RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 PDCD10Q9BUL8 212 aa-0.36□□□□□ -2.47
SKP1-203ENST00000517625 SNRNP25Q9BV90 132 aaKnown RBP-0.36□□□□□ -2.47
SKP1-203ENST00000517625 RERGLQ9H628 205 aa-0.36□□□□□ -2.47
SKP1-203ENST00000517625 MROH1Q8NDA8 1641 aa-0.36□□□□□ -2.47
SKP1-203ENST00000517625 CLIP1P30622 1438 aa-0.37□□□□□ -2.47
SKP1-203ENST00000517625 CTXND1A0A1B0GTU2 59 aa-0.37□□□□□ -2.47
SKP1-203ENST00000517625 BCE1O60756 84 aa-0.37□□□□□ -2.47
SKP1-203ENST00000517625 HIST1H1DP16402 221 aaKnown RBP-0.37□□□□□ -2.47
SKP1-203ENST00000517625 SPRR1AP35321 89 aa-0.37□□□□□ -2.47
SKP1-203ENST00000517625 SERP1Q9Y6X1 66 aa-0.37□□□□□ -2.47
SKP1-203ENST00000517625 MRC1P22897 1456 aa-0.37□□□□□ -2.47
SKP1-203ENST00000517625 NLRP1Q9C000 1473 aa-0.37□□□□□ -2.47
SKP1-203ENST00000517625 PI4KAP42356 2102 aa-0.37□□□□□ -2.47
SKP1-203ENST00000517625 GOLGA4Q13439 2230 aaKnown RBP-0.37□□□□□ -2.47
SKP1-203ENST00000517625 MYH6P13533 1939 aa-0.38□□□□□ -2.47
SKP1-203ENST00000517625 HAMPP81172 84 aa-0.38□□□□□ -2.47
SKP1-203ENST00000517625 DCDP81605 110 aaKnown RBP-0.38□□□□□ -2.47
SKP1-203ENST00000517625 Q6AWC8 147 aa-0.38□□□□□ -2.47
SKP1-203ENST00000517625 TTC9CQ8N5M4 171 aa-0.38□□□□□ -2.47
SKP1-203ENST00000517625 Q8N8P6 123 aa-0.38□□□□□ -2.47
SKP1-203ENST00000517625 AMELXQ99217 191 aa-0.38□□□□□ -2.47
SKP1-203ENST00000517625 TP53AIP1Q9HCN2 124 aa-0.38□□□□□ -2.47
SKP1-203ENST00000517625 BTG2P78543 158 aa-0.39□□□□□ -2.47
SKP1-203ENST00000517625 NAA60Q9H7X0 242 aa-0.39□□□□□ -2.47
SKP1-203ENST00000517625 V9GYH0 126 aa-0.39□□□□□ -2.47
SKP1-203ENST00000517625 CCDC180Q9P1Z9 1646 aa-0.39□□□□□ -2.47
SKP1-203ENST00000517625 INO80Q9ULG1 1556 aaPredicted RBP-0.4□□□□□ -2.47
SKP1-203ENST00000517625 UQCR11O14957 56 aa-0.4□□□□□ -2.47
SKP1-203ENST00000517625 MT2AP02795 61 aa-0.4□□□□□ -2.47
SKP1-203ENST00000517625 MT1FP04733 61 aa-0.4□□□□□ -2.47
SKP1-203ENST00000517625 TPPP2P59282 170 aa-0.4□□□□□ -2.47
SKP1-203ENST00000517625 KRTAP19-8Q3LI54 63 aa-0.4□□□□□ -2.47
SKP1-203ENST00000517625 KRTAP19-7Q3SYF9 63 aa-0.4□□□□□ -2.47
SKP1-203ENST00000517625 TMEM170BQ5T4T1 132 aa-0.4□□□□□ -2.47
SKP1-203ENST00000517625 ARL11Q969Q4 196 aa-0.4□□□□□ -2.47
SKP1-203ENST00000517625 PPP3R2Q96LZ3 170 aa-0.4□□□□□ -2.47
SKP1-203ENST00000517625 FAM208AQ9UK61 1670 aaKnown RBP-0.4□□□□□ -2.47
SKP1-203ENST00000517625 KRTAP6-2Q3LI66 62 aa-0.41□□□□□ -2.48
SKP1-203ENST00000517625 DEFB124Q8NES8 71 aa-0.41□□□□□ -2.48
SKP1-203ENST00000517625 LINC00470Q9BZP3 86 aa-0.41□□□□□ -2.48
SKP1-203ENST00000517625 PIK3C2BO00750 1634 aa-0.42□□□□□ -2.48
SKP1-203ENST00000517625 ATP7AQ04656 1500 aa-0.42□□□□□ -2.48
SKP1-203ENST00000517625 ERICH3Q5RHP9 1530 aa-0.42□□□□□ -2.48
SKP1-203ENST00000517625 I3L2K1 104 aa-0.42□□□□□ -2.48
SKP1-203ENST00000517625 APOC3P02656 99 aa-0.42□□□□□ -2.48
SKP1-203ENST00000517625 COX6B1P14854 86 aa-0.42□□□□□ -2.48
SKP1-203ENST00000517625 PIGYQ3MUY2 71 aa-0.42□□□□□ -2.48
SKP1-203ENST00000517625 CCDC58Q4VC31 144 aa-0.42□□□□□ -2.48
SKP1-203ENST00000517625 Q56UQ5 140 aa-0.42□□□□□ -2.48
SKP1-203ENST00000517625 BAGE2Q86Y30 109 aa-0.42□□□□□ -2.48
SKP1-203ENST00000517625 LSM10Q969L4 123 aaKnown RBP-0.42□□□□□ -2.48
SKP1-203ENST00000517625 MGST2Q99735 147 aa-0.42□□□□□ -2.48
SKP1-203ENST00000517625 DOCK1Q14185 1865 aa-0.42□□□□□ -2.48
SKP1-203ENST00000517625 DOCK2Q92608 1830 aa-0.43□□□□□ -2.48
SKP1-203ENST00000517625 WNK3Q9BYP7 1800 aa-0.43□□□□□ -2.48
SKP1-203ENST00000517625 CFAP74Q9C0B2 1584 aa-0.43□□□□□ -2.48
SKP1-203ENST00000517625 NAIPQ13075 1403 aa-0.43□□□□□ -2.48
SKP1-203ENST00000517625 ANKRD50Q9ULJ7 1429 aa-0.43□□□□□ -2.48
SKP1-203ENST00000517625 TRBV6-1A0A0K0K1D8 114 aa-0.43□□□□□ -2.48
SKP1-203ENST00000517625 LOC285095A0A1B0GVY8 99 aa-0.43□□□□□ -2.48
SKP1-203ENST00000517625 LOC730098B7Z3J9 87 aa-0.43□□□□□ -2.48
SKP1-203ENST00000517625 F8VRH5 84 aa-0.43□□□□□ -2.48
SKP1-203ENST00000517625 MEIG1Q5JSS6 88 aa-0.43□□□□□ -2.48
SKP1-203ENST00000517625 LINC00472Q9H8W2 130 aa-0.43□□□□□ -2.48
SKP1-203ENST00000517625 DYNLRB1Q9NP97 96 aa-0.43□□□□□ -2.48
SKP1-203ENST00000517625 MROH2AA6NES4 1674 aa-0.43□□□□□ -2.48
SKP1-203ENST00000517625 TRBV7-3A0A075B6L6 115 aa-0.44□□□□□ -2.48
SKP1-203ENST00000517625 FAM25AB3EWG3 89 aa-0.44□□□□□ -2.48
SKP1-203ENST00000517625 FAM25CB3EWG5 89 aa-0.44□□□□□ -2.48
SKP1-203ENST00000517625 FAM25GB3EWG6 89 aa-0.44□□□□□ -2.48
SKP1-203ENST00000517625 PRM1P04553 51 aa-0.44□□□□□ -2.48
SKP1-203ENST00000517625 S100A12P80511 92 aa-0.44□□□□□ -2.48
SKP1-203ENST00000517625 Q6JHZ5 121 aa-0.44□□□□□ -2.48
SKP1-203ENST00000517625 SPANXDQ9BXN6 97 aa-0.44□□□□□ -2.48
SKP1-203ENST00000517625 NDUFA4L2Q9NRX3 87 aa-0.44□□□□□ -2.48
SKP1-203ENST00000517625 DUOX1Q9NRD9 1551 aa-0.45□□□□□ -2.48
SKP1-203ENST00000517625 NDUFA2O43678 99 aa-0.45□□□□□ -2.48
SKP1-203ENST00000517625 SSSCA1O60232 199 aa-0.45□□□□□ -2.48
SKP1-203ENST00000517625 FGF7P21781 194 aa-0.45□□□□□ -2.48
SKP1-203ENST00000517625 C8orf59Q8N0T1 100 aaPredicted RBP-0.45□□□□□ -2.48
SKP1-203ENST00000517625 LINC01558Q9Y6Z2 57 aa-0.45□□□□□ -2.48
SKP1-203ENST00000517625 ABCC1P33527 1531 aa-0.45□□□□□ -2.48
SKP1-203ENST00000517625 ABCA9Q8IUA7 1624 aa-0.46□□□□□ -2.48
SKP1-203ENST00000517625 ARHGAP35Q9NRY4 1499 aa-0.46□□□□□ -2.48
SKP1-203ENST00000517625 MYH9P35579 1960 aaKnown RBP-0.46□□□□□ -2.48
SKP1-203ENST00000517625 A0A1B0GUL6 1792 aa-0.46□□□□□ -2.48
SKP1-203ENST00000517625 IGLC7A0M8Q6 106 aa-0.46□□□□□ -2.48
SKP1-203ENST00000517625 APOC2P02655 101 aa-0.46□□□□□ -2.48
SKP1-203ENST00000517625 C1orf54Q8WWF1 131 aa-0.46□□□□□ -2.48
SKP1-203ENST00000517625 PLXNB2O15031 1838 aa-0.46□□□□□ -2.48
SKP1-203ENST00000517625 CDC42BPGQ6DT37 1551 aa-0.46□□□□□ -2.48
SKP1-203ENST00000517625 NSD3Q9BZ95 1437 aa-0.47□□□□□ -2.48
SKP1-203ENST00000517625 NALCNQ8IZF0 1738 aa-0.47□□□□□ -2.48
SKP1-203ENST00000517625 DEFB121Q5J5C9 76 aa-0.47□□□□□ -2.48
SKP1-203ENST00000517625 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.47□□□□□ -2.48
SKP1-203ENST00000517625 RGPD2P0DJD1 1756 aa-0.47□□□□□ -2.49
SKP1-203ENST00000517625 ANKRD36CQ5JPF3 1778 aa-0.47□□□□□ -2.49
SKP1-203ENST00000517625 URB2Q14146 1524 aaKnown RBP-0.48□□□□□ -2.49
SKP1-203ENST00000517625 K7EP13 123 aa-0.48□□□□□ -2.49
SKP1-203ENST00000517625 GNG7O60262 68 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms