RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 YPEL4Q96NS1 127 aa8.61□□□□□ -1.03
DEPDC7-204ENST00000532078 KRTAP13-3Q3SY46 172 aa8.6□□□□□ -1.03
DEPDC7-204ENST00000532078 H0Y8G0 127 aa8.59□□□□□ -1.03
DEPDC7-204ENST00000532078 FAM19A2Q8N3H0 131 aa8.59□□□□□ -1.03
DEPDC7-204ENST00000532078 TRBV10-2A0A0K0K1G8 114 aa8.58□□□□□ -1.04
DEPDC7-204ENST00000532078 DDTP30046 118 aa8.58□□□□□ -1.04
DEPDC7-204ENST00000532078 TSPEAR-AS2P59090 65 aa8.58□□□□□ -1.04
DEPDC7-204ENST00000532078 GAGE2AQ6NT46 116 aa8.58□□□□□ -1.04
DEPDC7-204ENST00000532078 LOC107984156A0A0G2JMH3 177 aa8.57□□□□□ -1.04
DEPDC7-204ENST00000532078 LEPROTO15243 131 aa8.57□□□□□ -1.04
DEPDC7-204ENST00000532078 PLNP26678 52 aa8.57□□□□□ -1.04
DEPDC7-204ENST00000532078 MOBPQ13875 183 aa8.57□□□□□ -1.04
DEPDC7-204ENST00000532078 ARL17AQ8IVW1 177 aa8.57□□□□□ -1.04
DEPDC7-204ENST00000532078 IGLV9-49A0A0B4J1Y8 123 aa8.56□□□□□ -1.04
DEPDC7-204ENST00000532078 RPS29P62273 56 aaKnown RBP8.56□□□□□ -1.04
DEPDC7-204ENST00000532078 ASB16-AS1Q495Z4 193 aa8.56□□□□□ -1.04
DEPDC7-204ENST00000532078 MIEN1Q9BRT3 115 aa8.56□□□□□ -1.04
DEPDC7-204ENST00000532078 SPANXB1Q9NS25 103 aaPredicted RBP8.56□□□□□ -1.04
DEPDC7-204ENST00000532078 LEPROTL1O95214 131 aa8.55□□□□□ -1.04
DEPDC7-204ENST00000532078 Q6ZRX8 168 aa8.55□□□□□ -1.04
DEPDC7-204ENST00000532078 SSBP3-AS1Q7Z2R9 100 aa8.55□□□□□ -1.04
DEPDC7-204ENST00000532078 J3QQQ9 107 aa8.54□□□□□ -1.04
DEPDC7-204ENST00000532078 ERC2-IT1O76042 136 aa8.54□□□□□ -1.04
DEPDC7-204ENST00000532078 NMUP48645 174 aa8.54□□□□□ -1.04
DEPDC7-204ENST00000532078 HERVK_113P61574 105 aa8.54□□□□□ -1.04
DEPDC7-204ENST00000532078 Q9BRP9 147 aa8.54□□□□□ -1.04
DEPDC7-204ENST00000532078 S100A7L2Q5SY68 101 aa8.53□□□□□ -1.04
DEPDC7-204ENST00000532078 SERF1AO75920 110 aa8.52□□□□□ -1.05
DEPDC7-204ENST00000532078 DPM2O94777 84 aa8.52□□□□□ -1.05
DEPDC7-204ENST00000532078 NDUFC2O95298 119 aa8.52□□□□□ -1.05
DEPDC7-204ENST00000532078 SEC61BP60468 96 aaKnown RBP8.52□□□□□ -1.05
DEPDC7-204ENST00000532078 Q8N377 158 aa8.52□□□□□ -1.05
DEPDC7-204ENST00000532078 HSPB8Q9UJY1 196 aa8.52□□□□□ -1.05
DEPDC7-204ENST00000532078 SLC25A20O43772 301 aa8.51□□□□□ -1.05
DEPDC7-204ENST00000532078 IGLV6-57P01721 117 aa8.51□□□□□ -1.05
DEPDC7-204ENST00000532078 LGALS3P17931 250 aaKnown RBP8.51□□□□□ -1.05
DEPDC7-204ENST00000532078 JOSD1Q15040 202 aaPredicted RBP8.51□□□□□ -1.05
DEPDC7-204ENST00000532078 TRAV23DV6A0A075B6W5 121 aa8.5□□□□□ -1.05
DEPDC7-204ENST00000532078 TRGC2P03986 189 aa8.5□□□□□ -1.05
DEPDC7-204ENST00000532078 IGKCP01834 107 aa8.49□□□□□ -1.05
DEPDC7-204ENST00000532078 C9orf153Q5TBE3 101 aa8.48□□□□□ -1.05
DEPDC7-204ENST00000532078 PMCHL2Q9BQD1 86 aa8.48□□□□□ -1.05
DEPDC7-204ENST00000532078 ZNF73O43830 326 aaPredicted RBP8.47□□□□□ -1.05
DEPDC7-204ENST00000532078 FABP4P15090 132 aa8.47□□□□□ -1.05
DEPDC7-204ENST00000532078 LINC01547P58512 204 aaPredicted RBP8.47□□□□□ -1.05
DEPDC7-204ENST00000532078 CBY1Q9Y3M2 126 aa8.46□□□□□ -1.06
DEPDC7-204ENST00000532078 NPC2P61916 151 aa8.45□□□□□ -1.06
DEPDC7-204ENST00000532078 SOSTDC1Q6X4U4 206 aa8.45□□□□□ -1.06
DEPDC7-204ENST00000532078 A0A0J9YXY3 114 aa8.44□□□□□ -1.06
DEPDC7-204ENST00000532078 C5orf52A6NGY3 159 aa8.44□□□□□ -1.06
DEPDC7-204ENST00000532078 KRTAP4-1Q9BYQ7 146 aa8.44□□□□□ -1.06
DEPDC7-204ENST00000532078 HINT1P49773 126 aaPredicted RBP8.43□□□□□ -1.06
DEPDC7-204ENST00000532078 E9PLD3 99 aa8.42□□□□□ -1.06
DEPDC7-204ENST00000532078 ADAMTSL4-AS1Q5T5F5 129 aa8.42□□□□□ -1.06
DEPDC7-204ENST00000532078 ST20-AS1Q8NBB2 130 aa8.42□□□□□ -1.06
DEPDC7-204ENST00000532078 SLC25A34Q6PIV7 304 aa8.4□□□□□ -1.06
DEPDC7-204ENST00000532078 SPANXCQ9NY87 97 aa8.4□□□□□ -1.06
DEPDC7-204ENST00000532078 LIMD2Q9BT23 127 aa8.39□□□□□ -1.07
DEPDC7-204ENST00000532078 OR13C6PQ8NH95 151 aa8.38□□□□□ -1.07
DEPDC7-204ENST00000532078 DHRS4-AS1Q9P1J3 65 aa8.38□□□□□ -1.07
DEPDC7-204ENST00000532078 TIMM17BO60830 172 aa8.37□□□□□ -1.07
DEPDC7-204ENST00000532078 SPRR1BP22528 89 aa8.37□□□□□ -1.07
DEPDC7-204ENST00000532078 LINC00308Q8TCZ7 52 aa8.37□□□□□ -1.07
DEPDC7-204ENST00000532078 LITAFQ99732 161 aa8.37□□□□□ -1.07
DEPDC7-204ENST00000532078 TRIAP1O43715 76 aa8.36□□□□□ -1.07
DEPDC7-204ENST00000532078 SPANXDQ9BXN6 97 aa8.36□□□□□ -1.07
DEPDC7-204ENST00000532078 COLCA2A8K830 154 aa8.35□□□□□ -1.07
DEPDC7-204ENST00000532078 LAMTOR3Q9UHA4 124 aa8.35□□□□□ -1.07
DEPDC7-204ENST00000532078 SYS1-DBNDD2H3BUS1 97 aa8.34□□□□□ -1.07
DEPDC7-204ENST00000532078 HRCT1Q6UXD1 115 aa8.33□□□□□ -1.08
DEPDC7-204ENST00000532078 ZNF815PA8K554 130 aa8.32□□□□□ -1.08
DEPDC7-204ENST00000532078 COX7BP24311 80 aa8.32□□□□□ -1.08
DEPDC7-204ENST00000532078 ELOF1P60002 83 aaKnown RBP8.32□□□□□ -1.08
DEPDC7-204ENST00000532078 LINC01545Q5VT33 79 aa8.31□□□□□ -1.08
DEPDC7-204ENST00000532078 LINC00518Q8N0U6 118 aa8.31□□□□□ -1.08
DEPDC7-204ENST00000532078 C6orf99Q4VX62 202 aa8.3□□□□□ -1.08
DEPDC7-204ENST00000532078 CD164Q04900 197 aa8.29□□□□□ -1.08
DEPDC7-204ENST00000532078 PET117Q6UWS5 81 aa8.29□□□□□ -1.08
DEPDC7-204ENST00000532078 C9orf92A6NGG3 77 aa8.28□□□□□ -1.08
DEPDC7-204ENST00000532078 TAL2Q16559 108 aa8.28□□□□□ -1.08
DEPDC7-204ENST00000532078 Q1RN00 199 aa8.28□□□□□ -1.08
DEPDC7-204ENST00000532078 HIST1H2BKO60814 126 aa8.27□□□□□ -1.09
DEPDC7-204ENST00000532078 HIST1H2BJP06899 126 aa8.27□□□□□ -1.09
DEPDC7-204ENST00000532078 HIST1H2BOP23527 126 aa8.27□□□□□ -1.09
DEPDC7-204ENST00000532078 HIST1H2BBP33778 126 aa8.27□□□□□ -1.09
DEPDC7-204ENST00000532078 HIST1H2BDP58876 126 aa8.27□□□□□ -1.09
DEPDC7-204ENST00000532078 HIST1H2BCP62807 126 aa8.27□□□□□ -1.09
DEPDC7-204ENST00000532078 HIST2H2BEQ16778 126 aa8.27□□□□□ -1.09
DEPDC7-204ENST00000532078 PCOTHQ58A44 107 aa8.27□□□□□ -1.09
DEPDC7-204ENST00000532078 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.27□□□□□ -1.09
DEPDC7-204ENST00000532078 SLC7A5P1Q8MH63 180 aa8.27□□□□□ -1.09
DEPDC7-204ENST00000532078 DEFB105AQ8NG35 78 aa8.27□□□□□ -1.09
DEPDC7-204ENST00000532078 HIST1H2BHQ93079 126 aa8.27□□□□□ -1.09
DEPDC7-204ENST00000532078 HIST1H2BNQ99877 126 aa8.27□□□□□ -1.09
DEPDC7-204ENST00000532078 HIST1H2BMQ99879 126 aa8.27□□□□□ -1.09
DEPDC7-204ENST00000532078 TTTY13Q9BZ97 58 aa8.27□□□□□ -1.09
DEPDC7-204ENST00000532078 PRO1933Q9H354 126 aa8.27□□□□□ -1.09
DEPDC7-204ENST00000532078 IGLV8-61A0A075B6I0 122 aa8.26□□□□□ -1.09
DEPDC7-204ENST00000532078 TRBV7-6A0A0J9YX20 115 aa8.26□□□□□ -1.09
DEPDC7-204ENST00000532078 TEX49A0A1B0GTD5 131 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms