RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 MYCBP2O75592 4640 aa5.83□□□□□ -1.48
HDAC3-215ENST00000519474 IGIPA6NJ69 53 aa5.82□□□□□ -1.48
HDAC3-215ENST00000519474 C8orf87E5RJ46 101 aa5.82□□□□□ -1.48
HDAC3-215ENST00000519474 MT1HL1P0DM35 61 aa5.82□□□□□ -1.48
HDAC3-215ENST00000519474 SPAG11BQ08648 103 aa5.82□□□□□ -1.48
HDAC3-215ENST00000519474 TMEM170BQ5T4T1 132 aa5.82□□□□□ -1.48
HDAC3-215ENST00000519474 C10orf25Q5T742 122 aa5.82□□□□□ -1.48
HDAC3-215ENST00000519474 C2orf66Q6UXQ4 117 aa5.82□□□□□ -1.48
HDAC3-215ENST00000519474 UNQ6190/PRO20217Q6UXQ8 127 aa5.82□□□□□ -1.48
HDAC3-215ENST00000519474 LINC00173Q6ZV60 143 aa5.82□□□□□ -1.48
HDAC3-215ENST00000519474 KTN1-AS1Q86SY8 53 aa5.82□□□□□ -1.48
HDAC3-215ENST00000519474 SERP2Q8N6R1 65 aa5.82□□□□□ -1.48
HDAC3-215ENST00000519474 C7orf33Q8WU49 177 aa5.82□□□□□ -1.48
HDAC3-215ENST00000519474 TMEM141Q96I45 108 aa5.82□□□□□ -1.48
HDAC3-215ENST00000519474 DSCR8Q96T75 97 aa5.82□□□□□ -1.48
HDAC3-215ENST00000519474 AMELXQ99217 191 aa5.82□□□□□ -1.48
HDAC3-215ENST00000519474 HERC1Q15751 4861 aa5.82□□□□□ -1.48
HDAC3-215ENST00000519474 LRP1Q07954 4544 aaKnown RBP5.81□□□□□ -1.48
HDAC3-215ENST00000519474 A0A087WZ39 114 aa5.81□□□□□ -1.48
HDAC3-215ENST00000519474 K7EMI3 77 aa5.81□□□□□ -1.48
HDAC3-215ENST00000519474 UBE2D1P51668 147 aa5.81□□□□□ -1.48
HDAC3-215ENST00000519474 NXT2Q9NPJ8 142 aaKnown RBP5.81□□□□□ -1.48
HDAC3-215ENST00000519474 MRPL35Q9NZE8 188 aaKnown RBP5.81□□□□□ -1.48
HDAC3-215ENST00000519474 DMBT1Q9UGM3 2413 aaPredicted RBP5.8□□□□□ -1.48
HDAC3-215ENST00000519474 hADV29S1A0JD25 119 aa5.8□□□□□ -1.48
HDAC3-215ENST00000519474 LEPROTL1O95214 131 aa5.8□□□□□ -1.48
HDAC3-215ENST00000519474 ORMDL2Q53FV1 153 aa5.8□□□□□ -1.48
HDAC3-215ENST00000519474 C9orf116Q5BN46 136 aaPredicted RBP5.8□□□□□ -1.48
HDAC3-215ENST00000519474 LINC00643Q86TS7 51 aa5.8□□□□□ -1.48
HDAC3-215ENST00000519474 GHRHP01286 108 aa5.79□□□□□ -1.48
HDAC3-215ENST00000519474 PRR3P79522 188 aaKnown RBP5.79□□□□□ -1.48
HDAC3-215ENST00000519474 FAM19A3Q7Z5A8 133 aa5.79□□□□□ -1.48
HDAC3-215ENST00000519474 TOMM6Q96B49 74 aa5.79□□□□□ -1.48
HDAC3-215ENST00000519474 C6orf48Q9UBA6 75 aa5.79□□□□□ -1.48
HDAC3-215ENST00000519474 A0A0A0MQY5 61 aa5.78□□□□□ -1.48
HDAC3-215ENST00000519474 LINC01546A6NGU7 62 aa5.78□□□□□ -1.48
HDAC3-215ENST00000519474 NDUFA1O15239 70 aa5.78□□□□□ -1.48
HDAC3-215ENST00000519474 TLX1NBP0CAT3 122 aa5.78□□□□□ -1.48
HDAC3-215ENST00000519474 LGALS3P17931 250 aaKnown RBP5.78□□□□□ -1.48
HDAC3-215ENST00000519474 Q6ZRP5 223 aa5.78□□□□□ -1.48
HDAC3-215ENST00000519474 FXYD2P54710 66 aa5.77□□□□□ -1.49
HDAC3-215ENST00000519474 C2orf82Q6UX34 121 aa5.77□□□□□ -1.49
HDAC3-215ENST00000519474 PHF5AQ7RTV0 110 aaKnown RBP5.77□□□□□ -1.49
HDAC3-215ENST00000519474 FAM19A2Q8N3H0 131 aa5.77□□□□□ -1.49
HDAC3-215ENST00000519474 MYMXA0A1B0GTQ4 84 aa5.76□□□□□ -1.49
HDAC3-215ENST00000519474 BCE1O60756 84 aa5.76□□□□□ -1.49
HDAC3-215ENST00000519474 SPINK6Q6UWN8 80 aa5.76□□□□□ -1.49
HDAC3-215ENST00000519474 KRTAP7-1Q8IUC3 87 aa5.76□□□□□ -1.49
HDAC3-215ENST00000519474 TIMM17AQ99595 171 aa5.76□□□□□ -1.49
HDAC3-215ENST00000519474 NHP2Q9NX24 153 aaKnown RBP5.76□□□□□ -1.49
HDAC3-215ENST00000519474 FAT3Q8TDW7 4589 aa5.75□□□□□ -1.49
HDAC3-215ENST00000519474 TRBV30A0A0K0K1B3 111 aa5.75□□□□□ -1.49
HDAC3-215ENST00000519474 FAM168BA1KXE4 195 aa5.75□□□□□ -1.49
HDAC3-215ENST00000519474 KRTAP10-8P60410 259 aa5.75□□□□□ -1.49
HDAC3-215ENST00000519474 FP248Q71RG6 208 aaPredicted RBP5.75□□□□□ -1.49
HDAC3-215ENST00000519474 KRTAP11-1Q8IUC1 163 aa5.75□□□□□ -1.49
HDAC3-215ENST00000519474 SCGB3A1Q96QR1 104 aa5.75□□□□□ -1.49
HDAC3-215ENST00000519474 CDKN2A-AS1Q9UH64 79 aa5.75□□□□□ -1.49
HDAC3-215ENST00000519474 PSORS1C2Q9UIG4 136 aa5.75□□□□□ -1.49
HDAC3-215ENST00000519474 PAPPA-AS1Q5QFB9 102 aa5.74□□□□□ -1.49
HDAC3-215ENST00000519474 IFI27L1Q96BM0 104 aa5.74□□□□□ -1.49
HDAC3-215ENST00000519474 C9orf129Q5T035 196 aaKnown RBP5.73□□□□□ -1.49
HDAC3-215ENST00000519474 URB1-AS1Q96HZ7 61 aa5.73□□□□□ -1.49
HDAC3-215ENST00000519474 TOMM7Q9P0U1 55 aa5.73□□□□□ -1.49
HDAC3-215ENST00000519474 LINC01549A6NIU2 74 aa5.72□□□□□ -1.49
HDAC3-215ENST00000519474 M0R378 163 aa5.72□□□□□ -1.49
HDAC3-215ENST00000519474 SLC25A20O43772 301 aa5.72□□□□□ -1.49
HDAC3-215ENST00000519474 HBDP02042 147 aa5.72□□□□□ -1.49
HDAC3-215ENST00000519474 HERVK_113P61574 105 aa5.72□□□□□ -1.49
HDAC3-215ENST00000519474 Q8IZM0 81 aa5.72□□□□□ -1.49
HDAC3-215ENST00000519474 PKHD1L1Q86WI1 4243 aa5.72□□□□□ -1.49
HDAC3-215ENST00000519474 A0A096LNJ9 63 aa5.71□□□□□ -1.5
HDAC3-215ENST00000519474 NDUFC1O43677 76 aa5.71□□□□□ -1.5
HDAC3-215ENST00000519474 PRSS2P07478 247 aa5.71□□□□□ -1.5
HDAC3-215ENST00000519474 C1orf137Q5JT78 98 aa5.71□□□□□ -1.5
HDAC3-215ENST00000519474 IGLV5-45A0A087WSX0 123 aa5.7□□□□□ -1.5
HDAC3-215ENST00000519474 PSMB2P49721 201 aa5.7□□□□□ -1.5
HDAC3-215ENST00000519474 REG3GQ6UW15 175 aa5.7□□□□□ -1.5
HDAC3-215ENST00000519474 LCA10Q71F78 164 aa5.7□□□□□ -1.5
HDAC3-215ENST00000519474 TP73-AS1Q9UF72 201 aa5.7□□□□□ -1.5
HDAC3-215ENST00000519474 PLA2G2DQ9UNK4 145 aa5.7□□□□□ -1.5
HDAC3-215ENST00000519474 SMIM1B2RUZ4 78 aa5.69□□□□□ -1.5
HDAC3-215ENST00000519474 IGLV7-43P04211 117 aa5.69□□□□□ -1.5
HDAC3-215ENST00000519474 F8VRH5 84 aa5.68□□□□□ -1.5
HDAC3-215ENST00000519474 ZNF73O43830 326 aaPredicted RBP5.68□□□□□ -1.5
HDAC3-215ENST00000519474 Q6ZVQ6 151 aa5.68□□□□□ -1.5
HDAC3-215ENST00000519474 XAGE1AQ9HD64 81 aa5.68□□□□□ -1.5
HDAC3-215ENST00000519474 C22orf24Q9Y442 160 aa5.68□□□□□ -1.5
HDAC3-215ENST00000519474 TRBV10-2A0A0K0K1G8 114 aa5.67□□□□□ -1.5
HDAC3-215ENST00000519474 TIMM17BO60830 172 aa5.67□□□□□ -1.5
HDAC3-215ENST00000519474 COX7B2Q8TF08 81 aa5.67□□□□□ -1.5
HDAC3-215ENST00000519474 K7ERJ3 54 aa5.66□□□□□ -1.5
HDAC3-215ENST00000519474 PRYO14603 147 aa5.66□□□□□ -1.5
HDAC3-215ENST00000519474 A0A0B4J2C4 111 aa5.65□□□□□ -1.5
HDAC3-215ENST00000519474 CCKP06307 115 aa5.65□□□□□ -1.5
HDAC3-215ENST00000519474 UBE2BP63146 152 aa5.65□□□□□ -1.5
HDAC3-215ENST00000519474 DIRC1Q969H9 104 aa5.65□□□□□ -1.5
HDAC3-215ENST00000519474 IGLV5-39A0A0G2JS06 123 aa5.64□□□□□ -1.51
HDAC3-215ENST00000519474 LST1O00453 97 aa5.64□□□□□ -1.51
HDAC3-215ENST00000519474 ZNF22P17026 224 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms