RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 B5MCH6 92 aa7.47□□□□□ -1.21
TRAPPC4-205ENST00000525079 ZNF706Q9Y5V0 76 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC4-205ENST00000525079 IGLV6-57P01721 117 aa7.46□□□□□ -1.22
TRAPPC4-205ENST00000525079 ATOH7Q8N100 152 aa7.46□□□□□ -1.22
TRAPPC4-205ENST00000525079 LINC00308Q8TCZ7 52 aa7.46□□□□□ -1.22
TRAPPC4-205ENST00000525079 ERC2-IT1O76042 136 aa7.45□□□□□ -1.22
TRAPPC4-205ENST00000525079 RETNLBQ9BQ08 111 aa7.45□□□□□ -1.22
TRAPPC4-205ENST00000525079 TRAV23DV6A0A075B6W5 121 aa7.44□□□□□ -1.22
TRAPPC4-205ENST00000525079 C20orf202A1L168 122 aa7.44□□□□□ -1.22
TRAPPC4-205ENST00000525079 TIMM17BO60830 172 aa7.44□□□□□ -1.22
TRAPPC4-205ENST00000525079 ANKRD39Q53RE8 183 aa7.44□□□□□ -1.22
TRAPPC4-205ENST00000525079 GAGE2AQ6NT46 116 aa7.44□□□□□ -1.22
TRAPPC4-205ENST00000525079 Q9BRP9 147 aa7.44□□□□□ -1.22
TRAPPC4-205ENST00000525079 Q6ZRX8 168 aa7.43□□□□□ -1.22
TRAPPC4-205ENST00000525079 OR13C6PQ8NH95 151 aa7.43□□□□□ -1.22
TRAPPC4-205ENST00000525079 CTAG1AP78358 180 aa7.42□□□□□ -1.22
TRAPPC4-205ENST00000525079 SPANXCQ9NY87 97 aa7.42□□□□□ -1.22
TRAPPC4-205ENST00000525079 ZNF73O43830 326 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC4-205ENST00000525079 SCGB1D4Q6XE38 83 aa7.41□□□□□ -1.22
TRAPPC4-205ENST00000525079 RNF213Q63HN8 5207 aa7.4□□□□□ -1.22
TRAPPC4-205ENST00000525079 LOC105371267A0A1B0GV96 52 aa7.4□□□□□ -1.22
TRAPPC4-205ENST00000525079 LINC00483Q53H64 154 aa7.4□□□□□ -1.22
TRAPPC4-205ENST00000525079 HIST3H2BBQ8N257 126 aa7.4□□□□□ -1.22
TRAPPC4-205ENST00000525079 IGLV9-49A0A0B4J1Y8 123 aa7.39□□□□□ -1.23
TRAPPC4-205ENST00000525079 LCE2BO14633 110 aa7.39□□□□□ -1.23
TRAPPC4-205ENST00000525079 PCP2Q8IVA1 136 aa7.39□□□□□ -1.23
TRAPPC4-205ENST00000525079 Q8NBF4 154 aa7.39□□□□□ -1.23
TRAPPC4-205ENST00000525079 S100A2P29034 98 aa7.38□□□□□ -1.23
TRAPPC4-205ENST00000525079 JOSD1Q15040 202 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC4-205ENST00000525079 HIST1H2BLQ99880 126 aa7.38□□□□□ -1.23
TRAPPC4-205ENST00000525079 SPANXDQ9BXN6 97 aa7.38□□□□□ -1.23
TRAPPC4-205ENST00000525079 HINT1P49773 126 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC4-205ENST00000525079 SPAG11AQ6PDA7 123 aa7.37□□□□□ -1.23
TRAPPC4-205ENST00000525079 ST20-AS1Q8NBB2 130 aa7.37□□□□□ -1.23
TRAPPC4-205ENST00000525079 MOBPQ13875 183 aa7.36□□□□□ -1.23
TRAPPC4-205ENST00000525079 CBY1Q9Y3M2 126 aa7.36□□□□□ -1.23
TRAPPC4-205ENST00000525079 S100A6P06703 90 aa7.35□□□□□ -1.23
TRAPPC4-205ENST00000525079 MUSTN1Q8IVN3 82 aa7.35□□□□□ -1.23
TRAPPC4-205ENST00000525079 LINC00518Q8N0U6 118 aa7.35□□□□□ -1.23
TRAPPC4-205ENST00000525079 IGLV7-46A0A075B6I9 117 aa7.34□□□□□ -1.23
TRAPPC4-205ENST00000525079 AKR1D1P51857 326 aa7.34□□□□□ -1.23
TRAPPC4-205ENST00000525079 IFITM1P13164 125 aa7.33□□□□□ -1.24
TRAPPC4-205ENST00000525079 C6orf99Q4VX62 202 aa7.33□□□□□ -1.24
TRAPPC4-205ENST00000525079 A6NDN8 102 aa7.32□□□□□ -1.24
TRAPPC4-205ENST00000525079 COX7BP24311 80 aa7.32□□□□□ -1.24
TRAPPC4-205ENST00000525079 SNRPEP62304 92 aaKnown RBP7.32□□□□□ -1.24
TRAPPC4-205ENST00000525079 C9orf153Q5TBE3 101 aa7.32□□□□□ -1.24
TRAPPC4-205ENST00000525079 SSBP3-AS1Q7Z2R9 100 aa7.32□□□□□ -1.24
TRAPPC4-205ENST00000525079 Q6ZVH6 145 aa7.31□□□□□ -1.24
TRAPPC4-205ENST00000525079 COPS9Q8WXC6 57 aa7.31□□□□□ -1.24
TRAPPC4-205ENST00000525079 DHRS4-AS1Q9P1J3 65 aa7.31□□□□□ -1.24
TRAPPC4-205ENST00000525079 SPINK1P00995 79 aa7.3□□□□□ -1.24
TRAPPC4-205ENST00000525079 ELOF1P60002 83 aaKnown RBP7.3□□□□□ -1.24
TRAPPC4-205ENST00000525079 HSBP1L1C9JCN9 74 aa7.29□□□□□ -1.24
TRAPPC4-205ENST00000525079 CDIP1Q9H305 208 aa7.29□□□□□ -1.24
TRAPPC4-205ENST00000525079 C5orf52A6NGY3 159 aa7.28□□□□□ -1.24
TRAPPC4-205ENST00000525079 SCGB1D1O95968 90 aa7.28□□□□□ -1.24
TRAPPC4-205ENST00000525079 TPRXLQ17RH7 258 aa7.28□□□□□ -1.24
TRAPPC4-205ENST00000525079 DEFB105AQ8NG35 78 aa7.28□□□□□ -1.24
TRAPPC4-205ENST00000525079 TAL2Q16559 108 aa7.27□□□□□ -1.25
TRAPPC4-205ENST00000525079 SPRR1BP22528 89 aa7.26□□□□□ -1.25
TRAPPC4-205ENST00000525079 TRAV13-2A0A0B4J235 113 aa7.25□□□□□ -1.25
TRAPPC4-205ENST00000525079 TRBV7-6A0A0J9YX20 115 aa7.25□□□□□ -1.25
TRAPPC4-205ENST00000525079 FP248Q71RG6 208 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC4-205ENST00000525079 Q8N377 158 aa7.25□□□□□ -1.25
TRAPPC4-205ENST00000525079 SMIM11BQ8TCY0 68 aa7.25□□□□□ -1.25
TRAPPC4-205ENST00000525079 A0A1B0GWB2 263 aa7.24□□□□□ -1.25
TRAPPC4-205ENST00000525079 Q1RN00 199 aa7.24□□□□□ -1.25
TRAPPC4-205ENST00000525079 HRCT1Q6UXD1 115 aa7.24□□□□□ -1.25
TRAPPC4-205ENST00000525079 LAMTOR3Q9UHA4 124 aa7.24□□□□□ -1.25
TRAPPC4-205ENST00000525079 TMA7Q9Y2S6 64 aaKnown RBP7.24□□□□□ -1.25
TRAPPC4-205ENST00000525079 A4D1N5 150 aa7.23□□□□□ -1.25
TRAPPC4-205ENST00000525079 SLC25A34Q6PIV7 304 aa7.23□□□□□ -1.25
TRAPPC4-205ENST00000525079 SLC25A20O43772 301 aa7.22□□□□□ -1.25
TRAPPC4-205ENST00000525079 RPS29P62273 56 aaKnown RBP7.22□□□□□ -1.25
TRAPPC4-205ENST00000525079 TEX49A0A1B0GTD5 131 aa7.21□□□□□ -1.26
TRAPPC4-205ENST00000525079 LINC01547P58512 204 aaPredicted RBP7.2□□□□□ -1.26
TRAPPC4-205ENST00000525079 KRTAP13-3Q3SY46 172 aa7.2□□□□□ -1.26
TRAPPC4-205ENST00000525079 C12orf57Q99622 126 aa7.2□□□□□ -1.26
TRAPPC4-205ENST00000525079 COX8AP10176 69 aa7.19□□□□□ -1.26
TRAPPC4-205ENST00000525079 SMIM29Q86T20 159 aa7.19□□□□□ -1.26
TRAPPC4-205ENST00000525079 HIST1H4GQ99525 98 aa7.19□□□□□ -1.26
TRAPPC4-205ENST00000525079 C14orf144Q96I85 54 aa7.18□□□□□ -1.26
TRAPPC4-205ENST00000525079 IGLV5-48A0A075B6I7 105 aa7.17□□□□□ -1.26
TRAPPC4-205ENST00000525079 A0A0G2JQZ4 141 aa7.17□□□□□ -1.26
TRAPPC4-205ENST00000525079 VAMP3Q15836 100 aa7.17□□□□□ -1.26
TRAPPC4-205ENST00000525079 NHP2Q9NX24 153 aaKnown RBP7.17□□□□□ -1.26
TRAPPC4-205ENST00000525079 PAM16Q9Y3D7 125 aa7.17□□□□□ -1.26
TRAPPC4-205ENST00000525079 MUC2Q02817 5179 aa7.16□□□□□ -1.26
TRAPPC4-205ENST00000525079 PRO1933Q9H354 126 aa7.16□□□□□ -1.26
TRAPPC4-205ENST00000525079 H7C2G1 150 aa7.15□□□□□ -1.26
TRAPPC4-205ENST00000525079 DLEU1O43261 78 aa7.15□□□□□ -1.26
TRAPPC4-205ENST00000525079 SPATA45Q537H7 98 aa7.15□□□□□ -1.26
TRAPPC4-205ENST00000525079 LINC00575Q6W349 94 aa7.15□□□□□ -1.26
TRAPPC4-205ENST00000525079 MUC17Q685J3 4493 aa7.15□□□□□ -1.27
TRAPPC4-205ENST00000525079 LIMD2Q9BT23 127 aa7.14□□□□□ -1.27
TRAPPC4-205ENST00000525079 VAMP8Q9BV40 100 aa7.13□□□□□ -1.27
TRAPPC4-205ENST00000525079 hADV29S1A0JD25 119 aa7.12□□□□□ -1.27
TRAPPC4-205ENST00000525079 Q6ZQY7 126 aa7.12□□□□□ -1.27
TRAPPC4-205ENST00000525079 A0A0U1RQV1 116 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms