RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 LINC00167Q96N53 147 aa7.8□□□□□ -1.16
COPB1-208ENST00000532088 HNRNPA3P51991 378 aaKnown RBP7.79□□□□□ -1.16
COPB1-208ENST00000532088 PRO1933Q9H354 126 aa7.79□□□□□ -1.16
COPB1-208ENST00000532088 CBY1Q9Y3M2 126 aa7.79□□□□□ -1.16
COPB1-208ENST00000532088 IGLV1-50A0A075B6I6 118 aa7.78□□□□□ -1.16
COPB1-208ENST00000532088 UBE2BP63146 152 aa7.78□□□□□ -1.16
COPB1-208ENST00000532088 CEND1Q8N111 149 aa7.78□□□□□ -1.16
COPB1-208ENST00000532088 KIAA1109Q2LD37 5005 aa7.77□□□□□ -1.17
COPB1-208ENST00000532088 IGKV2-28A0A075B6P5 120 aa7.77□□□□□ -1.17
COPB1-208ENST00000532088 NCR3O14931 201 aa7.77□□□□□ -1.17
COPB1-208ENST00000532088 IGKV2D-28P01615 120 aa7.77□□□□□ -1.17
COPB1-208ENST00000532088 IGLV6-57P01721 117 aa7.77□□□□□ -1.17
COPB1-208ENST00000532088 PRR3P79522 188 aaKnown RBP7.77□□□□□ -1.17
COPB1-208ENST00000532088 TRAV13-2A0A0B4J235 113 aa7.76□□□□□ -1.17
COPB1-208ENST00000532088 A4D1N5 150 aa7.76□□□□□ -1.17
COPB1-208ENST00000532088 TMEM126AQ9H061 195 aa7.76□□□□□ -1.17
COPB1-208ENST00000532088 DDTP30046 118 aa7.75□□□□□ -1.17
COPB1-208ENST00000532088 S100A7L2Q5SY68 101 aa7.75□□□□□ -1.17
COPB1-208ENST00000532088 KCNQ1DNQ9H478 68 aa7.75□□□□□ -1.17
COPB1-208ENST00000532088 FAT1Q14517 4588 aa7.74□□□□□ -1.17
COPB1-208ENST00000532088 TRBV10-3A0A0K0K1G6 114 aa7.74□□□□□ -1.17
COPB1-208ENST00000532088 GAGE10A6NGK3 116 aa7.74□□□□□ -1.17
COPB1-208ENST00000532088 PRYO14603 147 aa7.74□□□□□ -1.17
COPB1-208ENST00000532088 A0A0B4J2C4 111 aa7.73□□□□□ -1.17
COPB1-208ENST00000532088 RPL37AP8A6NKH3 93 aa7.73□□□□□ -1.17
COPB1-208ENST00000532088 SMR3BP02814 79 aaPredicted RBP7.73□□□□□ -1.17
COPB1-208ENST00000532088 RPL37AP61513 92 aaKnown RBP7.73□□□□□ -1.17
COPB1-208ENST00000532088 LINC00337Q8N6G1 96 aa7.73□□□□□ -1.17
COPB1-208ENST00000532088 PSORS1C2Q9UIG4 136 aa7.73□□□□□ -1.17
COPB1-208ENST00000532088 SPRR1AP35321 89 aa7.72□□□□□ -1.17
COPB1-208ENST00000532088 FXYD2P54710 66 aa7.72□□□□□ -1.17
COPB1-208ENST00000532088 REG3GQ6UW15 175 aa7.72□□□□□ -1.17
COPB1-208ENST00000532088 KRTAP11-1Q8IUC1 163 aa7.72□□□□□ -1.17
COPB1-208ENST00000532088 VPS13BQ7Z7G8 4022 aa7.71□□□□□ -1.17
COPB1-208ENST00000532088 M0R143 59 aa7.71□□□□□ -1.18
COPB1-208ENST00000532088 BCE1O60756 84 aa7.71□□□□□ -1.18
COPB1-208ENST00000532088 CFC1BP0CG36 223 aa7.71□□□□□ -1.18
COPB1-208ENST00000532088 CFC1P0CG37 223 aa7.71□□□□□ -1.18
COPB1-208ENST00000532088 OR13C6PQ8NH95 151 aa7.71□□□□□ -1.18
COPB1-208ENST00000532088 TRAV23DV6A0A075B6W5 121 aa7.7□□□□□ -1.18
COPB1-208ENST00000532088 A0A1B0GWB2 263 aa7.7□□□□□ -1.18
COPB1-208ENST00000532088 KRTAP10-4P60372 401 aaPredicted RBP7.7□□□□□ -1.18
COPB1-208ENST00000532088 HERC2O95714 4834 aa7.69□□□□□ -1.18
COPB1-208ENST00000532088 A6NDN8 102 aa7.69□□□□□ -1.18
COPB1-208ENST00000532088 C1orf137Q5JT78 98 aa7.69□□□□□ -1.18
COPB1-208ENST00000532088 BVES-AS1Q5T3Y7 98 aa7.69□□□□□ -1.18
COPB1-208ENST00000532088 Q5VSD8 79 aa7.69□□□□□ -1.18
COPB1-208ENST00000532088 RAB37Q96AX2 223 aa7.69□□□□□ -1.18
COPB1-208ENST00000532088 KRTAP4-16G5E9R7 235 aaPredicted RBP7.68□□□□□ -1.18
COPB1-208ENST00000532088 H0Y9J4 135 aa7.68□□□□□ -1.18
COPB1-208ENST00000532088 IGLV7-43P04211 117 aa7.68□□□□□ -1.18
COPB1-208ENST00000532088 ZNF73O43830 326 aaPredicted RBP7.67□□□□□ -1.18
COPB1-208ENST00000532088 TRBV7-6A0A0J9YX20 115 aa7.66□□□□□ -1.18
COPB1-208ENST00000532088 RPL13AP40429 203 aaKnown RBP7.66□□□□□ -1.18
COPB1-208ENST00000532088 HINT1P49773 126 aaPredicted RBP7.66□□□□□ -1.18
COPB1-208ENST00000532088 KRTAP13-1Q8IUC0 172 aa7.66□□□□□ -1.18
COPB1-208ENST00000532088 DIRC1Q969H9 104 aa7.66□□□□□ -1.18
COPB1-208ENST00000532088 NHP2Q9NX24 153 aaKnown RBP7.66□□□□□ -1.18
COPB1-208ENST00000532088 PRO1854Q9UHT4 67 aa7.66□□□□□ -1.18
COPB1-208ENST00000532088 ETDCA0A1B0GVM5 59 aa7.65□□□□□ -1.18
COPB1-208ENST00000532088 ZNF861PO60384 105 aa7.65□□□□□ -1.18
COPB1-208ENST00000532088 RPL28P46779 137 aaKnown RBP7.65□□□□□ -1.18
COPB1-208ENST00000532088 SMIM11BQ8TCY0 68 aa7.65□□□□□ -1.18
COPB1-208ENST00000532088 PCP4L1A6NKN8 68 aa7.64□□□□□ -1.19
COPB1-208ENST00000532088 FAM19A1Q7Z5A9 133 aa7.64□□□□□ -1.19
COPB1-208ENST00000532088 SVIPQ8NHG7 77 aa7.64□□□□□ -1.19
COPB1-208ENST00000532088 UBE2AP49459 152 aa7.63□□□□□ -1.19
COPB1-208ENST00000532088 C6orf99Q4VX62 202 aa7.63□□□□□ -1.19
COPB1-208ENST00000532088 SPINK6Q6UWN8 80 aa7.63□□□□□ -1.19
COPB1-208ENST00000532088 Q6ZRX8 168 aa7.63□□□□□ -1.19
COPB1-208ENST00000532088 KRTAP17-1Q9BYP8 105 aa7.63□□□□□ -1.19
COPB1-208ENST00000532088 ELOF1P60002 83 aaKnown RBP7.62□□□□□ -1.19
COPB1-208ENST00000532088 KRTAP15-1Q3LI76 137 aa7.62□□□□□ -1.19
COPB1-208ENST00000532088 INAFM2P0DMQ5 153 aa7.61□□□□□ -1.19
COPB1-208ENST00000532088 VAMP3Q15836 100 aa7.61□□□□□ -1.19
COPB1-208ENST00000532088 PKHD1L1Q86WI1 4243 aa7.6□□□□□ -1.19
COPB1-208ENST00000532088 COX7BP24311 80 aa7.6□□□□□ -1.19
COPB1-208ENST00000532088 K7ERJ3 54 aa7.59□□□□□ -1.19
COPB1-208ENST00000532088 PRLHP81277 87 aa7.59□□□□□ -1.19
COPB1-208ENST00000532088 Q1RN00 199 aa7.59□□□□□ -1.19
COPB1-208ENST00000532088 DHRS4-AS1Q9P1J3 65 aa7.59□□□□□ -1.19
COPB1-208ENST00000532088 H0YGX0 51 aa7.57□□□□□ -1.2
COPB1-208ENST00000532088 H7C2G1 150 aa7.57□□□□□ -1.2
COPB1-208ENST00000532088 TSPAN13O95857 204 aa7.57□□□□□ -1.2
COPB1-208ENST00000532088 SMCR5Q8TEV8 140 aa7.57□□□□□ -1.2
COPB1-208ENST00000532088 Q9BRP9 147 aa7.57□□□□□ -1.2
COPB1-208ENST00000532088 HIGD2AQ9BW72 106 aa7.56□□□□□ -1.2
COPB1-208ENST00000532088 COX6CP09669 75 aa7.55□□□□□ -1.2
COPB1-208ENST00000532088 BATFQ16520 125 aa7.55□□□□□ -1.2
COPB1-208ENST00000532088 ZNF706Q9Y5V0 76 aaPredicted RBP7.55□□□□□ -1.2
COPB1-208ENST00000532088 A0A1B0GX51 115 aa7.54□□□□□ -1.2
COPB1-208ENST00000532088 SLC25A20O43772 301 aa7.54□□□□□ -1.2
COPB1-208ENST00000532088 LINC00575Q6W349 94 aa7.54□□□□□ -1.2
COPB1-208ENST00000532088 SNHG12Q9BXW3 62 aa7.54□□□□□ -1.2
COPB1-208ENST00000532088 SNCGO76070 127 aa7.52□□□□□ -1.21
COPB1-208ENST00000532088 PSMB2P49721 201 aa7.52□□□□□ -1.21
COPB1-208ENST00000532088 hADV29S1A0JD25 119 aa7.51□□□□□ -1.21
COPB1-208ENST00000532088 ERC2-IT1O76042 136 aa7.5□□□□□ -1.21
COPB1-208ENST00000532088 KRTAP1-4P0C5Y4 121 aa7.5□□□□□ -1.21
COPB1-208ENST00000532088 COL5A1-AS1Q5SY13 56 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms