RNA–Protein interactions for RNA: ENST00000523240.5

HDAC2-214, Transcript of histone deacetylase 2, humanhuman

TSL 5

Gene HDAC2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-214ENST00000523240 SMCR5Q8TEV8 140 aa13.25□□□□□ -0.29
HDAC2-214ENST00000523240 SPRR4Q96PI1 79 aa13.25□□□□□ -0.29
HDAC2-214ENST00000523240 HIST1H2BLQ99880 126 aa13.25□□□□□ -0.29
HDAC2-214ENST00000523240 OR13C6PQ8NH95 151 aa13.24□□□□□ -0.29
HDAC2-214ENST00000523240 B5MCH6 92 aa13.23□□□□□ -0.29
HDAC2-214ENST00000523240 SNRPEP62304 92 aaKnown RBP13.22□□□□□ -0.29
HDAC2-214ENST00000523240 LINC00304Q8N9R0 145 aa13.21□□□□□ -0.29
HDAC2-214ENST00000523240 COPS9Q8WXC6 57 aa13.21□□□□□ -0.29
HDAC2-214ENST00000523240 HSBP1L1C9JCN9 74 aa13.2□□□□□ -0.3
HDAC2-214ENST00000523240 ZNF73O43830 326 aaPredicted RBP13.2□□□□□ -0.3
HDAC2-214ENST00000523240 HINT1P49773 126 aaPredicted RBP13.2□□□□□ -0.3
HDAC2-214ENST00000523240 JOSD1Q15040 202 aaPredicted RBP13.2□□□□□ -0.3
HDAC2-214ENST00000523240 PRR4Q16378 134 aa13.2□□□□□ -0.3
HDAC2-214ENST00000523240 Q6ZRX8 168 aa13.2□□□□□ -0.3
HDAC2-214ENST00000523240 SPANXDQ9BXN6 97 aa13.19□□□□□ -0.3
HDAC2-214ENST00000523240 PCP2Q8IVA1 136 aa13.18□□□□□ -0.3
HDAC2-214ENST00000523240 LINC00518Q8N0U6 118 aa13.18□□□□□ -0.3
HDAC2-214ENST00000523240 C3orf22Q8N5N4 141 aa13.18□□□□□ -0.3
HDAC2-214ENST00000523240 PPDPFQ9H3Y8 114 aa13.18□□□□□ -0.3
HDAC2-214ENST00000523240 GAGE2AQ6NT46 116 aa13.15□□□□□ -0.3
HDAC2-214ENST00000523240 IFITM1P13164 125 aa13.14□□□□□ -0.31
HDAC2-214ENST00000523240 Q6ZVH6 145 aa13.14□□□□□ -0.31
HDAC2-214ENST00000523240 Q9BRP9 147 aa13.14□□□□□ -0.31
HDAC2-214ENST00000523240 ERC2-IT1O76042 136 aa13.13□□□□□ -0.31
HDAC2-214ENST00000523240 SCGB1D1O95968 90 aa13.1□□□□□ -0.31
HDAC2-214ENST00000523240 C4orf48Q5BLP8 95 aa13.1□□□□□ -0.31
HDAC2-214ENST00000523240 LINC00483Q53H64 154 aa13.09□□□□□ -0.31
HDAC2-214ENST00000523240 LRP2P98164 4655 aa13.09□□□□□ -0.31
HDAC2-214ENST00000523240 UBR4Q5T4S7 5183 aa13.08□□□□□ -0.32
HDAC2-214ENST00000523240 MUSTN1Q8IVN3 82 aa13.08□□□□□ -0.32
HDAC2-214ENST00000523240 SPAG11AQ6PDA7 123 aa13.07□□□□□ -0.32
HDAC2-214ENST00000523240 IGLV9-49A0A0B4J1Y8 123 aa13.06□□□□□ -0.32
HDAC2-214ENST00000523240 A6NDN8 102 aa13.06□□□□□ -0.32
HDAC2-214ENST00000523240 C5orf52A6NGY3 159 aa13.06□□□□□ -0.32
HDAC2-214ENST00000523240 Q8NBF4 154 aa13.05□□□□□ -0.32
HDAC2-214ENST00000523240 COX7BP24311 80 aa13.04□□□□□ -0.32
HDAC2-214ENST00000523240 CTAG1AP78358 180 aa13.04□□□□□ -0.32
HDAC2-214ENST00000523240 C6orf99Q4VX62 202 aa13.04□□□□□ -0.32
HDAC2-214ENST00000523240 DHRS4-AS1Q9P1J3 65 aa13.04□□□□□ -0.32
HDAC2-214ENST00000523240 MOBPQ13875 183 aa13.03□□□□□ -0.32
HDAC2-214ENST00000523240 RETNLBQ9BQ08 111 aa13.03□□□□□ -0.32
HDAC2-214ENST00000523240 TRAV13-2A0A0B4J235 113 aa13□□□□□ -0.33
HDAC2-214ENST00000523240 ELOF1P60002 83 aaKnown RBP13□□□□□ -0.33
HDAC2-214ENST00000523240 ST20-AS1Q8NBB2 130 aa13□□□□□ -0.33
HDAC2-214ENST00000523240 C9orf153Q5TBE3 101 aa12.99□□□□□ -0.33
HDAC2-214ENST00000523240 SSBP3-AS1Q7Z2R9 100 aa12.97□□□□□ -0.33
HDAC2-214ENST00000523240 TRBV7-6A0A0J9YX20 115 aa12.95□□□□□ -0.34
HDAC2-214ENST00000523240 A0A1B0GWB2 263 aa12.95□□□□□ -0.34
HDAC2-214ENST00000523240 SLC25A34Q6PIV7 304 aa12.95□□□□□ -0.34
HDAC2-214ENST00000523240 SPINK1P00995 79 aa12.94□□□□□ -0.34
HDAC2-214ENST00000523240 LPAP08519 4548 aa12.94□□□□□ -0.34
HDAC2-214ENST00000523240 COX8AP10176 69 aa12.92□□□□□ -0.34
HDAC2-214ENST00000523240 TAL2Q16559 108 aa12.91□□□□□ -0.34
HDAC2-214ENST00000523240 HIST1H4GQ99525 98 aa12.91□□□□□ -0.34
HDAC2-214ENST00000523240 IGLV7-46A0A075B6I9 117 aa12.9□□□□□ -0.34
HDAC2-214ENST00000523240 A4D1N5 150 aa12.9□□□□□ -0.34
HDAC2-214ENST00000523240 LAMTOR3Q9UHA4 124 aa12.9□□□□□ -0.34
HDAC2-214ENST00000523240 DEFB105AQ8NG35 78 aa12.89□□□□□ -0.35
HDAC2-214ENST00000523240 SMIM11BQ8TCY0 68 aa12.89□□□□□ -0.35
HDAC2-214ENST00000523240 PAM16Q9Y3D7 125 aa12.89□□□□□ -0.35
HDAC2-214ENST00000523240 SPRR1BP22528 89 aa12.88□□□□□ -0.35
HDAC2-214ENST00000523240 VAMP8Q9BV40 100 aa12.88□□□□□ -0.35
HDAC2-214ENST00000523240 SPATA45Q537H7 98 aa12.87□□□□□ -0.35
HDAC2-214ENST00000523240 NHP2Q9NX24 153 aaKnown RBP12.87□□□□□ -0.35
HDAC2-214ENST00000523240 DLEU1O43261 78 aa12.86□□□□□ -0.35
HDAC2-214ENST00000523240 VAMP3Q15836 100 aa12.86□□□□□ -0.35
HDAC2-214ENST00000523240 C14orf144Q96I85 54 aa12.85□□□□□ -0.35
HDAC2-214ENST00000523240 TEX49A0A1B0GTD5 131 aa12.84□□□□□ -0.35
HDAC2-214ENST00000523240 SLC25A20O43772 301 aa12.84□□□□□ -0.35
HDAC2-214ENST00000523240 FP248Q71RG6 208 aaPredicted RBP12.84□□□□□ -0.35
HDAC2-214ENST00000523240 RPS29P62273 56 aaKnown RBP12.83□□□□□ -0.36
HDAC2-214ENST00000523240 Q1RN00 199 aa12.83□□□□□ -0.36
HDAC2-214ENST00000523240 C12orf57Q99622 126 aa12.83□□□□□ -0.36
HDAC2-214ENST00000523240 CDIP1Q9H305 208 aa12.83□□□□□ -0.36
HDAC2-214ENST00000523240 TPRXLQ17RH7 258 aa12.81□□□□□ -0.36
HDAC2-214ENST00000523240 HIGD1BQ9P298 99 aa12.77□□□□□ -0.37
HDAC2-214ENST00000523240 Q8N377 158 aa12.76□□□□□ -0.37
HDAC2-214ENST00000523240 TMA7Q9Y2S6 64 aaKnown RBP12.76□□□□□ -0.37
HDAC2-214ENST00000523240 IGLV5-48A0A075B6I7 105 aa12.75□□□□□ -0.37
HDAC2-214ENST00000523240 HRCT1Q6UXD1 115 aa12.75□□□□□ -0.37
HDAC2-214ENST00000523240 RAB37Q96AX2 223 aa12.74□□□□□ -0.37
HDAC2-214ENST00000523240 PRO1933Q9H354 126 aa12.74□□□□□ -0.37
HDAC2-214ENST00000523240 RNF213Q63HN8 5207 aa12.74□□□□□ -0.37
HDAC2-214ENST00000523240 LINC00575Q6W349 94 aa12.73□□□□□ -0.37
HDAC2-214ENST00000523240 LIMD2Q9BT23 127 aa12.73□□□□□ -0.37
HDAC2-214ENST00000523240 H7C2G1 150 aa12.72□□□□□ -0.37
HDAC2-214ENST00000523240 LINC01547P58512 204 aaPredicted RBP12.72□□□□□ -0.37
HDAC2-214ENST00000523240 BVES-AS1Q5T3Y7 98 aa12.72□□□□□ -0.37
HDAC2-214ENST00000523240 hADV29S1A0JD25 119 aa12.71□□□□□ -0.37
HDAC2-214ENST00000523240 C2orf91Q6ZV80 131 aa12.7□□□□□ -0.38
HDAC2-214ENST00000523240 F8WEM9 126 aa12.69□□□□□ -0.38
HDAC2-214ENST00000523240 SMIM29Q86T20 159 aa12.69□□□□□ -0.38
HDAC2-214ENST00000523240 CFC1BP0CG36 223 aa12.68□□□□□ -0.38
HDAC2-214ENST00000523240 CFC1P0CG37 223 aa12.68□□□□□ -0.38
HDAC2-214ENST00000523240 Q6ZQY7 126 aa12.68□□□□□ -0.38
HDAC2-214ENST00000523240 PYY3Q5JQD4 70 aa12.67□□□□□ -0.38
HDAC2-214ENST00000523240 TMEM238LA0A1B0GVL6 79 aa12.66□□□□□ -0.38
HDAC2-214ENST00000523240 A6NJY4 79 aa12.66□□□□□ -0.38
HDAC2-214ENST00000523240 A0A0B4J2C4 111 aa12.65□□□□□ -0.38
HDAC2-214ENST00000523240 CD164Q04900 197 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms