RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 RPS10P5Q9NQ39 176 aa7.85□□□□□ -1.15
CSTF3-204ENST00000524556 RHEBQ15382 184 aa7.84□□□□□ -1.15
CSTF3-204ENST00000524556 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.83□□□□□ -1.16
CSTF3-204ENST00000524556 LEPROTO15243 131 aa7.83□□□□□ -1.16
CSTF3-204ENST00000524556 IFITM2Q01629 132 aa7.83□□□□□ -1.16
CSTF3-204ENST00000524556 SLC25A34Q6PIV7 304 aa7.83□□□□□ -1.16
CSTF3-204ENST00000524556 CHCHD1Q96BP2 118 aaKnown RBP7.83□□□□□ -1.16
CSTF3-204ENST00000524556 LAMTOR3Q9UHA4 124 aa7.82□□□□□ -1.16
CSTF3-204ENST00000524556 SSPOA2VEC9 5147 aa7.81□□□□□ -1.16
CSTF3-204ENST00000524556 HINT1P49773 126 aaPredicted RBP7.81□□□□□ -1.16
CSTF3-204ENST00000524556 RPL37P61927 97 aaKnown RBP7.81□□□□□ -1.16
CSTF3-204ENST00000524556 CD164Q04900 197 aa7.81□□□□□ -1.16
CSTF3-204ENST00000524556 C10orf91Q5T1B1 145 aa7.81□□□□□ -1.16
CSTF3-204ENST00000524556 COMMD7Q86VX2 200 aa7.81□□□□□ -1.16
CSTF3-204ENST00000524556 J3QQQ9 107 aa7.8□□□□□ -1.16
CSTF3-204ENST00000524556 USH2AO75445 5202 aa7.79□□□□□ -1.16
CSTF3-204ENST00000524556 EIF4EBP3O60516 100 aaPredicted RBP7.79□□□□□ -1.16
CSTF3-204ENST00000524556 SOSTDC1Q6X4U4 206 aa7.79□□□□□ -1.16
CSTF3-204ENST00000524556 NMUP48645 174 aa7.78□□□□□ -1.16
CSTF3-204ENST00000524556 DHRS4-AS1Q9P1J3 65 aa7.78□□□□□ -1.16
CSTF3-204ENST00000524556 CBY1Q9Y3M2 126 aa7.78□□□□□ -1.16
CSTF3-204ENST00000524556 H0Y8G0 127 aa7.77□□□□□ -1.17
CSTF3-204ENST00000524556 H7C2G1 150 aa7.77□□□□□ -1.17
CSTF3-204ENST00000524556 NPC2P61916 151 aa7.77□□□□□ -1.17
CSTF3-204ENST00000524556 C1orf195Q5TG92 126 aa7.77□□□□□ -1.17
CSTF3-204ENST00000524556 Q5XG85 94 aa7.77□□□□□ -1.17
CSTF3-204ENST00000524556 PRO1933Q9H354 126 aa7.76□□□□□ -1.17
CSTF3-204ENST00000524556 LGALS3P17931 250 aaKnown RBP7.75□□□□□ -1.17
CSTF3-204ENST00000524556 ADAMTSL4-AS1Q5T5F5 129 aa7.75□□□□□ -1.17
CSTF3-204ENST00000524556 HSBP1O75506 76 aa7.74□□□□□ -1.17
CSTF3-204ENST00000524556 PLNP26678 52 aa7.74□□□□□ -1.17
CSTF3-204ENST00000524556 HERVK_113P61574 105 aa7.74□□□□□ -1.17
CSTF3-204ENST00000524556 Q1RN00 199 aa7.74□□□□□ -1.17
CSTF3-204ENST00000524556 TAL2Q16559 108 aa7.73□□□□□ -1.17
CSTF3-204ENST00000524556 A0A0J9YXY3 114 aa7.72□□□□□ -1.17
CSTF3-204ENST00000524556 OR13C6PQ8NH95 151 aa7.72□□□□□ -1.17
CSTF3-204ENST00000524556 DPM2O94777 84 aa7.71□□□□□ -1.18
CSTF3-204ENST00000524556 AKR1D1P51857 326 aa7.71□□□□□ -1.18
CSTF3-204ENST00000524556 DEFB105AQ8NG35 78 aa7.71□□□□□ -1.18
CSTF3-204ENST00000524556 TEX49A0A1B0GTD5 131 aa7.7□□□□□ -1.18
CSTF3-204ENST00000524556 LEPROTL1O95214 131 aa7.7□□□□□ -1.18
CSTF3-204ENST00000524556 ELOF1P60002 83 aaKnown RBP7.7□□□□□ -1.18
CSTF3-204ENST00000524556 SMIM29Q86T20 159 aa7.7□□□□□ -1.18
CSTF3-204ENST00000524556 COX7BP24311 80 aa7.69□□□□□ -1.18
CSTF3-204ENST00000524556 PMCHL2Q9BQD1 86 aa7.69□□□□□ -1.18
CSTF3-204ENST00000524556 SPANXCQ9NY87 97 aa7.69□□□□□ -1.18
CSTF3-204ENST00000524556 IGKCP01834 107 aa7.68□□□□□ -1.18
CSTF3-204ENST00000524556 Q6Q795 121 aa7.68□□□□□ -1.18
CSTF3-204ENST00000524556 LINC00308Q8TCZ7 52 aa7.68□□□□□ -1.18
CSTF3-204ENST00000524556 A0A0G2JQZ4 141 aa7.67□□□□□ -1.18
CSTF3-204ENST00000524556 YPEL4Q96NS1 127 aa7.67□□□□□ -1.18
CSTF3-204ENST00000524556 SPANXDQ9BXN6 97 aa7.67□□□□□ -1.18
CSTF3-204ENST00000524556 FCGBPQ9Y6R7 5405 aaPredicted RBP7.66□□□□□ -1.18
CSTF3-204ENST00000524556 CFC1P0CG37 223 aa7.66□□□□□ -1.18
CSTF3-204ENST00000524556 C6orf99Q4VX62 202 aa7.66□□□□□ -1.18
CSTF3-204ENST00000524556 APOC3P02656 99 aa7.65□□□□□ -1.18
CSTF3-204ENST00000524556 LITAFQ99732 161 aa7.65□□□□□ -1.18
CSTF3-204ENST00000524556 E9PLD3 99 aa7.64□□□□□ -1.19
CSTF3-204ENST00000524556 SNAPINO95295 136 aa7.64□□□□□ -1.19
CSTF3-204ENST00000524556 LINC00310P59036 64 aa7.64□□□□□ -1.19
CSTF3-204ENST00000524556 KRTAP9-8Q9BYQ0 159 aa7.64□□□□□ -1.19
CSTF3-204ENST00000524556 HSPB8Q9UJY1 196 aa7.64□□□□□ -1.19
CSTF3-204ENST00000524556 TCL1BO95988 128 aa7.63□□□□□ -1.19
CSTF3-204ENST00000524556 IGLV5-48A0A075B6I7 105 aa7.62□□□□□ -1.19
CSTF3-204ENST00000524556 TIMM17BO60830 172 aa7.62□□□□□ -1.19
CSTF3-204ENST00000524556 SERF1AO75920 110 aa7.62□□□□□ -1.19
CSTF3-204ENST00000524556 FABP4P15090 132 aa7.62□□□□□ -1.19
CSTF3-204ENST00000524556 TRBV7-6A0A0J9YX20 115 aa7.61□□□□□ -1.19
CSTF3-204ENST00000524556 LINC00518Q8N0U6 118 aa7.61□□□□□ -1.19
CSTF3-204ENST00000524556 SVBPQ8N300 66 aa7.61□□□□□ -1.19
CSTF3-204ENST00000524556 ATP11AUNQ6ZP68 121 aa7.6□□□□□ -1.19
CSTF3-204ENST00000524556 NDUFA5Q16718 116 aa7.59□□□□□ -1.19
CSTF3-204ENST00000524556 A0A1B0GWB2 263 aa7.58□□□□□ -1.2
CSTF3-204ENST00000524556 Q75L30 129 aa7.58□□□□□ -1.2
CSTF3-204ENST00000524556 TRGC2P03986 189 aa7.57□□□□□ -1.2
CSTF3-204ENST00000524556 PCP2Q8IVA1 136 aa7.56□□□□□ -1.2
CSTF3-204ENST00000524556 OBSCN-AS1Q96MR7 158 aa7.55□□□□□ -1.2
CSTF3-204ENST00000524556 C20orf202A1L168 122 aa7.54□□□□□ -1.2
CSTF3-204ENST00000524556 ZNF815PA8K554 130 aa7.53□□□□□ -1.2
CSTF3-204ENST00000524556 A4D1N5 150 aa7.52□□□□□ -1.21
CSTF3-204ENST00000524556 KRTAP19-1Q8IUB9 90 aa7.51□□□□□ -1.21
CSTF3-204ENST00000524556 TTTY13Q9BZ97 58 aa7.5□□□□□ -1.21
CSTF3-204ENST00000524556 NHP2Q9NX24 153 aaKnown RBP7.5□□□□□ -1.21
CSTF3-204ENST00000524556 A6NDN8 102 aa7.49□□□□□ -1.21
CSTF3-204ENST00000524556 F8WEM9 126 aa7.49□□□□□ -1.21
CSTF3-204ENST00000524556 TRBV7-7A0A0K0K1E9 115 aa7.48□□□□□ -1.21
CSTF3-204ENST00000524556 SYS1-DBNDD2H3BUS1 97 aa7.48□□□□□ -1.21
CSTF3-204ENST00000524556 MT2AP02795 61 aa7.48□□□□□ -1.21
CSTF3-204ENST00000524556 MACF1Q9UPN3 7388 aaKnown RBP7.47□□□□□ -1.21
CSTF3-204ENST00000524556 LCE2BO14633 110 aa7.47□□□□□ -1.21
CSTF3-204ENST00000524556 Q6JHZ5 121 aa7.46□□□□□ -1.22
CSTF3-204ENST00000524556 COPS9Q8WXC6 57 aa7.46□□□□□ -1.22
CSTF3-204ENST00000524556 Q96NJ1 140 aa7.46□□□□□ -1.22
CSTF3-204ENST00000524556 TRBV20-1A0A075B6N2 111 aa7.45□□□□□ -1.22
CSTF3-204ENST00000524556 LINC01545Q5VT33 79 aa7.45□□□□□ -1.22
CSTF3-204ENST00000524556 IGFL1Q6UW32 110 aa7.45□□□□□ -1.22
CSTF3-204ENST00000524556 CLEC2BQ92478 149 aa7.45□□□□□ -1.22
CSTF3-204ENST00000524556 IFITM1P13164 125 aa7.44□□□□□ -1.22
CSTF3-204ENST00000524556 SMIM11BQ8TCY0 68 aa7.44□□□□□ -1.22
CSTF3-204ENST00000524556 SYNE2Q8WXH0 6885 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms