RNA–Protein interactions for RNA: ENST00000525633.1

ATPAF1-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 4

Gene ATPAF1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-207ENST00000525633 SNHG12Q9BXW3 62 aa3.98□□□□□ -1.77
ATPAF1-207ENST00000525633 TMEM126AQ9H061 195 aa3.98□□□□□ -1.77
ATPAF1-207ENST00000525633 PRO1854Q9UHT4 67 aa3.98□□□□□ -1.77
ATPAF1-207ENST00000525633 VPS13BQ7Z7G8 4022 aa3.97□□□□□ -1.77
ATPAF1-207ENST00000525633 IGLV1-50A0A075B6I6 118 aa3.97□□□□□ -1.77
ATPAF1-207ENST00000525633 A0A1B0GWB2 263 aa3.97□□□□□ -1.77
ATPAF1-207ENST00000525633 IGLV6-57P01721 117 aa3.97□□□□□ -1.77
ATPAF1-207ENST00000525633 INAFM2P0DMQ5 153 aa3.97□□□□□ -1.77
ATPAF1-207ENST00000525633 KRTAP11-1Q8IUC1 163 aa3.97□□□□□ -1.77
ATPAF1-207ENST00000525633 TRAV23DV6A0A075B6W5 121 aa3.96□□□□□ -1.78
ATPAF1-207ENST00000525633 SMR3BP02814 79 aaPredicted RBP3.96□□□□□ -1.78
ATPAF1-207ENST00000525633 SMIM11BQ8TCY0 68 aa3.96□□□□□ -1.78
ATPAF1-207ENST00000525633 PRYO14603 147 aa3.95□□□□□ -1.78
ATPAF1-207ENST00000525633 TSPAN13O95857 204 aa3.95□□□□□ -1.78
ATPAF1-207ENST00000525633 PSMB2P49721 201 aa3.95□□□□□ -1.78
ATPAF1-207ENST00000525633 COL5A1-AS1Q5SY13 56 aa3.95□□□□□ -1.78
ATPAF1-207ENST00000525633 REG3GQ6UW15 175 aa3.95□□□□□ -1.78
ATPAF1-207ENST00000525633 NAA38Q9BRA0 125 aaKnown RBP3.95□□□□□ -1.78
ATPAF1-207ENST00000525633 KCNQ1DNQ9H478 68 aa3.95□□□□□ -1.78
ATPAF1-207ENST00000525633 CBY1Q9Y3M2 126 aa3.95□□□□□ -1.78
ATPAF1-207ENST00000525633 DMBT1Q9UGM3 2413 aaPredicted RBP3.94□□□□□ -1.78
ATPAF1-207ENST00000525633 ETDCA0A1B0GVM5 59 aa3.94□□□□□ -1.78
ATPAF1-207ENST00000525633 TAX1BP3O14907 124 aa3.94□□□□□ -1.78
ATPAF1-207ENST00000525633 ZNF73O43830 326 aaPredicted RBP3.94□□□□□ -1.78
ATPAF1-207ENST00000525633 RPL28P46779 137 aaKnown RBP3.94□□□□□ -1.78
ATPAF1-207ENST00000525633 C6orf99Q4VX62 202 aa3.94□□□□□ -1.78
ATPAF1-207ENST00000525633 C1orf137Q5JT78 98 aa3.94□□□□□ -1.78
ATPAF1-207ENST00000525633 Q5VSD8 79 aa3.94□□□□□ -1.78
ATPAF1-207ENST00000525633 DIRC1Q969H9 104 aa3.94□□□□□ -1.78
ATPAF1-207ENST00000525633 PSORS1C2Q9UIG4 136 aa3.94□□□□□ -1.78
ATPAF1-207ENST00000525633 SRRM2Q9UQ35 2752 aaKnown RBP3.94□□□□□ -1.78
ATPAF1-207ENST00000525633 HMCN2Q8NDA2 5059 aa3.93□□□□□ -1.78
ATPAF1-207ENST00000525633 FAM229AH3BQW9 127 aa3.93□□□□□ -1.78
ATPAF1-207ENST00000525633 H3BUT2 72 aa3.93□□□□□ -1.78
ATPAF1-207ENST00000525633 TRIAP1O43715 76 aa3.93□□□□□ -1.78
ATPAF1-207ENST00000525633 SCGB1C2P0DMR2 95 aa3.93□□□□□ -1.78
ATPAF1-207ENST00000525633 COX7BP24311 80 aa3.93□□□□□ -1.78
ATPAF1-207ENST00000525633 VAMP3Q15836 100 aa3.93□□□□□ -1.78
ATPAF1-207ENST00000525633 FAM19A1Q7Z5A9 133 aa3.93□□□□□ -1.78
ATPAF1-207ENST00000525633 LINC00528Q8N1L1 170 aa3.93□□□□□ -1.78
ATPAF1-207ENST00000525633 C9orf118A6NHY6 69 aa3.92□□□□□ -1.78
ATPAF1-207ENST00000525633 B5MCH6 92 aa3.92□□□□□ -1.78
ATPAF1-207ENST00000525633 BCE1O60756 84 aa3.92□□□□□ -1.78
ATPAF1-207ENST00000525633 UBE2AP49459 152 aa3.92□□□□□ -1.78
ATPAF1-207ENST00000525633 RPL37AP61513 92 aaKnown RBP3.92□□□□□ -1.78
ATPAF1-207ENST00000525633 TRBV7-6A0A0J9YX20 115 aa3.91□□□□□ -1.78
ATPAF1-207ENST00000525633 KRTAP4-16G5E9R7 235 aaPredicted RBP3.91□□□□□ -1.78
ATPAF1-207ENST00000525633 COX6CP09669 75 aa3.91□□□□□ -1.78
ATPAF1-207ENST00000525633 SPRR1AP35321 89 aa3.91□□□□□ -1.78
ATPAF1-207ENST00000525633 PRLHP81277 87 aa3.91□□□□□ -1.78
ATPAF1-207ENST00000525633 H0YGX0 51 aa3.9□□□□□ -1.79
ATPAF1-207ENST00000525633 IGLV7-43P04211 117 aa3.9□□□□□ -1.79
ATPAF1-207ENST00000525633 ELOF1P60002 83 aaKnown RBP3.9□□□□□ -1.79
ATPAF1-207ENST00000525633 CLEC2BQ92478 149 aa3.9□□□□□ -1.79
ATPAF1-207ENST00000525633 HIGD2AQ9BW72 106 aa3.9□□□□□ -1.79
ATPAF1-207ENST00000525633 FLG2Q5D862 2391 aaPredicted RBP3.9□□□□□ -1.79
ATPAF1-207ENST00000525633 PKHD1L1Q86WI1 4243 aa3.9□□□□□ -1.79
ATPAF1-207ENST00000525633 LRP1Q07954 4544 aaKnown RBP3.89□□□□□ -1.79
ATPAF1-207ENST00000525633 FAT3Q8TDW7 4589 aa3.89□□□□□ -1.79
ATPAF1-207ENST00000525633 A0A1W2PPM0 123 aa3.89□□□□□ -1.79
ATPAF1-207ENST00000525633 SLC25A20O43772 301 aa3.89□□□□□ -1.79
ATPAF1-207ENST00000525633 FABP2P12104 132 aa3.89□□□□□ -1.79
ATPAF1-207ENST00000525633 LINC00575Q6W349 94 aa3.89□□□□□ -1.79
ATPAF1-207ENST00000525633 Q6ZRX8 168 aa3.89□□□□□ -1.79
ATPAF1-207ENST00000525633 SMCR5Q8TEV8 140 aa3.89□□□□□ -1.79
ATPAF1-207ENST00000525633 FAM218AQ96MZ4 157 aa3.89□□□□□ -1.79
ATPAF1-207ENST00000525633 Q9BRP9 147 aa3.89□□□□□ -1.79
ATPAF1-207ENST00000525633 UBR4Q5T4S7 5183 aa3.89□□□□□ -1.79
ATPAF1-207ENST00000525633 hADV29S1A0JD25 119 aa3.88□□□□□ -1.79
ATPAF1-207ENST00000525633 H0Y9J4 135 aa3.88□□□□□ -1.79
ATPAF1-207ENST00000525633 ZNF861PO60384 105 aa3.88□□□□□ -1.79
ATPAF1-207ENST00000525633 ERC2-IT1O76042 136 aa3.88□□□□□ -1.79
ATPAF1-207ENST00000525633 SNCGO76070 127 aa3.88□□□□□ -1.79
ATPAF1-207ENST00000525633 PLA2G1BP04054 148 aaKnown RBP3.88□□□□□ -1.79
ATPAF1-207ENST00000525633 LYRM7Q5U5X0 104 aa3.88□□□□□ -1.79
ATPAF1-207ENST00000525633 KRTAP13-1Q8IUC0 172 aa3.88□□□□□ -1.79
ATPAF1-207ENST00000525633 DHRS4-AS1Q9P1J3 65 aa3.88□□□□□ -1.79
ATPAF1-207ENST00000525633 J3QL48 77 aa3.87□□□□□ -1.79
ATPAF1-207ENST00000525633 TCL1BO95988 128 aa3.87□□□□□ -1.79
ATPAF1-207ENST00000525633 ATXN8Q156A1 80 aa3.87□□□□□ -1.79
ATPAF1-207ENST00000525633 ST20-AS1Q8NBB2 130 aa3.87□□□□□ -1.79
ATPAF1-207ENST00000525633 SPCS1Q9Y6A9 102 aa3.87□□□□□ -1.79
ATPAF1-207ENST00000525633 KRTAP29-1A8MX34 341 aaPredicted RBP3.86□□□□□ -1.79
ATPAF1-207ENST00000525633 KRTAP10-4P60372 401 aaPredicted RBP3.86□□□□□ -1.79
ATPAF1-207ENST00000525633 DEFB105AQ8NG35 78 aa3.86□□□□□ -1.79
ATPAF1-207ENST00000525633 A0A1B0GV90 55 aa3.85□□□□□ -1.79
ATPAF1-207ENST00000525633 LST1O00453 97 aa3.85□□□□□ -1.79
ATPAF1-207ENST00000525633 DNAL4O96015 105 aa3.85□□□□□ -1.79
ATPAF1-207ENST00000525633 GAGE2AQ6NT46 116 aa3.85□□□□□ -1.79
ATPAF1-207ENST00000525633 Q6ZQY7 126 aa3.85□□□□□ -1.79
ATPAF1-207ENST00000525633 TRBV20-1A0A075B6N2 111 aa3.84□□□□□ -1.79
ATPAF1-207ENST00000525633 A0A1B0GX51 115 aa3.84□□□□□ -1.79
ATPAF1-207ENST00000525633 K7EP34 96 aa3.84□□□□□ -1.79
ATPAF1-207ENST00000525633 TRACP01848 142 aa3.84□□□□□ -1.79
ATPAF1-207ENST00000525633 SPINK6Q6UWN8 80 aa3.84□□□□□ -1.79
ATPAF1-207ENST00000525633 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.84□□□□□ -1.79
ATPAF1-207ENST00000525633 C9JAW5 83 aa3.83□□□□□ -1.8
ATPAF1-207ENST00000525633 H3BMG7 143 aa3.83□□□□□ -1.8
ATPAF1-207ENST00000525633 BAALC-AS2P0C853 105 aa3.83□□□□□ -1.8
ATPAF1-207ENST00000525633 GTF2H5Q6ZYL4 71 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms