RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 NHP2Q9NX24 153 aaKnown RBP4.13□□□□□ -1.75
HMBOX1-208ENST00000521516 B5MCH6 92 aa4.12□□□□□ -1.75
HMBOX1-208ENST00000521516 H7C423 109 aa4.12□□□□□ -1.75
HMBOX1-208ENST00000521516 BCE1O60756 84 aa4.12□□□□□ -1.75
HMBOX1-208ENST00000521516 SMCPP49901 116 aaPredicted RBP4.12□□□□□ -1.75
HMBOX1-208ENST00000521516 NRACQ8N912 160 aa4.12□□□□□ -1.75
HMBOX1-208ENST00000521516 A0A1B0GWB2 263 aa4.11□□□□□ -1.75
HMBOX1-208ENST00000521516 TAL2Q16559 108 aa4.11□□□□□ -1.75
HMBOX1-208ENST00000521516 SUMO4Q6EEV6 95 aa4.11□□□□□ -1.75
HMBOX1-208ENST00000521516 ORMDL2Q53FV1 153 aa4.11□□□□□ -1.75
HMBOX1-208ENST00000521516 SMIM20Q8N5G0 67 aa4.11□□□□□ -1.75
HMBOX1-208ENST00000521516 UBE2D4Q9Y2X8 147 aa4.11□□□□□ -1.75
HMBOX1-208ENST00000521516 LINC01549A6NIU2 74 aa4.1□□□□□ -1.75
HMBOX1-208ENST00000521516 H3BS24 57 aa4.1□□□□□ -1.75
HMBOX1-208ENST00000521516 COX7A2LO14548 114 aa4.1□□□□□ -1.75
HMBOX1-208ENST00000521516 GAGE2EQ4V326 116 aa4.1□□□□□ -1.75
HMBOX1-208ENST00000521516 KRTAP13-1Q8IUC0 172 aa4.1□□□□□ -1.75
HMBOX1-208ENST00000521516 SMIM2Q9BVW6 85 aa4.1□□□□□ -1.75
HMBOX1-208ENST00000521516 TTTY13Q9BZ97 58 aa4.1□□□□□ -1.75
HMBOX1-208ENST00000521516 GAGE2DQ9UEU5 116 aa4.1□□□□□ -1.75
HMBOX1-208ENST00000521516 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
HMBOX1-208ENST00000521516 SUMO2P61956 95 aaKnown RBP4.1□□□□□ -1.75
HMBOX1-208ENST00000521516 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.09□□□□□ -1.75
HMBOX1-208ENST00000521516 IGKV2-29A2NJV5 120 aaPredicted RBP4.09□□□□□ -1.75
HMBOX1-208ENST00000521516 MGPP08493 103 aa4.09□□□□□ -1.75
HMBOX1-208ENST00000521516 SPAG11BQ08648 103 aa4.09□□□□□ -1.75
HMBOX1-208ENST00000521516 PPDPFLQ8WWR9 84 aa4.09□□□□□ -1.75
HMBOX1-208ENST00000521516 CSDC2Q9Y534 153 aaKnown RBP4.09□□□□□ -1.75
HMBOX1-208ENST00000521516 TRAV12-1A0A0B4J245 112 aa4.09□□□□□ -1.76
HMBOX1-208ENST00000521516 DPM2O94777 84 aa4.09□□□□□ -1.76
HMBOX1-208ENST00000521516 IGKCP01834 107 aa4.09□□□□□ -1.76
HMBOX1-208ENST00000521516 C9orf129Q5T035 196 aaKnown RBP4.09□□□□□ -1.76
HMBOX1-208ENST00000521516 C10orf25Q5T742 122 aa4.09□□□□□ -1.76
HMBOX1-208ENST00000521516 TEN1Q86WV5 123 aa4.09□□□□□ -1.76
HMBOX1-208ENST00000521516 C3orf22Q8N5N4 141 aa4.09□□□□□ -1.76
HMBOX1-208ENST00000521516 GPR98Q8WXG9 6306 aa4.08□□□□□ -1.76
HMBOX1-208ENST00000521516 CCDC179H3BU77 68 aa4.08□□□□□ -1.76
HMBOX1-208ENST00000521516 VCYO14598 125 aa4.08□□□□□ -1.76
HMBOX1-208ENST00000521516 TOMM6Q96B49 74 aa4.08□□□□□ -1.76
HMBOX1-208ENST00000521516 C6orf48Q9UBA6 75 aa4.08□□□□□ -1.76
HMBOX1-208ENST00000521516 NDUFV3P56181 108 aaKnown RBP4.07□□□□□ -1.76
HMBOX1-208ENST00000521516 SCGB3A1Q96QR1 104 aa4.07□□□□□ -1.76
HMBOX1-208ENST00000521516 KRTAP9-3Q9BYQ3 159 aa4.07□□□□□ -1.76
HMBOX1-208ENST00000521516 TRBV6-5A0A0K0K1A5 114 aa4.07□□□□□ -1.76
HMBOX1-208ENST00000521516 PLNP26678 52 aa4.07□□□□□ -1.76
HMBOX1-208ENST00000521516 ZC2HC1BQ5TFG8 222 aa4.07□□□□□ -1.76
HMBOX1-208ENST00000521516 Q6Q795 121 aa4.07□□□□□ -1.76
HMBOX1-208ENST00000521516 RPL39LQ96EH5 51 aaKnown RBP4.07□□□□□ -1.76
HMBOX1-208ENST00000521516 SPANXA1Q9NS26 97 aa4.07□□□□□ -1.76
HMBOX1-208ENST00000521516 NDUFA12Q9UI09 145 aa4.07□□□□□ -1.76
HMBOX1-208ENST00000521516 C22orf24Q9Y442 160 aa4.07□□□□□ -1.76
HMBOX1-208ENST00000521516 NDUFA1O15239 70 aa4.06□□□□□ -1.76
HMBOX1-208ENST00000521516 POLR2KP53803 58 aaKnown RBP4.06□□□□□ -1.76
HMBOX1-208ENST00000521516 TMEM101Q96IK0 257 aa4.06□□□□□ -1.76
HMBOX1-208ENST00000521516 CDC42SE2Q9NRR3 84 aa4.06□□□□□ -1.76
HMBOX1-208ENST00000521516 VPREB1P12018 145 aa4.06□□□□□ -1.76
HMBOX1-208ENST00000521516 C2orf66Q6UXQ4 117 aa4.06□□□□□ -1.76
HMBOX1-208ENST00000521516 UNQ6190/PRO20217Q6UXQ8 127 aa4.06□□□□□ -1.76
HMBOX1-208ENST00000521516 TMEM141Q96I45 108 aa4.06□□□□□ -1.76
HMBOX1-208ENST00000521516 F8VRH5 84 aa4.05□□□□□ -1.76
HMBOX1-208ENST00000521516 MT2AP02795 61 aa4.05□□□□□ -1.76
HMBOX1-208ENST00000521516 PAPPA-AS1Q5QFB9 102 aa4.05□□□□□ -1.76
HMBOX1-208ENST00000521516 HIST1H4GQ99525 98 aa4.05□□□□□ -1.76
HMBOX1-208ENST00000521516 KMT2DO14686 5537 aa4.05□□□□□ -1.76
HMBOX1-208ENST00000521516 SPINK1P00995 79 aa4.05□□□□□ -1.76
HMBOX1-208ENST00000521516 C5orf38Q86SI9 138 aa4.05□□□□□ -1.76
HMBOX1-208ENST00000521516 TRBV20-1A0A075B6N2 111 aa4.04□□□□□ -1.76
HMBOX1-208ENST00000521516 TRBV27A0A0K0K1C4 114 aa4.04□□□□□ -1.76
HMBOX1-208ENST00000521516 MYMXA0A1B0GTQ4 84 aa4.04□□□□□ -1.76
HMBOX1-208ENST00000521516 SDHAF1A6NFY7 115 aa4.04□□□□□ -1.76
HMBOX1-208ENST00000521516 NDUFC2-KCTD14E9PQ53 114 aa4.04□□□□□ -1.76
HMBOX1-208ENST00000521516 IFITM1P13164 125 aa4.04□□□□□ -1.76
HMBOX1-208ENST00000521516 TIMM17AQ99595 171 aa4.04□□□□□ -1.76
HMBOX1-208ENST00000521516 MDN1Q9NU22 5596 aa4.04□□□□□ -1.76
HMBOX1-208ENST00000521516 I3L3M4 83 aa4.03□□□□□ -1.76
HMBOX1-208ENST00000521516 ANKRD29Q8N6D5 301 aa4.03□□□□□ -1.76
HMBOX1-208ENST00000521516 IGIPA6NJ69 53 aa4.03□□□□□ -1.76
HMBOX1-208ENST00000521516 TCL1BO95988 128 aa4.03□□□□□ -1.76
HMBOX1-208ENST00000521516 PSMB2P49721 201 aa4.03□□□□□ -1.76
HMBOX1-208ENST00000521516 PMVKQ15126 192 aa4.03□□□□□ -1.76
HMBOX1-208ENST00000521516 LYRM7Q5U5X0 104 aa4.03□□□□□ -1.76
HMBOX1-208ENST00000521516 SNCGO76070 127 aa4.02□□□□□ -1.77
HMBOX1-208ENST00000521516 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
HMBOX1-208ENST00000521516 HERVK_113P61574 105 aa4.02□□□□□ -1.77
HMBOX1-208ENST00000521516 C6orf226Q5I0X4 101 aa4.02□□□□□ -1.77
HMBOX1-208ENST00000521516 Q8N377 158 aa4.02□□□□□ -1.77
HMBOX1-208ENST00000521516 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
HMBOX1-208ENST00000521516 TMEM126AQ9H061 195 aa4.02□□□□□ -1.77
HMBOX1-208ENST00000521516 MT1FP04733 61 aa4.02□□□□□ -1.77
HMBOX1-208ENST00000521516 UBE2AP49459 152 aa4.02□□□□□ -1.77
HMBOX1-208ENST00000521516 MRPL55Q7Z7F7 128 aaKnown RBP4.02□□□□□ -1.77
HMBOX1-208ENST00000521516 LOC107984156A0A0G2JMH3 177 aa4.01□□□□□ -1.77
HMBOX1-208ENST00000521516 PRYO14603 147 aa4.01□□□□□ -1.77
HMBOX1-208ENST00000521516 RPS29P62273 56 aaKnown RBP4.01□□□□□ -1.77
HMBOX1-208ENST00000521516 MEIG1Q5JSS6 88 aa4.01□□□□□ -1.77
HMBOX1-208ENST00000521516 ARL17AQ8IVW1 177 aa4.01□□□□□ -1.77
HMBOX1-208ENST00000521516 Q8NBF4 154 aa4.01□□□□□ -1.77
HMBOX1-208ENST00000521516 TRBV30A0A0K0K1B3 111 aa4.01□□□□□ -1.77
HMBOX1-208ENST00000521516 C11orf86A6NJI1 115 aa4□□□□□ -1.77
HMBOX1-208ENST00000521516 SLC25A20O43772 301 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms