGFL1Q6UW32 110 aa9.95□□□□□ -0.82
PCDHA3-202ENST00000532566 SPEGQ15772 3267 aa9.95□□□□□ -0.82
PCDHA3-202ENST00000532566 TRAV22A0A0B4J277 110 aa9.94□□□□□ -0.82
PCDHA3-202ENST00000532566 BAHCC1Q9P281 2608 aa9.94□□□□□ -0.82
PCDHA3-202ENST00000532566 OBSCN-AS1Q96MR7 158 aa9.94□□□□□ -0.82
PCDHA3-202ENST00000532566 NBEAL2Q6ZNJ1 2754 aa9.94□□□□□ -0.82
PCDHA3-202ENST00000532566 TNRC18O15417 2968 aaPredicted RBP9.93□□□□□ -0.82
PCDHA3-202ENST00000532566 ERC2-IT1O76042 136 aa9.93□□□□□ -0.82
PCDHA3-202ENST00000532566 SPACA4Q8TDM5 124 aa9.92□□□□□ -0.82
PCDHA3-202ENST00000532566 A8MWP4 228 aa9.92□□□□□ -0.82
PCDHA3-202ENST00000532566 LRBAP50851 2863 aa9.91□□□□□ -0.82
PCDHA3-202ENST00000532566 EYSQ5T1H1 3165 aa9.91□□□□□ -0.82
PCDHA3-202ENST00000532566 K7ERS5 55 aa9.89□□□□□ -0.83
PCDHA3-202ENST00000532566 CNBPP62633 177 aaKnown RBP9.89□□□□□ -0.83
PCDHA3-202ENST00000532566 WWC2-AS2Q96NR7 200 aa9.89□□□□□ -0.83
PCDHA3-202ENST00000532566 C1orf195Q5TG92 126 aa9.89□□□□□ -0.83
PCDHA3-202ENST00000532566 A0A1W2PNN7 141 aa9.89□□□□□ -0.83
PCDHA3-202ENST00000532566 APLNQ9ULZ1 77 aa9.88□□□□□ -0.83
PCDHA3-202ENST00000532566 KLKP1Q107X0 134 aa9.88□□□□□ -0.83
PCDHA3-202ENST00000532566 ITPR1Q14643 2758 aa9.88□□□□□ -0.83
PCDHA3-202ENST00000532566 A0A087WTM6 91 aa9.87□□□□□ -0.83
PCDHA3-202ENST00000532566 IGLV5-37A0A075B6J1 123 aa9.87□□□□□ -0.83
PCDHA3-202ENST00000532566 IGKV2D-30A0A075B6S6 120 aa9.87□□□□□ -0.83
PCDHA3-202ENST00000532566 IGKV2-30P06310 120 aa9.87□□□□□ -0.83
PCDHA3-202ENST00000532566 A0A1W2PNM2 257 aa9.86□□□□□ -0.83
PCDHA3-202ENST00000532566 TACC2O95359 2948 aa9.86□□□□□ -0.83
PCDHA3-202ENST00000532566 A0A0G2JQZ4 141 aa9.85□□□□□ -0.83
PCDHA3-202ENST00000532566 SPTBN5Q9NRC6 3674 aaKnown RBP9.85□□□□□ -0.83
PCDHA3-202ENST00000532566 NBEAL1Q6ZS30 2694 aa9.84□□□□□ -0.83
PCDHA3-202ENST00000532566 IGLV5-48A0A075B6I7 105 aa9.84□□□□□ -0.83
PCDHA3-202ENST00000532566 C4orf26Q17RF5 130 aa9.84□□□□□ -0.83
PCDHA3-202ENST00000532566 PMAIP1Q13794 54 aa9.83□□□□□ -0.84
PCDHA3-202ENST00000532566 PRR15Q8IV56 129 aa9.83□□□□□ -0.84
PCDHA3-202ENST00000532566 ZNF861PO60384 105 aa9.82□□□□□ -0.84
PCDHA3-202ENST00000532566 SPINK1P00995 79 aa9.82□□□□□ -0.84
PCDHA3-202ENST00000532566 LINC00313P59037 77 aa9.82□□□□□ -0.84
PCDHA3-202ENST00000532566 TYMSOSQ8TAI1 123 aa9.81□□□□□ -0.84
PCDHA3-202ENST00000532566 ZZEF1O43149 2961 aa9.81□□□□□ -0.84
PCDHA3-202ENST00000532566 Q8NDZ9 215 aa9.79□□□□□ -0.84
PCDHA3-202ENST00000532566 MRPL34Q9BQ48 92 aaKnown RBP9.79□□□□□ -0.84
PCDHA3-202ENST00000532566 DMXL1Q9Y485 3027 aa9.79□□□□□ -0.84
PCDHA3-202ENST00000532566 PRO0628Q9UI54 55 aa9.78□□□□□ -0.84
PCDHA3-202ENST00000532566 H7BZZ5 65 aa9.78□□□□□ -0.84
PCDHA3-202ENST00000532566 ACYP2P14621 99 aa9.78□□□□□ -0.84
PCDHA3-202ENST00000532566 C8orf87E5RJ46 101 aa9.77□□□□□ -0.85
PCDHA3-202ENST00000532566 SSBP3-AS1Q7Z2R9 100 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms