RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 LORP23490 312 aaPredicted RBP14.03□□□□□ -0.16
PVT1-219ENST00000523427 KRTAP10-6P60371 365 aaPredicted RBP14.03□□□□□ -0.16
PVT1-219ENST00000523427 HSBP1O75506 76 aa14.02□□□□□ -0.17
PVT1-219ENST00000523427 J3QQQ9 107 aa14.01□□□□□ -0.17
PVT1-219ENST00000523427 NDUFC2O95298 119 aa14□□□□□ -0.17
PVT1-219ENST00000523427 EIF4EBP3O60516 100 aaPredicted RBP13.98□□□□□ -0.17
PVT1-219ENST00000523427 HINT1P49773 126 aaPredicted RBP13.98□□□□□ -0.17
PVT1-219ENST00000523427 SOSTDC1Q6X4U4 206 aa13.98□□□□□ -0.17
PVT1-219ENST00000523427 LGALS3P17931 250 aaKnown RBP13.97□□□□□ -0.17
PVT1-219ENST00000523427 APOC3P02656 99 aa13.96□□□□□ -0.17
PVT1-219ENST00000523427 PMCHL2Q9BQD1 86 aa13.95□□□□□ -0.18
PVT1-219ENST00000523427 HERVK_113P61574 105 aa13.94□□□□□ -0.18
PVT1-219ENST00000523427 ADAMTSL4-AS1Q5T5F5 129 aa13.93□□□□□ -0.18
PVT1-219ENST00000523427 SLC25A34Q6PIV7 304 aa13.93□□□□□ -0.18
PVT1-219ENST00000523427 COX6B2Q6YFQ2 88 aa13.93□□□□□ -0.18
PVT1-219ENST00000523427 LAMTOR3Q9UHA4 124 aa13.93□□□□□ -0.18
PVT1-219ENST00000523427 C5orf52A6NGY3 159 aa13.92□□□□□ -0.18
PVT1-219ENST00000523427 H7C2G1 150 aa13.92□□□□□ -0.18
PVT1-219ENST00000523427 PLNP26678 52 aa13.92□□□□□ -0.18
PVT1-219ENST00000523427 NMUP48645 174 aa13.92□□□□□ -0.18
PVT1-219ENST00000523427 OR13C6PQ8NH95 151 aa13.92□□□□□ -0.18
PVT1-219ENST00000523427 LEPROTL1O95214 131 aa13.91□□□□□ -0.18
PVT1-219ENST00000523427 SPRR1BP22528 89 aa13.9□□□□□ -0.18
PVT1-219ENST00000523427 DPM2O94777 84 aa13.89□□□□□ -0.19
PVT1-219ENST00000523427 Q1RN00 199 aa13.89□□□□□ -0.19
PVT1-219ENST00000523427 DEFB105AQ8NG35 78 aa13.88□□□□□ -0.19
PVT1-219ENST00000523427 SNAPINO95295 136 aa13.87□□□□□ -0.19
PVT1-219ENST00000523427 A0A0J9YXY3 114 aa13.86□□□□□ -0.19
PVT1-219ENST00000523427 FABP4P15090 132 aa13.86□□□□□ -0.19
PVT1-219ENST00000523427 DHRS4-AS1Q9P1J3 65 aa13.86□□□□□ -0.19
PVT1-219ENST00000523427 CBY1Q9Y3M2 126 aa13.86□□□□□ -0.19
PVT1-219ENST00000523427 TAL2Q16559 108 aa13.85□□□□□ -0.19
PVT1-219ENST00000523427 IGKCP01834 107 aa13.84□□□□□ -0.19
PVT1-219ENST00000523427 SVBPQ8N300 66 aa13.83□□□□□ -0.2
PVT1-219ENST00000523427 YPEL4Q96NS1 127 aa13.83□□□□□ -0.2
PVT1-219ENST00000523427 NDUFA5Q16718 116 aa13.82□□□□□ -0.2
PVT1-219ENST00000523427 PRO1933Q9H354 126 aa13.82□□□□□ -0.2
PVT1-219ENST00000523427 SERF1AO75920 110 aa13.81□□□□□ -0.2
PVT1-219ENST00000523427 CD164Q04900 197 aa13.8□□□□□ -0.2
PVT1-219ENST00000523427 LINC00310P59036 64 aa13.79□□□□□ -0.2
PVT1-219ENST00000523427 RPL37P61927 97 aaKnown RBP13.79□□□□□ -0.2
PVT1-219ENST00000523427 HSPB8Q9UJY1 196 aa13.79□□□□□ -0.2
PVT1-219ENST00000523427 A0A0G2JQZ4 141 aa13.78□□□□□ -0.2
PVT1-219ENST00000523427 COX7BP24311 80 aa13.78□□□□□ -0.2
PVT1-219ENST00000523427 C1orf195Q5TG92 126 aa13.78□□□□□ -0.2
PVT1-219ENST00000523427 LINC00308Q8TCZ7 52 aa13.78□□□□□ -0.2
PVT1-219ENST00000523427 SPANXCQ9NY87 97 aa13.78□□□□□ -0.2
PVT1-219ENST00000523427 TRGC2P03986 189 aa13.75□□□□□ -0.21
PVT1-219ENST00000523427 C6orf99Q4VX62 202 aa13.75□□□□□ -0.21
PVT1-219ENST00000523427 AKR1D1P51857 326 aa13.74□□□□□ -0.21
PVT1-219ENST00000523427 FLGP20930 4061 aaPredicted RBP13.73□□□□□ -0.21
PVT1-219ENST00000523427 ELOF1P60002 83 aaKnown RBP13.73□□□□□ -0.21
PVT1-219ENST00000523427 TEX49A0A1B0GTD5 131 aa13.72□□□□□ -0.21
PVT1-219ENST00000523427 E9PLD3 99 aa13.72□□□□□ -0.21
PVT1-219ENST00000523427 SPANXDQ9BXN6 97 aa13.72□□□□□ -0.21
PVT1-219ENST00000523427 LITAFQ99732 161 aa13.71□□□□□ -0.21
PVT1-219ENST00000523427 Q5XG85 94 aa13.68□□□□□ -0.22
PVT1-219ENST00000523427 SMIM29Q86T20 159 aa13.68□□□□□ -0.22
PVT1-219ENST00000523427 Q6Q795 121 aa13.67□□□□□ -0.22
PVT1-219ENST00000523427 TIMM17BO60830 172 aa13.62□□□□□ -0.23
PVT1-219ENST00000523427 LINC00518Q8N0U6 118 aa13.62□□□□□ -0.23
PVT1-219ENST00000523427 ZNF815PA8K554 130 aa13.6□□□□□ -0.23
PVT1-219ENST00000523427 TTTY13Q9BZ97 58 aa13.59□□□□□ -0.23
PVT1-219ENST00000523427 KRTAP9-7A8MTY7 169 aa13.57□□□□□ -0.24
PVT1-219ENST00000523427 TCL1BO95988 128 aa13.57□□□□□ -0.24
PVT1-219ENST00000523427 IGLV5-48A0A075B6I7 105 aa13.55□□□□□ -0.24
PVT1-219ENST00000523427 KRTAP9-1A8MXZ3 250 aaPredicted RBP13.55□□□□□ -0.24
PVT1-219ENST00000523427 A0A1B0GWB2 263 aa13.54□□□□□ -0.24
PVT1-219ENST00000523427 TRBV7-6A0A0J9YX20 115 aa13.53□□□□□ -0.24
PVT1-219ENST00000523427 A6NDN8 102 aa13.53□□□□□ -0.24
PVT1-219ENST00000523427 SYS1-DBNDD2H3BUS1 97 aa13.53□□□□□ -0.24
PVT1-219ENST00000523427 PCP2Q8IVA1 136 aa13.52□□□□□ -0.25
PVT1-219ENST00000523427 ATP11AUNQ6ZP68 121 aa13.47□□□□□ -0.25
PVT1-219ENST00000523427 OBSCN-AS1Q96MR7 158 aa13.46□□□□□ -0.25
PVT1-219ENST00000523427 SCGB1D4Q6XE38 83 aa13.45□□□□□ -0.26
PVT1-219ENST00000523427 F8WEM9 126 aa13.44□□□□□ -0.26
PVT1-219ENST00000523427 LINC01545Q5VT33 79 aa13.43□□□□□ -0.26
PVT1-219ENST00000523427 USH2AO75445 5202 aa13.4□□□□□ -0.26
PVT1-219ENST00000523427 A4D1N5 150 aa13.4□□□□□ -0.26
PVT1-219ENST00000523427 NHP2Q9NX24 153 aaKnown RBP13.4□□□□□ -0.26
PVT1-219ENST00000523427 SSPOA2VEC9 5147 aa13.39□□□□□ -0.27
PVT1-219ENST00000523427 PET117Q6UWS5 81 aa13.38□□□□□ -0.27
PVT1-219ENST00000523427 COLCA2A8K830 154 aa13.37□□□□□ -0.27
PVT1-219ENST00000523427 Q75L30 129 aa13.37□□□□□ -0.27
PVT1-219ENST00000523427 MUSTN1Q8IVN3 82 aa13.37□□□□□ -0.27
PVT1-219ENST00000523427 SMIM11BQ8TCY0 68 aa13.37□□□□□ -0.27
PVT1-219ENST00000523427 COPS9Q8WXC6 57 aa13.37□□□□□ -0.27
PVT1-219ENST00000523427 CFC1P0CG37 223 aa13.36□□□□□ -0.27
PVT1-219ENST00000523427 IFITM1P13164 125 aa13.35□□□□□ -0.27
PVT1-219ENST00000523427 KRTAP9-8Q9BYQ0 159 aa13.35□□□□□ -0.27
PVT1-219ENST00000523427 TRBV7-7A0A0K0K1E9 115 aa13.33□□□□□ -0.28
PVT1-219ENST00000523427 SLC7A5P1Q8MH63 180 aa13.33□□□□□ -0.28
PVT1-219ENST00000523427 C20orf202A1L168 122 aa13.3□□□□□ -0.28
PVT1-219ENST00000523427 C3orf79P0CE67 100 aa13.3□□□□□ -0.28
PVT1-219ENST00000523427 IGFL1Q6UW32 110 aa13.3□□□□□ -0.28
PVT1-219ENST00000523427 Q96NJ1 140 aa13.3□□□□□ -0.28
PVT1-219ENST00000523427 TRAV13-2A0A0B4J235 113 aa13.29□□□□□ -0.28
PVT1-219ENST00000523427 Q6JHZ5 121 aa13.29□□□□□ -0.28
PVT1-219ENST00000523427 CLEC2BQ92478 149 aa13.29□□□□□ -0.28
PVT1-219ENST00000523427 ANKRD39Q53RE8 183 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms