RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 LOC107984156A0A0G2JMH3 177 aa11.29□□□□□ -0.6
GMDS-208ENST00000530927 ARL17AQ8IVW1 177 aa11.29□□□□□ -0.6
GMDS-208ENST00000530927 SPANXB1Q9NS25 103 aaPredicted RBP11.29□□□□□ -0.6
GMDS-208ENST00000530927 A0A1B0GWB2 263 aa11.27□□□□□ -0.6
GMDS-208ENST00000530927 ZNF861PO60384 105 aa11.27□□□□□ -0.6
GMDS-208ENST00000530927 BCE1O60756 84 aa11.27□□□□□ -0.6
GMDS-208ENST00000530927 COPS9Q8WXC6 57 aa11.27□□□□□ -0.6
GMDS-208ENST00000530927 TMEM238LA0A1B0GVL6 79 aa11.26□□□□□ -0.61
GMDS-208ENST00000530927 A6NJY4 79 aa11.26□□□□□ -0.61
GMDS-208ENST00000530927 KRTAP1-4P0C5Y4 121 aa11.26□□□□□ -0.61
GMDS-208ENST00000530927 IFITM1P13164 125 aa11.26□□□□□ -0.61
GMDS-208ENST00000530927 FXYD2P54710 66 aa11.26□□□□□ -0.61
GMDS-208ENST00000530927 RPL24P83731 157 aaKnown RBP11.26□□□□□ -0.61
GMDS-208ENST00000530927 PRR26Q8N8Z3 221 aa11.26□□□□□ -0.61
GMDS-208ENST00000530927 LINC00308Q8TCZ7 52 aa11.26□□□□□ -0.61
GMDS-208ENST00000530927 HIST1H4GQ99525 98 aa11.26□□□□□ -0.61
GMDS-208ENST00000530927 NPC2P61916 151 aa11.26□□□□□ -0.61
GMDS-208ENST00000530927 IGLV1-50A0A075B6I6 118 aa11.25□□□□□ -0.61
GMDS-208ENST00000530927 A0A1W2PPM0 123 aa11.25□□□□□ -0.61
GMDS-208ENST00000530927 K7EP34 96 aa11.25□□□□□ -0.61
GMDS-208ENST00000530927 SOSTDC1Q6X4U4 206 aa11.25□□□□□ -0.61
GMDS-208ENST00000530927 PPDPFQ9H3Y8 114 aa11.25□□□□□ -0.61
GMDS-208ENST00000530927 FABP2P12104 132 aa11.24□□□□□ -0.61
GMDS-208ENST00000530927 H3BUT2 72 aa11.23□□□□□ -0.61
GMDS-208ENST00000530927 EIF4EBP3O60516 100 aaPredicted RBP11.23□□□□□ -0.61
GMDS-208ENST00000530927 MUSTN1Q8IVN3 82 aa11.23□□□□□ -0.61
GMDS-208ENST00000530927 NCR3O14931 201 aa11.22□□□□□ -0.61
GMDS-208ENST00000530927 NDUFC2O95298 119 aa11.22□□□□□ -0.61
GMDS-208ENST00000530927 KRTAP13-1Q8IUC0 172 aa11.21□□□□□ -0.61
GMDS-208ENST00000530927 M0R378 163 aa11.2□□□□□ -0.62
GMDS-208ENST00000530927 TMEM126AQ9H061 195 aa11.2□□□□□ -0.62
GMDS-208ENST00000530927 NHP2Q9NX24 153 aaKnown RBP11.2□□□□□ -0.62
GMDS-208ENST00000530927 RPL28P46779 137 aaKnown RBP11.19□□□□□ -0.62
GMDS-208ENST00000530927 PRLHP81277 87 aa11.19□□□□□ -0.62
GMDS-208ENST00000530927 UBE2AP49459 152 aa11.18□□□□□ -0.62
GMDS-208ENST00000530927 RAB37Q96AX2 223 aa11.18□□□□□ -0.62
GMDS-208ENST00000530927 SPCS1Q9Y6A9 102 aa11.18□□□□□ -0.62
GMDS-208ENST00000530927 TRBV10-2A0A0K0K1G8 114 aa11.17□□□□□ -0.62
GMDS-208ENST00000530927 FAM19A1Q7Z5A9 133 aa11.17□□□□□ -0.62
GMDS-208ENST00000530927 ANAPC11Q9NYG5 84 aa11.17□□□□□ -0.62
GMDS-208ENST00000530927 LYRM7Q5U5X0 104 aa11.14□□□□□ -0.63
GMDS-208ENST00000530927 A0A087X002 238 aa11.13□□□□□ -0.63
GMDS-208ENST00000530927 A4D1N5 150 aa11.13□□□□□ -0.63
GMDS-208ENST00000530927 TRBV10-3A0A0K0K1G6 114 aa11.12□□□□□ -0.63
GMDS-208ENST00000530927 K7ERJ3 54 aa11.12□□□□□ -0.63
GMDS-208ENST00000530927 K7ERU9 68 aa11.1□□□□□ -0.63
GMDS-208ENST00000530927 S100A7L2Q5SY68 101 aa11.1□□□□□ -0.63
GMDS-208ENST00000530927 CBY1Q9Y3M2 126 aa11.1□□□□□ -0.63
GMDS-208ENST00000530927 OCIAD2Q56VL3 154 aa11.09□□□□□ -0.63
GMDS-208ENST00000530927 F8W1H4 67 aa11.09□□□□□ -0.63
GMDS-208ENST00000530927 IGLV6-57P01721 117 aa11.08□□□□□ -0.64
GMDS-208ENST00000530927 LINC00337Q8N6G1 96 aa11.08□□□□□ -0.64
GMDS-208ENST00000530927 OR13C6PQ8NH95 151 aa11.08□□□□□ -0.64
GMDS-208ENST00000530927 HIGD2AQ9BW72 106 aa11.08□□□□□ -0.64
GMDS-208ENST00000530927 TRAV13-2A0A0B4J235 113 aa11.07□□□□□ -0.64
GMDS-208ENST00000530927 A0A0B4J2C4 111 aa11.07□□□□□ -0.64
GMDS-208ENST00000530927 PRYO14603 147 aa11.07□□□□□ -0.64
GMDS-208ENST00000530927 NAA38Q9BRA0 125 aaKnown RBP11.07□□□□□ -0.64
GMDS-208ENST00000530927 KCNQ1DNQ9H478 68 aa11.07□□□□□ -0.64
GMDS-208ENST00000530927 KRTAP4-16G5E9R7 235 aaPredicted RBP11.05□□□□□ -0.64
GMDS-208ENST00000530927 SPRR1AP35321 89 aa11.05□□□□□ -0.64
GMDS-208ENST00000530927 KRTAP13-2Q52LG2 175 aa11.05□□□□□ -0.64
GMDS-208ENST00000530927 PRO1854Q9UHT4 67 aa11.05□□□□□ -0.64
GMDS-208ENST00000530927 TRBV20-1A0A075B6N2 111 aa11.04□□□□□ -0.64
GMDS-208ENST00000530927 CFC1BP0CG36 223 aa11.04□□□□□ -0.64
GMDS-208ENST00000530927 CFC1P0CG37 223 aa11.04□□□□□ -0.64
GMDS-208ENST00000530927 RPL13AP40429 203 aaKnown RBP11.04□□□□□ -0.64
GMDS-208ENST00000530927 LRP2P98164 4655 aa11.02□□□□□ -0.64
GMDS-208ENST00000530927 TSPAN13O95857 204 aa11.02□□□□□ -0.64
GMDS-208ENST00000530927 CRYGAP11844 174 aa11.02□□□□□ -0.64
GMDS-208ENST00000530927 UBR4Q5T4S7 5183 aa11.01□□□□□ -0.65
GMDS-208ENST00000530927 TRAV23DV6A0A075B6W5 121 aa11.01□□□□□ -0.65
GMDS-208ENST00000530927 ETDCA0A1B0GVM5 59 aa11.01□□□□□ -0.65
GMDS-208ENST00000530927 LPAP08519 4548 aa11□□□□□ -0.65
GMDS-208ENST00000530927 TYMSOSQ8TAI1 123 aa11□□□□□ -0.65
GMDS-208ENST00000530927 SMCR5Q8TEV8 140 aa11□□□□□ -0.65
GMDS-208ENST00000530927 B5MCH6 92 aa10.99□□□□□ -0.65
GMDS-208ENST00000530927 J3QR89 54 aa10.97□□□□□ -0.65
GMDS-208ENST00000530927 ZNF73O43830 326 aaPredicted RBP10.97□□□□□ -0.65
GMDS-208ENST00000530927 C3orf22Q8N5N4 141 aa10.97□□□□□ -0.65
GMDS-208ENST00000530927 SPRR4Q96PI1 79 aa10.97□□□□□ -0.65
GMDS-208ENST00000530927 H3BMG7 143 aa10.96□□□□□ -0.65
GMDS-208ENST00000530927 ERC2-IT1O76042 136 aa10.96□□□□□ -0.65
GMDS-208ENST00000530927 FAM229BQ4G0N7 80 aa10.96□□□□□ -0.65
GMDS-208ENST00000530927 PRO0461Q9UI25 63 aa10.96□□□□□ -0.65
GMDS-208ENST00000530927 Q9BRP9 147 aa10.95□□□□□ -0.66
GMDS-208ENST00000530927 SMIM11BQ8TCY0 68 aa10.94□□□□□ -0.66
GMDS-208ENST00000530927 H7C2G1 150 aa10.92□□□□□ -0.66
GMDS-208ENST00000530927 C6orf99Q4VX62 202 aa10.92□□□□□ -0.66
GMDS-208ENST00000530927 Q6ZRX8 168 aa10.92□□□□□ -0.66
GMDS-208ENST00000530927 TRBV7-6A0A0J9YX20 115 aa10.91□□□□□ -0.66
GMDS-208ENST00000530927 VPS25Q9BRG1 176 aa10.91□□□□□ -0.66
GMDS-208ENST00000530927 Q1RN00 199 aa10.9□□□□□ -0.66
GMDS-208ENST00000530927 SCGB1C2P0DMR2 95 aa10.89□□□□□ -0.67
GMDS-208ENST00000530927 PSMB2P49721 201 aa10.89□□□□□ -0.67
GMDS-208ENST00000530927 TCL1BO95988 128 aa10.88□□□□□ -0.67
GMDS-208ENST00000530927 GAGE2AQ6NT46 116 aa10.88□□□□□ -0.67
GMDS-208ENST00000530927 ZNF706Q9Y5V0 76 aaPredicted RBP10.88□□□□□ -0.67
GMDS-208ENST00000530927 COX6CP09669 75 aa10.87□□□□□ -0.67
GMDS-208ENST00000530927 COX7BP24311 80 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms