RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 IGLV6-57P01721 117 aa10.98□□□□□ -0.65
FAM49B-208ENST00000518344 SMCR5Q8TEV8 140 aa10.98□□□□□ -0.65
FAM49B-208ENST00000518344 B5MCH6 92 aa10.97□□□□□ -0.65
FAM49B-208ENST00000518344 SPRR4Q96PI1 79 aa10.97□□□□□ -0.65
FAM49B-208ENST00000518344 SPANXCQ9NY87 97 aa10.97□□□□□ -0.65
FAM49B-208ENST00000518344 UBR4Q5T4S7 5183 aa10.97□□□□□ -0.65
FAM49B-208ENST00000518344 ZNF706Q9Y5V0 76 aaPredicted RBP10.96□□□□□ -0.65
FAM49B-208ENST00000518344 TRAV23DV6A0A075B6W5 121 aa10.95□□□□□ -0.66
FAM49B-208ENST00000518344 OR13C6PQ8NH95 151 aa10.95□□□□□ -0.66
FAM49B-208ENST00000518344 SNRPEP62304 92 aaKnown RBP10.94□□□□□ -0.66
FAM49B-208ENST00000518344 PCP2Q8IVA1 136 aa10.94□□□□□ -0.66
FAM49B-208ENST00000518344 C3orf22Q8N5N4 141 aa10.92□□□□□ -0.66
FAM49B-208ENST00000518344 SPANXDQ9BXN6 97 aa10.92□□□□□ -0.66
FAM49B-208ENST00000518344 PPDPFQ9H3Y8 114 aa10.92□□□□□ -0.66
FAM49B-208ENST00000518344 ZNF73O43830 326 aaPredicted RBP10.91□□□□□ -0.66
FAM49B-208ENST00000518344 Q6ZRX8 168 aa10.91□□□□□ -0.66
FAM49B-208ENST00000518344 ERC2-IT1O76042 136 aa10.9□□□□□ -0.66
FAM49B-208ENST00000518344 PRR4Q16378 134 aa10.9□□□□□ -0.66
FAM49B-208ENST00000518344 LINC00304Q8N9R0 145 aa10.9□□□□□ -0.66
FAM49B-208ENST00000518344 Q9BRP9 147 aa10.9□□□□□ -0.66
FAM49B-208ENST00000518344 CBY1Q9Y3M2 126 aa10.9□□□□□ -0.66
FAM49B-208ENST00000518344 LRP2P98164 4655 aa10.9□□□□□ -0.66
FAM49B-208ENST00000518344 HSBP1L1C9JCN9 74 aa10.89□□□□□ -0.67
FAM49B-208ENST00000518344 HINT1P49773 126 aaPredicted RBP10.89□□□□□ -0.67
FAM49B-208ENST00000518344 GAGE2AQ6NT46 116 aa10.89□□□□□ -0.67
FAM49B-208ENST00000518344 JOSD1Q15040 202 aaPredicted RBP10.88□□□□□ -0.67
FAM49B-208ENST00000518344 LINC00518Q8N0U6 118 aa10.88□□□□□ -0.67
FAM49B-208ENST00000518344 COPS9Q8WXC6 57 aa10.88□□□□□ -0.67
FAM49B-208ENST00000518344 SCGB1D1O95968 90 aa10.87□□□□□ -0.67
FAM49B-208ENST00000518344 IFITM1P13164 125 aa10.87□□□□□ -0.67
FAM49B-208ENST00000518344 Q6ZVH6 145 aa10.86□□□□□ -0.67
FAM49B-208ENST00000518344 MUSTN1Q8IVN3 82 aa10.86□□□□□ -0.67
FAM49B-208ENST00000518344 C5orf52A6NGY3 159 aa10.85□□□□□ -0.67
FAM49B-208ENST00000518344 LPAP08519 4548 aa10.85□□□□□ -0.67
FAM49B-208ENST00000518344 LINC00483Q53H64 154 aa10.84□□□□□ -0.67
FAM49B-208ENST00000518344 A6NDN8 102 aa10.82□□□□□ -0.68
FAM49B-208ENST00000518344 SMCPP49901 116 aaPredicted RBP10.82□□□□□ -0.68
FAM49B-208ENST00000518344 C4orf48Q5BLP8 95 aa10.8□□□□□ -0.68
FAM49B-208ENST00000518344 IGLV9-49A0A0B4J1Y8 123 aa10.79□□□□□ -0.68
FAM49B-208ENST00000518344 C6orf99Q4VX62 202 aa10.79□□□□□ -0.68
FAM49B-208ENST00000518344 ST20-AS1Q8NBB2 130 aa10.79□□□□□ -0.68
FAM49B-208ENST00000518344 Q8NBF4 154 aa10.79□□□□□ -0.68
FAM49B-208ENST00000518344 RETNLBQ9BQ08 111 aa10.79□□□□□ -0.68
FAM49B-208ENST00000518344 COX7BP24311 80 aa10.78□□□□□ -0.68
FAM49B-208ENST00000518344 SPAG11AQ6PDA7 123 aa10.78□□□□□ -0.68
FAM49B-208ENST00000518344 DHRS4-AS1Q9P1J3 65 aa10.77□□□□□ -0.69
FAM49B-208ENST00000518344 MOBPQ13875 183 aa10.76□□□□□ -0.69
FAM49B-208ENST00000518344 ELOF1P60002 83 aaKnown RBP10.75□□□□□ -0.69
FAM49B-208ENST00000518344 CTAG1AP78358 180 aa10.75□□□□□ -0.69
FAM49B-208ENST00000518344 TRAV13-2A0A0B4J235 113 aa10.74□□□□□ -0.69
FAM49B-208ENST00000518344 C9orf153Q5TBE3 101 aa10.72□□□□□ -0.69
FAM49B-208ENST00000518344 SSBP3-AS1Q7Z2R9 100 aa10.72□□□□□ -0.69
FAM49B-208ENST00000518344 TRBV7-6A0A0J9YX20 115 aa10.71□□□□□ -0.69
FAM49B-208ENST00000518344 COX8AP10176 69 aa10.71□□□□□ -0.69
FAM49B-208ENST00000518344 A0A1B0GWB2 263 aa10.7□□□□□ -0.7
FAM49B-208ENST00000518344 A4D1N5 150 aa10.7□□□□□ -0.7
FAM49B-208ENST00000518344 DEFB105AQ8NG35 78 aa10.69□□□□□ -0.7
FAM49B-208ENST00000518344 SMIM11BQ8TCY0 68 aa10.69□□□□□ -0.7
FAM49B-208ENST00000518344 HIST1H4GQ99525 98 aa10.69□□□□□ -0.7
FAM49B-208ENST00000518344 SPINK1P00995 79 aa10.68□□□□□ -0.7
FAM49B-208ENST00000518344 TAL2Q16559 108 aa10.68□□□□□ -0.7
FAM49B-208ENST00000518344 PAM16Q9Y3D7 125 aa10.68□□□□□ -0.7
FAM49B-208ENST00000518344 SPRR1BP22528 89 aa10.67□□□□□ -0.7
FAM49B-208ENST00000518344 SPATA45Q537H7 98 aa10.67□□□□□ -0.7
FAM49B-208ENST00000518344 C14orf144Q96I85 54 aa10.67□□□□□ -0.7
FAM49B-208ENST00000518344 IGLV7-46A0A075B6I9 117 aa10.66□□□□□ -0.7
FAM49B-208ENST00000518344 SLC25A34Q6PIV7 304 aa10.66□□□□□ -0.7
FAM49B-208ENST00000518344 DLEU1O43261 78 aa10.65□□□□□ -0.7
FAM49B-208ENST00000518344 VAMP8Q9BV40 100 aa10.65□□□□□ -0.7
FAM49B-208ENST00000518344 LAMTOR3Q9UHA4 124 aa10.65□□□□□ -0.7
FAM49B-208ENST00000518344 RNF213Q63HN8 5207 aa10.65□□□□□ -0.7
FAM49B-208ENST00000518344 C12orf57Q99622 126 aa10.64□□□□□ -0.71
FAM49B-208ENST00000518344 TEX49A0A1B0GTD5 131 aa10.62□□□□□ -0.71
FAM49B-208ENST00000518344 VAMP3Q15836 100 aa10.62□□□□□ -0.71
FAM49B-208ENST00000518344 Q1RN00 199 aa10.61□□□□□ -0.71
FAM49B-208ENST00000518344 NHP2Q9NX24 153 aaKnown RBP10.61□□□□□ -0.71
FAM49B-208ENST00000518344 TMA7Q9Y2S6 64 aaKnown RBP10.59□□□□□ -0.71
FAM49B-208ENST00000518344 SLC25A20O43772 301 aa10.58□□□□□ -0.72
FAM49B-208ENST00000518344 RPS29P62273 56 aaKnown RBP10.58□□□□□ -0.72
FAM49B-208ENST00000518344 TPRXLQ17RH7 258 aa10.58□□□□□ -0.72
FAM49B-208ENST00000518344 FP248Q71RG6 208 aaPredicted RBP10.58□□□□□ -0.72
FAM49B-208ENST00000518344 CDIP1Q9H305 208 aa10.58□□□□□ -0.72
FAM49B-208ENST00000518344 HRCT1Q6UXD1 115 aa10.57□□□□□ -0.72
FAM49B-208ENST00000518344 Q8N377 158 aa10.57□□□□□ -0.72
FAM49B-208ENST00000518344 HIGD1BQ9P298 99 aa10.57□□□□□ -0.72
FAM49B-208ENST00000518344 LINC01547P58512 204 aaPredicted RBP10.56□□□□□ -0.72
FAM49B-208ENST00000518344 IGLV5-48A0A075B6I7 105 aa10.55□□□□□ -0.72
FAM49B-208ENST00000518344 LINC00575Q6W349 94 aa10.55□□□□□ -0.72
FAM49B-208ENST00000518344 SMIM29Q86T20 159 aa10.55□□□□□ -0.72
FAM49B-208ENST00000518344 LCE2AQ5TA79 106 aaPredicted RBP10.54□□□□□ -0.72
FAM49B-208ENST00000518344 C2orf91Q6ZV80 131 aa10.54□□□□□ -0.72
FAM49B-208ENST00000518344 H7C2G1 150 aa10.53□□□□□ -0.72
FAM49B-208ENST00000518344 PYY3Q5JQD4 70 aa10.53□□□□□ -0.72
FAM49B-208ENST00000518344 RAB37Q96AX2 223 aa10.53□□□□□ -0.72
FAM49B-208ENST00000518344 CFC1BP0CG36 223 aa10.52□□□□□ -0.73
FAM49B-208ENST00000518344 CFC1P0CG37 223 aa10.52□□□□□ -0.73
FAM49B-208ENST00000518344 PRO1933Q9H354 126 aa10.52□□□□□ -0.73
FAM49B-208ENST00000518344 hADV29S1A0JD25 119 aa10.51□□□□□ -0.73
FAM49B-208ENST00000518344 BVES-AS1Q5T3Y7 98 aa10.5□□□□□ -0.73
FAM49B-208ENST00000518344 Q6ZQY7 126 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms