RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 DEFB131BA0A096LNP1 70 aa7.76□□□□□ -1.17
USP35-207ENST00000530546 ERC2-IT1O76042 136 aa7.76□□□□□ -1.17
USP35-207ENST00000530546 HAMPP81172 84 aa7.76□□□□□ -1.17
USP35-207ENST00000530546 PRR34Q9NV39 138 aa7.76□□□□□ -1.17
USP35-207ENST00000530546 ESRGQ1W209 222 aa7.75□□□□□ -1.17
USP35-207ENST00000530546 H3BQ85 93 aa7.74□□□□□ -1.17
USP35-207ENST00000530546 HIGD2BQ4VC39 106 aa7.73□□□□□ -1.17
USP35-207ENST00000530546 LINC00575Q6W349 94 aa7.72□□□□□ -1.17
USP35-207ENST00000530546 TM2D3Q9BRN9 247 aa7.72□□□□□ -1.17
USP35-207ENST00000530546 NBEAL1Q6ZS30 2694 aa7.72□□□□□ -1.17
USP35-207ENST00000530546 H3BNG1 76 aa7.71□□□□□ -1.17
USP35-207ENST00000530546 TMEM254Q8TBM7 123 aa7.71□□□□□ -1.17
USP35-207ENST00000530546 LAMTOR3Q9UHA4 124 aa7.71□□□□□ -1.17
USP35-207ENST00000530546 COX17Q14061 63 aa7.71□□□□□ -1.18
USP35-207ENST00000530546 NREPQ16612 68 aa7.71□□□□□ -1.18
USP35-207ENST00000530546 Q8NDZ9 215 aa7.71□□□□□ -1.18
USP35-207ENST00000530546 C6orf99Q4VX62 202 aa7.7□□□□□ -1.18
USP35-207ENST00000530546 C4orf48Q5BLP8 95 aa7.7□□□□□ -1.18
USP35-207ENST00000530546 MGAM2Q2M2H8 2515 aa7.69□□□□□ -1.18
USP35-207ENST00000530546 DNAH3Q8TD57 4116 aa7.69□□□□□ -1.18
USP35-207ENST00000530546 XAGE1AQ9HD64 81 aa7.68□□□□□ -1.18
USP35-207ENST00000530546 IGKV2D-24A0A075B6R9 120 aa7.68□□□□□ -1.18
USP35-207ENST00000530546 K7EIL1 84 aa7.68□□□□□ -1.18
USP35-207ENST00000530546 M0R2N4 97 aa7.68□□□□□ -1.18
USP35-207ENST00000530546 C6orf48Q9UBA6 75 aa7.68□□□□□ -1.18
USP35-207ENST00000530546 BPY2O14599 106 aa7.67□□□□□ -1.18
USP35-207ENST00000530546 PMAIP1Q13794 54 aa7.67□□□□□ -1.18
USP35-207ENST00000530546 FAM229BQ4G0N7 80 aa7.67□□□□□ -1.18
USP35-207ENST00000530546 MPLKIPQ8TAP9 179 aa7.67□□□□□ -1.18
USP35-207ENST00000530546 CAMK2N2Q96S95 79 aa7.67□□□□□ -1.18
USP35-207ENST00000530546 PRYO14603 147 aa7.66□□□□□ -1.18
USP35-207ENST00000530546 MUC7Q8TAX7 377 aa7.66□□□□□ -1.18
USP35-207ENST00000530546 KRTAP26-1Q6PEX3 210 aa7.65□□□□□ -1.18
USP35-207ENST00000530546 FUSP35637 526 aaKnown RBP eCLIP7.65□□□□□ -1.18
USP35-207ENST00000530546 PRR15Q8IV56 129 aa7.65□□□□□ -1.18
USP35-207ENST00000530546 CD164Q04900 197 aa7.64□□□□□ -1.19
USP35-207ENST00000530546 LINC01556Q5JQF7 62 aa7.64□□□□□ -1.19
USP35-207ENST00000530546 Q6ZRU5 148 aa7.64□□□□□ -1.19
USP35-207ENST00000530546 C15orf56Q8N910 161 aa7.64□□□□□ -1.19
USP35-207ENST00000530546 Q6ZQY7 126 aa7.62□□□□□ -1.19
USP35-207ENST00000530546 LINC00588Q9Y4M8 146 aa7.62□□□□□ -1.19
USP35-207ENST00000530546 GVQW2A0A096LPI5 108 aaPredicted RBP7.62□□□□□ -1.19
USP35-207ENST00000530546 OCR1Q9BZK8 76 aa7.62□□□□□ -1.19
USP35-207ENST00000530546 SCXQ7RTU7 201 aa7.61□□□□□ -1.19
USP35-207ENST00000530546 HUWE1Q7Z6Z7 4374 aaKnown RBP7.6□□□□□ -1.19
USP35-207ENST00000530546 IGLV6-57P01721 117 aa7.59□□□□□ -1.19
USP35-207ENST00000530546 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.59□□□□□ -1.19
USP35-207ENST00000530546 DNAH10OSP0CZ25 163 aa7.59□□□□□ -1.19
USP35-207ENST00000530546 MDFIQ99750 246 aa7.58□□□□□ -1.2
USP35-207ENST00000530546 COX7BP24311 80 aa7.58□□□□□ -1.2
USP35-207ENST00000530546 Q1T7F1 81 aa7.58□□□□□ -1.2
USP35-207ENST00000530546 IGKV4-1P06312 121 aa7.57□□□□□ -1.2
USP35-207ENST00000530546 CASC10Q5T4H9 136 aa7.57□□□□□ -1.2
USP35-207ENST00000530546 hDV103S1A0JD37 113 aa7.56□□□□□ -1.2
USP35-207ENST00000530546 SYCNQ0VAF6 134 aa7.56□□□□□ -1.2
USP35-207ENST00000530546 Q6ZRP5 223 aa7.56□□□□□ -1.2
USP35-207ENST00000530546 KRTAP21-3Q3LHN1 58 aa7.55□□□□□ -1.2
USP35-207ENST00000530546 VPREB1P12018 145 aa7.55□□□□□ -1.2
USP35-207ENST00000530546 DIRC1Q969H9 104 aa7.55□□□□□ -1.2
USP35-207ENST00000530546 STAB2Q8WWQ8 2551 aa7.54□□□□□ -1.2
USP35-207ENST00000530546 HIGD2AQ9BW72 106 aa7.54□□□□□ -1.2
USP35-207ENST00000530546 ZNF73O43830 326 aaPredicted RBP7.52□□□□□ -1.21
USP35-207ENST00000530546 LCE6AA0A183 80 aa7.52□□□□□ -1.21
USP35-207ENST00000530546 M0R378 163 aa7.51□□□□□ -1.21
USP35-207ENST00000530546 MRPL55Q7Z7F7 128 aaKnown RBP7.51□□□□□ -1.21
USP35-207ENST00000530546 Q8N9L7 120 aa7.51□□□□□ -1.21
USP35-207ENST00000530546 ELOF1P60002 83 aaKnown RBP7.5□□□□□ -1.21
USP35-207ENST00000530546 COL7A1Q02388 2944 aa7.49□□□□□ -1.21
USP35-207ENST00000530546 SERTAD4-AS1Q5TG53 156 aa7.49□□□□□ -1.21
USP35-207ENST00000530546 NKAPP1Q8N9T2 125 aa7.49□□□□□ -1.21
USP35-207ENST00000530546 C1orf64Q8NEQ6 169 aa7.48□□□□□ -1.21
USP35-207ENST00000530546 UBE2DNLQ8IWF7 75 aa7.48□□□□□ -1.21
USP35-207ENST00000530546 FAM168BA1KXE4 195 aa7.47□□□□□ -1.21
USP35-207ENST00000530546 KRTAP1-5Q9BYS1 174 aa7.46□□□□□ -1.21
USP35-207ENST00000530546 DNAH9Q9NYC9 4486 aa7.45□□□□□ -1.22
USP35-207ENST00000530546 A0A1B0GW54 56 aa7.45□□□□□ -1.22
USP35-207ENST00000530546 RPL37AP8A6NKH3 93 aa7.45□□□□□ -1.22
USP35-207ENST00000530546 C7orf33Q8WU49 177 aa7.45□□□□□ -1.22
USP35-207ENST00000530546 ZCCHC13Q8WW36 166 aaKnown RBP7.45□□□□□ -1.22
USP35-207ENST00000530546 CYP4F30PQ9H0H9 118 aa7.45□□□□□ -1.22
USP35-207ENST00000530546 LYSTQ99698 3801 aa7.45□□□□□ -1.22
USP35-207ENST00000530546 TRAV22A0A0B4J277 110 aa7.44□□□□□ -1.22
USP35-207ENST00000530546 SMIM29Q86T20 159 aa7.44□□□□□ -1.22
USP35-207ENST00000530546 FAM30AQ9NZY2 134 aa7.44□□□□□ -1.22
USP35-207ENST00000530546 PSCAO43653 123 aa7.43□□□□□ -1.22
USP35-207ENST00000530546 DNAH1Q9P2D7 4330 aa7.43□□□□□ -1.22
USP35-207ENST00000530546 B9D2Q9BPU9 175 aa7.43□□□□□ -1.22
USP35-207ENST00000530546 LRCOL1A6NCL2 159 aa7.42□□□□□ -1.22
USP35-207ENST00000530546 APLNQ9ULZ1 77 aa7.42□□□□□ -1.22
USP35-207ENST00000530546 TENM2Q9NT68 2774 aa7.42□□□□□ -1.22
USP35-207ENST00000530546 PSPHP1O15172 72 aa7.42□□□□□ -1.22
USP35-207ENST00000530546 LINC00528Q8N1L1 170 aa7.42□□□□□ -1.22
USP35-207ENST00000530546 TLX1NBP0CAT3 122 aa7.41□□□□□ -1.22
USP35-207ENST00000530546 DNAH10Q8IVF4 4471 aa7.41□□□□□ -1.22
USP35-207ENST00000530546 DEFB105AQ8NG35 78 aa7.41□□□□□ -1.22
USP35-207ENST00000530546 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.4□□□□□ -1.22
USP35-207ENST00000530546 ETDCA0A1B0GVM5 59 aa7.4□□□□□ -1.22
USP35-207ENST00000530546 C3orf84H3BNL1 204 aa7.4□□□□□ -1.22
USP35-207ENST00000530546 IGKV2-24A0A0C4DH68 120 aa7.39□□□□□ -1.23
USP35-207ENST00000530546 NDUFB1O75438 58 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms