RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 A0A096LPF7 62 aa2.45□□□□□ -2.02
CAST-242ENST00000515063 ANGP03950 147 aaKnown RBP2.45□□□□□ -2.02
CAST-242ENST00000515063 PFN2P35080 140 aa2.45□□□□□ -2.02
CAST-242ENST00000515063 DEFB135Q30KP9 77 aa2.45□□□□□ -2.02
CAST-242ENST00000515063 Q6JHZ5 121 aa2.45□□□□□ -2.02
CAST-242ENST00000515063 OR13C6PQ8NH95 151 aa2.45□□□□□ -2.02
CAST-242ENST00000515063 C11orf68Q9H3H3 251 aaKnown RBP2.45□□□□□ -2.02
CAST-242ENST00000515063 JMJD1CQ15652 2540 aa2.45□□□□□ -2.02
CAST-242ENST00000515063 IGLV8-61A0A075B6I0 122 aa2.44□□□□□ -2.02
CAST-242ENST00000515063 TRBV7-6A0A0J9YX20 115 aa2.44□□□□□ -2.02
CAST-242ENST00000515063 TRBV10-3A0A0K0K1G6 114 aa2.44□□□□□ -2.02
CAST-242ENST00000515063 LECT2O14960 151 aa2.44□□□□□ -2.02
CAST-242ENST00000515063 CCKP06307 115 aa2.44□□□□□ -2.02
CAST-242ENST00000515063 PDE6GP18545 87 aa2.44□□□□□ -2.02
CAST-242ENST00000515063 SPAG11BQ08648 103 aa2.44□□□□□ -2.02
CAST-242ENST00000515063 ATP5EP2Q5VTU8 51 aa2.44□□□□□ -2.02
CAST-242ENST00000515063 LYPD5Q6UWN5 251 aa2.44□□□□□ -2.02
CAST-242ENST00000515063 LINC00575Q6W349 94 aa2.44□□□□□ -2.02
CAST-242ENST00000515063 Q8N814 137 aa2.44□□□□□ -2.02
CAST-242ENST00000515063 SMR3AQ99954 134 aa2.44□□□□□ -2.02
CAST-242ENST00000515063 ACANP16112 2415 aa2.44□□□□□ -2.02
CAST-242ENST00000515063 ATOX1O00244 68 aa2.43□□□□□ -2.02
CAST-242ENST00000515063 UQCRQO14949 82 aa2.43□□□□□ -2.02
CAST-242ENST00000515063 BCE1O60756 84 aa2.43□□□□□ -2.02
CAST-242ENST00000515063 IGLV6-57P01721 117 aa2.43□□□□□ -2.02
CAST-242ENST00000515063 HIST1H4AP62805 103 aaKnown RBP2.43□□□□□ -2.02
CAST-242ENST00000515063 EGFEM1PQ0D2K5 195 aa2.43□□□□□ -2.02
CAST-242ENST00000515063 ENHOQ6UWT2 76 aa2.43□□□□□ -2.02
CAST-242ENST00000515063 SMCR5Q8TEV8 140 aa2.43□□□□□ -2.02
CAST-242ENST00000515063 MTORP42345 2549 aa2.43□□□□□ -2.02
CAST-242ENST00000515063 ITPR2Q14571 2701 aa2.43□□□□□ -2.02
CAST-242ENST00000515063 LOC110117498A0A087WWA1 95 aa2.42□□□□□ -2.02
CAST-242ENST00000515063 FAM236AA0A1B0GUQ0 79 aa2.42□□□□□ -2.02
CAST-242ENST00000515063 FAM236BA0A1B0GV22 79 aa2.42□□□□□ -2.02
CAST-242ENST00000515063 hADV29S1A0JD25 119 aa2.42□□□□□ -2.02
CAST-242ENST00000515063 H0Y9J4 135 aa2.42□□□□□ -2.02
CAST-242ENST00000515063 RTL8CO15255 209 aa2.42□□□□□ -2.02
CAST-242ENST00000515063 C6orf99Q4VX62 202 aa2.42□□□□□ -2.02
CAST-242ENST00000515063 LINC01556Q5JQF7 62 aa2.42□□□□□ -2.02
CAST-242ENST00000515063 KRTAP26-1Q6PEX3 210 aa2.42□□□□□ -2.02
CAST-242ENST00000515063 CLPSL2Q6UWE3 100 aa2.42□□□□□ -2.02
CAST-242ENST00000515063 UNQ6190/PRO20217Q6UXQ8 127 aa2.42□□□□□ -2.02
CAST-242ENST00000515063 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.42□□□□□ -2.02
CAST-242ENST00000515063 C6orf223Q8N319 242 aa2.42□□□□□ -2.02
CAST-242ENST00000515063 LINC00526Q96FQ7 95 aa2.42□□□□□ -2.02
CAST-242ENST00000515063 C14orf132Q9NPU4 83 aa2.42□□□□□ -2.02
CAST-242ENST00000515063 KLK12Q9UKR0 248 aa2.42□□□□□ -2.02
CAST-242ENST00000515063 FN1P02751 2386 aaKnown RBP2.42□□□□□ -2.02
CAST-242ENST00000515063 IGLV10-54A0A075B6I4 117 aa2.41□□□□□ -2.02
CAST-242ENST00000515063 CCDC179H3BU77 68 aa2.41□□□□□ -2.02
CAST-242ENST00000515063 M0R378 163 aa2.41□□□□□ -2.02
CAST-242ENST00000515063 DEFB4AO15263 64 aa2.41□□□□□ -2.02
CAST-242ENST00000515063 TLX1NBP0CAT3 122 aa2.41□□□□□ -2.02
CAST-242ENST00000515063 CRYGAP11844 174 aa2.41□□□□□ -2.02
CAST-242ENST00000515063 COX7CP15954 63 aa2.41□□□□□ -2.02
CAST-242ENST00000515063 ELOF1P60002 83 aaKnown RBP2.41□□□□□ -2.02
CAST-242ENST00000515063 RBM3P98179 157 aaKnown RBP2.41□□□□□ -2.02
CAST-242ENST00000515063 RPL18AQ02543 176 aaKnown RBP2.41□□□□□ -2.02
CAST-242ENST00000515063 PRR4Q16378 134 aa2.41□□□□□ -2.02
CAST-242ENST00000515063 KPRPQ5T749 579 aaPredicted RBP2.41□□□□□ -2.02
CAST-242ENST00000515063 C3orf22Q8N5N4 141 aa2.41□□□□□ -2.02
CAST-242ENST00000515063 DIRC1Q969H9 104 aa2.41□□□□□ -2.02
CAST-242ENST00000515063 UBL5Q9BZL1 73 aa2.41□□□□□ -2.02
CAST-242ENST00000515063 LINC00846Q9NV44 126 aa2.41□□□□□ -2.02
CAST-242ENST00000515063 C6orf48Q9UBA6 75 aa2.41□□□□□ -2.02
CAST-242ENST00000515063 NSD1Q96L73 2696 aaPredicted RBP2.41□□□□□ -2.02
CAST-242ENST00000515063 NBEAL1Q6ZS30 2694 aa2.4□□□□□ -2.02
CAST-242ENST00000515063 TRAV23DV6A0A075B6W5 121 aa2.4□□□□□ -2.03
CAST-242ENST00000515063 A0A1B0GW54 56 aa2.4□□□□□ -2.03
CAST-242ENST00000515063 NDUFC2-KCTD14E9PQ53 114 aa2.4□□□□□ -2.03
CAST-242ENST00000515063 NCR3O14931 201 aa2.4□□□□□ -2.03
CAST-242ENST00000515063 COX7BP24311 80 aa2.4□□□□□ -2.03
CAST-242ENST00000515063 PRR3P79522 188 aaKnown RBP2.4□□□□□ -2.03
CAST-242ENST00000515063 C9orf116Q5BN46 136 aaPredicted RBP2.4□□□□□ -2.03
CAST-242ENST00000515063 C9orf129Q5T035 196 aaKnown RBP2.4□□□□□ -2.03
CAST-242ENST00000515063 Q6ZQT0 140 aa2.4□□□□□ -2.03
CAST-242ENST00000515063 KRTAP11-1Q8IUC1 163 aa2.4□□□□□ -2.03
CAST-242ENST00000515063 Q8NDZ9 215 aa2.4□□□□□ -2.03
CAST-242ENST00000515063 CAMK2N2Q96S95 79 aa2.4□□□□□ -2.03
CAST-242ENST00000515063 CUBNO60494 3623 aa2.4□□□□□ -2.03
CAST-242ENST00000515063 DEFB131BA0A096LNP1 70 aa2.39□□□□□ -2.03
CAST-242ENST00000515063 TRBV7-4A0A0J9YYF1 115 aa2.39□□□□□ -2.03
CAST-242ENST00000515063 ZNF73O43830 326 aaPredicted RBP2.39□□□□□ -2.03
CAST-242ENST00000515063 HTN3P15516 51 aa2.39□□□□□ -2.03
CAST-242ENST00000515063 ESRGQ1W209 222 aa2.39□□□□□ -2.03
CAST-242ENST00000515063 SMIM20Q8N5G0 67 aa2.39□□□□□ -2.03
CAST-242ENST00000515063 SERP2Q8N6R1 65 aa2.39□□□□□ -2.03
CAST-242ENST00000515063 C15orf56Q8N910 161 aa2.39□□□□□ -2.03
CAST-242ENST00000515063 RMI2Q96E14 147 aa2.39□□□□□ -2.03
CAST-242ENST00000515063 DSCR8Q96T75 97 aa2.39□□□□□ -2.03
CAST-242ENST00000515063 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
CAST-242ENST00000515063 NIPBLQ6KC79 2804 aaeCLIP2.38□□□□□ -2.031e-7■□□□□ 11.1
CAST-242ENST00000515063 TRAV10A0A0B4J240 114 aa2.38□□□□□ -2.03
CAST-242ENST00000515063 KRTAP10-8P60410 259 aa2.38□□□□□ -2.03
CAST-242ENST00000515063 SYCNQ0VAF6 134 aa2.38□□□□□ -2.03
CAST-242ENST00000515063 C9orf153Q5TBE3 101 aa2.38□□□□□ -2.03
CAST-242ENST00000515063 Q6ZQY7 126 aa2.38□□□□□ -2.03
CAST-242ENST00000515063 Q6ZRU5 148 aa2.38□□□□□ -2.03
CAST-242ENST00000515063 WFDC10BQ8IUB3 73 aa2.38□□□□□ -2.03
CAST-242ENST00000515063 UPK3BQ9BT76 320 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms