RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 PRO1854Q9UHT4 67 aa7.71□□□□□ -1.18
VEGFA-225ENST00000523950 MYCBP2O75592 4640 aa7.7□□□□□ -1.18
VEGFA-225ENST00000523950 VPREB1P12018 145 aa7.7□□□□□ -1.18
VEGFA-225ENST00000523950 IFITM1P13164 125 aa7.7□□□□□ -1.18
VEGFA-225ENST00000523950 REG3GQ6UW15 175 aa7.7□□□□□ -1.18
VEGFA-225ENST00000523950 LINC00167Q96N53 147 aa7.7□□□□□ -1.18
VEGFA-225ENST00000523950 NAA38Q9BRA0 125 aaKnown RBP7.7□□□□□ -1.18
VEGFA-225ENST00000523950 SPANXDQ9BXN6 97 aa7.7□□□□□ -1.18
VEGFA-225ENST00000523950 SPANXCQ9NY87 97 aa7.7□□□□□ -1.18
VEGFA-225ENST00000523950 H3BMG7 143 aa7.69□□□□□ -1.18
VEGFA-225ENST00000523950 MIR7-3HGQ8N6C7 128 aa7.69□□□□□ -1.18
VEGFA-225ENST00000523950 A0A0U1RRA0 63 aa7.68□□□□□ -1.18
VEGFA-225ENST00000523950 TSPAN13O95857 204 aa7.68□□□□□ -1.18
VEGFA-225ENST00000523950 PCP4P48539 62 aa7.68□□□□□ -1.18
VEGFA-225ENST00000523950 DIRC1Q969H9 104 aa7.68□□□□□ -1.18
VEGFA-225ENST00000523950 CFC1BP0CG36 223 aa7.67□□□□□ -1.18
VEGFA-225ENST00000523950 CFC1P0CG37 223 aa7.67□□□□□ -1.18
VEGFA-225ENST00000523950 PRO0461Q9UI25 63 aa7.67□□□□□ -1.18
VEGFA-225ENST00000523950 LOC107984156A0A0G2JMH3 177 aa7.66□□□□□ -1.18
VEGFA-225ENST00000523950 ARL17AQ8IVW1 177 aa7.66□□□□□ -1.18
VEGFA-225ENST00000523950 LINC01600Q96MT4 127 aa7.66□□□□□ -1.18
VEGFA-225ENST00000523950 FAT3Q8TDW7 4589 aa7.66□□□□□ -1.18
VEGFA-225ENST00000523950 RPL37AP8A6NKH3 93 aa7.65□□□□□ -1.18
VEGFA-225ENST00000523950 H0Y9J4 135 aa7.65□□□□□ -1.18
VEGFA-225ENST00000523950 ZNF861PO60384 105 aa7.65□□□□□ -1.18
VEGFA-225ENST00000523950 BCE1O60756 84 aa7.65□□□□□ -1.18
VEGFA-225ENST00000523950 SCGB1A1P11684 91 aa7.65□□□□□ -1.18
VEGFA-225ENST00000523950 IGLV1-50A0A075B6I6 118 aa7.64□□□□□ -1.19
VEGFA-225ENST00000523950 A4D1N5 150 aa7.64□□□□□ -1.19
VEGFA-225ENST00000523950 M0R378 163 aa7.64□□□□□ -1.19
VEGFA-225ENST00000523950 Q8NDZ9 215 aa7.64□□□□□ -1.19
VEGFA-225ENST00000523950 COX6CP09669 75 aa7.63□□□□□ -1.19
VEGFA-225ENST00000523950 RPL28P46779 137 aaKnown RBP7.63□□□□□ -1.19
VEGFA-225ENST00000523950 MUSTN1Q8IVN3 82 aa7.63□□□□□ -1.19
VEGFA-225ENST00000523950 LITAFQ99732 161 aa7.63□□□□□ -1.19
VEGFA-225ENST00000523950 LRP1Q07954 4544 aaKnown RBP7.62□□□□□ -1.19
VEGFA-225ENST00000523950 IGKV2-28A0A075B6P5 120 aa7.62□□□□□ -1.19
VEGFA-225ENST00000523950 IGKV2D-28P01615 120 aa7.62□□□□□ -1.19
VEGFA-225ENST00000523950 SCGB1C2P0DMR2 95 aa7.62□□□□□ -1.19
VEGFA-225ENST00000523950 DMBT1Q9UGM3 2413 aaPredicted RBP7.62□□□□□ -1.19
VEGFA-225ENST00000523950 TRBV10-2A0A0K0K1G8 114 aa7.61□□□□□ -1.19
VEGFA-225ENST00000523950 NDUFC2O95298 119 aa7.61□□□□□ -1.19
VEGFA-225ENST00000523950 MT1HL1P0DM35 61 aa7.61□□□□□ -1.19
VEGFA-225ENST00000523950 PSMB2P49721 201 aa7.61□□□□□ -1.19
VEGFA-225ENST00000523950 ATXN8Q156A1 80 aa7.61□□□□□ -1.19
VEGFA-225ENST00000523950 TEN1Q86WV5 123 aa7.61□□□□□ -1.19
VEGFA-225ENST00000523950 DAND5Q8N907 189 aa7.61□□□□□ -1.19
VEGFA-225ENST00000523950 PPDPFLQ8WWR9 84 aa7.61□□□□□ -1.19
VEGFA-225ENST00000523950 ETDBQ3ZM63 59 aa7.6□□□□□ -1.19
VEGFA-225ENST00000523950 TMEM126AQ9H061 195 aa7.6□□□□□ -1.19
VEGFA-225ENST00000523950 PRYO14603 147 aa7.59□□□□□ -1.19
VEGFA-225ENST00000523950 UBE2AP49459 152 aa7.59□□□□□ -1.19
VEGFA-225ENST00000523950 KRTAP13-1Q8IUC0 172 aa7.59□□□□□ -1.19
VEGFA-225ENST00000523950 NCR3O14931 201 aa7.58□□□□□ -1.2
VEGFA-225ENST00000523950 TCL1BO95988 128 aa7.58□□□□□ -1.2
VEGFA-225ENST00000523950 ADAMTSL4-AS1Q5T5F5 129 aa7.58□□□□□ -1.2
VEGFA-225ENST00000523950 SIGMAR1Q99720 223 aa7.58□□□□□ -1.2
VEGFA-225ENST00000523950 KRTAP10-8P60410 259 aa7.57□□□□□ -1.2
VEGFA-225ENST00000523950 Q1RN00 199 aa7.57□□□□□ -1.2
VEGFA-225ENST00000523950 H3BT86 120 aa7.56□□□□□ -1.2
VEGFA-225ENST00000523950 SOSTDC1Q6X4U4 206 aa7.56□□□□□ -1.2
VEGFA-225ENST00000523950 FAM19A1Q7Z5A9 133 aa7.56□□□□□ -1.2
VEGFA-225ENST00000523950 LINC00308Q8TCZ7 52 aa7.56□□□□□ -1.2
VEGFA-225ENST00000523950 KCNQ1DNQ9H478 68 aa7.56□□□□□ -1.2
VEGFA-225ENST00000523950 TRBV10-3A0A0K0K1G6 114 aa7.55□□□□□ -1.2
VEGFA-225ENST00000523950 SLC25A20O43772 301 aa7.55□□□□□ -1.2
VEGFA-225ENST00000523950 KRTAP1-4P0C5Y4 121 aa7.55□□□□□ -1.2
VEGFA-225ENST00000523950 SPRR1AP35321 89 aa7.55□□□□□ -1.2
VEGFA-225ENST00000523950 SMCPP49901 116 aaPredicted RBP7.55□□□□□ -1.2
VEGFA-225ENST00000523950 LINC00337Q8N6G1 96 aa7.55□□□□□ -1.2
VEGFA-225ENST00000523950 RPL13AP40429 203 aaKnown RBP7.54□□□□□ -1.2
VEGFA-225ENST00000523950 NPC2P61916 151 aa7.54□□□□□ -1.2
VEGFA-225ENST00000523950 TNXBP22105 4242 aa7.54□□□□□ -1.2
VEGFA-225ENST00000523950 IGLV6-57P01721 117 aa7.53□□□□□ -1.2
VEGFA-225ENST00000523950 PRLHP81277 87 aa7.53□□□□□ -1.2
VEGFA-225ENST00000523950 S100A7L2Q5SY68 101 aa7.53□□□□□ -1.2
VEGFA-225ENST00000523950 ANKRD29Q8N6D5 301 aa7.53□□□□□ -1.2
VEGFA-225ENST00000523950 C9JAW5 83 aa7.52□□□□□ -1.21
VEGFA-225ENST00000523950 EIF4EBP3O60516 100 aaPredicted RBP7.52□□□□□ -1.21
VEGFA-225ENST00000523950 HERC1Q15751 4861 aa7.51□□□□□ -1.21
VEGFA-225ENST00000523950 TRAV13-2A0A0B4J235 113 aa7.51□□□□□ -1.21
VEGFA-225ENST00000523950 ETDCA0A1B0GVM5 59 aa7.51□□□□□ -1.21
VEGFA-225ENST00000523950 KRTAP4-16G5E9R7 235 aaPredicted RBP7.51□□□□□ -1.21
VEGFA-225ENST00000523950 TRIAP1O43715 76 aa7.51□□□□□ -1.21
VEGFA-225ENST00000523950 PRR26Q8N8Z3 221 aa7.51□□□□□ -1.21
VEGFA-225ENST00000523950 LST1O00453 97 aa7.5□□□□□ -1.21
VEGFA-225ENST00000523950 MTURNQ8N3F0 131 aa7.5□□□□□ -1.21
VEGFA-225ENST00000523950 TRAV23DV6A0A075B6W5 121 aa7.49□□□□□ -1.21
VEGFA-225ENST00000523950 FAM229BQ4G0N7 80 aa7.49□□□□□ -1.21
VEGFA-225ENST00000523950 HIGD2AQ9BW72 106 aa7.49□□□□□ -1.21
VEGFA-225ENST00000523950 H7C2G1 150 aa7.48□□□□□ -1.21
VEGFA-225ENST00000523950 TRACP01848 142 aa7.48□□□□□ -1.21
VEGFA-225ENST00000523950 CRYGAP11844 174 aa7.48□□□□□ -1.21
VEGFA-225ENST00000523950 ZNF706Q9Y5V0 76 aaPredicted RBP7.48□□□□□ -1.21
VEGFA-225ENST00000523950 FAM240AA0A1B0GVK7 77 aa7.47□□□□□ -1.21
VEGFA-225ENST00000523950 B5MCH6 92 aa7.47□□□□□ -1.21
VEGFA-225ENST00000523950 ZNF73O43830 326 aaPredicted RBP7.46□□□□□ -1.22
VEGFA-225ENST00000523950 OR13C6PQ8NH95 151 aa7.46□□□□□ -1.22
VEGFA-225ENST00000523950 ACYP1P07311 99 aa7.45□□□□□ -1.22
VEGFA-225ENST00000523950 C21orf62-AS1Q17RA5 79 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms