RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 IGLV1-50A0A075B6I6 118 aa6□□□□□ -1.45
TOPBP1-209ENST00000513818 LOC107984156A0A0G2JMH3 177 aa6□□□□□ -1.45
TOPBP1-209ENST00000513818 TRBV10-3A0A0K0K1G6 114 aa6□□□□□ -1.45
TOPBP1-209ENST00000513818 M0R378 163 aa6□□□□□ -1.45
TOPBP1-209ENST00000513818 ARL17AQ8IVW1 177 aa6□□□□□ -1.45
TOPBP1-209ENST00000513818 IGLV7-43P04211 117 aa5.99□□□□□ -1.45
TOPBP1-209ENST00000513818 MUSTN1Q8IVN3 82 aa5.99□□□□□ -1.45
TOPBP1-209ENST00000513818 SPANXB1Q9NS25 103 aaPredicted RBP5.99□□□□□ -1.45
TOPBP1-209ENST00000513818 BCE1O60756 84 aa5.98□□□□□ -1.45
TOPBP1-209ENST00000513818 NDUFC2O95298 119 aa5.98□□□□□ -1.45
TOPBP1-209ENST00000513818 DDTP30046 118 aa5.98□□□□□ -1.45
TOPBP1-209ENST00000513818 PRLHP81277 87 aa5.98□□□□□ -1.45
TOPBP1-209ENST00000513818 C2orf91Q6ZV80 131 aa5.98□□□□□ -1.45
TOPBP1-209ENST00000513818 TMEM126AQ9H061 195 aa5.98□□□□□ -1.45
TOPBP1-209ENST00000513818 TNXBP22105 4242 aa5.97□□□□□ -1.45
TOPBP1-209ENST00000513818 SEC61BP60468 96 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-209ENST00000513818 SRSF9Q13242 221 aaKnown RBP eCLIP5.97□□□□□ -1.45
TOPBP1-209ENST00000513818 SLC25A34Q6PIV7 304 aa5.97□□□□□ -1.45
TOPBP1-209ENST00000513818 REG3GQ6UW15 175 aa5.97□□□□□ -1.45
TOPBP1-209ENST00000513818 TRBV10-2A0A0K0K1G8 114 aa5.96□□□□□ -1.46
TOPBP1-209ENST00000513818 LOC105371267A0A1B0GV96 52 aa5.96□□□□□ -1.46
TOPBP1-209ENST00000513818 DLEU1O43261 78 aa5.96□□□□□ -1.46
TOPBP1-209ENST00000513818 S100A7L2Q5SY68 101 aa5.96□□□□□ -1.46
TOPBP1-209ENST00000513818 FAM19A1Q7Z5A9 133 aa5.96□□□□□ -1.46
TOPBP1-209ENST00000513818 OR13C6PQ8NH95 151 aa5.96□□□□□ -1.46
TOPBP1-209ENST00000513818 C12orf57Q99622 126 aa5.96□□□□□ -1.46
TOPBP1-209ENST00000513818 IFITM1P13164 125 aa5.95□□□□□ -1.46
TOPBP1-209ENST00000513818 UBE2AP49459 152 aa5.95□□□□□ -1.46
TOPBP1-209ENST00000513818 LINC00337Q8N6G1 96 aa5.95□□□□□ -1.46
TOPBP1-209ENST00000513818 HIST1H4GQ99525 98 aa5.95□□□□□ -1.46
TOPBP1-209ENST00000513818 TRAV23DV6A0A075B6W5 121 aa5.94□□□□□ -1.46
TOPBP1-209ENST00000513818 IGLV6-57P01721 117 aa5.94□□□□□ -1.46
TOPBP1-209ENST00000513818 SPINK6Q6UWN8 80 aa5.94□□□□□ -1.46
TOPBP1-209ENST00000513818 Q6ZVH6 145 aa5.94□□□□□ -1.46
TOPBP1-209ENST00000513818 KRTAP13-1Q8IUC0 172 aa5.94□□□□□ -1.46
TOPBP1-209ENST00000513818 PRO1933Q9H354 126 aa5.94□□□□□ -1.46
TOPBP1-209ENST00000513818 HERC1Q15751 4861 aa5.93□□□□□ -1.46
TOPBP1-209ENST00000513818 ZNF861PO60384 105 aa5.93□□□□□ -1.46
TOPBP1-209ENST00000513818 S100A12P80511 92 aa5.93□□□□□ -1.46
TOPBP1-209ENST00000513818 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
TOPBP1-209ENST00000513818 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
TOPBP1-209ENST00000513818 KCNQ1DNQ9H478 68 aa5.93□□□□□ -1.46
TOPBP1-209ENST00000513818 ETDCA0A1B0GVM5 59 aa5.92□□□□□ -1.46
TOPBP1-209ENST00000513818 A6NDN8 102 aa5.92□□□□□ -1.46
TOPBP1-209ENST00000513818 H0Y9J4 135 aa5.92□□□□□ -1.46
TOPBP1-209ENST00000513818 SMIM6P0DI80 62 aa5.92□□□□□ -1.46
TOPBP1-209ENST00000513818 SPRR1AP35321 89 aa5.92□□□□□ -1.46
TOPBP1-209ENST00000513818 RPL28P46779 137 aaKnown RBP5.92□□□□□ -1.46
TOPBP1-209ENST00000513818 COPS9Q8WXC6 57 aa5.92□□□□□ -1.46
TOPBP1-209ENST00000513818 DIRC1Q969H9 104 aa5.92□□□□□ -1.46
TOPBP1-209ENST00000513818 HIGD2AQ9BW72 106 aa5.92□□□□□ -1.46
TOPBP1-209ENST00000513818 HIGD1BQ9P298 99 aa5.92□□□□□ -1.46
TOPBP1-209ENST00000513818 KRTAP4-16G5E9R7 235 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-209ENST00000513818 PPDPFQ9H3Y8 114 aa5.91□□□□□ -1.46
TOPBP1-209ENST00000513818 CBY1Q9Y3M2 126 aa5.91□□□□□ -1.46
TOPBP1-209ENST00000513818 LINC00518Q8N0U6 118 aa5.9□□□□□ -1.46
TOPBP1-209ENST00000513818 UQCR10Q9UDW1 63 aa5.9□□□□□ -1.46
TOPBP1-209ENST00000513818 ZNF73O43830 326 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-209ENST00000513818 FXYD2P54710 66 aa5.89□□□□□ -1.47
TOPBP1-209ENST00000513818 C6orf99Q4VX62 202 aa5.89□□□□□ -1.47
TOPBP1-209ENST00000513818 KRTAP1-4P0C5Y4 121 aa5.88□□□□□ -1.47
TOPBP1-209ENST00000513818 RPL13AP40429 203 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-209ENST00000513818 CEND1Q8N111 149 aa5.88□□□□□ -1.47
TOPBP1-209ENST00000513818 SMCR5Q8TEV8 140 aa5.88□□□□□ -1.47
TOPBP1-209ENST00000513818 Q9BRP9 147 aa5.88□□□□□ -1.47
TOPBP1-209ENST00000513818 ANAPC11Q9NYG5 84 aa5.88□□□□□ -1.47
TOPBP1-209ENST00000513818 TRAV13-2A0A0B4J235 113 aa5.87□□□□□ -1.47
TOPBP1-209ENST00000513818 KRTAP29-1A8MX34 341 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-209ENST00000513818 H7C2G1 150 aa5.87□□□□□ -1.47
TOPBP1-209ENST00000513818 ERC2-IT1O76042 136 aa5.87□□□□□ -1.47
TOPBP1-209ENST00000513818 Q6ZRX8 168 aa5.87□□□□□ -1.47
TOPBP1-209ENST00000513818 PRR26Q8N8Z3 221 aa5.87□□□□□ -1.47
TOPBP1-209ENST00000513818 SMIM11BQ8TCY0 68 aa5.87□□□□□ -1.47
TOPBP1-209ENST00000513818 MT1HL1P0DM35 61 aa5.86□□□□□ -1.47
TOPBP1-209ENST00000513818 HSD52Q0P140 79 aa5.86□□□□□ -1.47
TOPBP1-209ENST00000513818 K7ERJ3 54 aa5.85□□□□□ -1.47
TOPBP1-209ENST00000513818 OXTP01178 125 aa5.85□□□□□ -1.47
TOPBP1-209ENST00000513818 CFC1BP0CG36 223 aa5.85□□□□□ -1.47
TOPBP1-209ENST00000513818 CFC1P0CG37 223 aa5.85□□□□□ -1.47
TOPBP1-209ENST00000513818 TAL2Q16559 108 aa5.85□□□□□ -1.47
TOPBP1-209ENST00000513818 LINC01600Q96MT4 127 aa5.85□□□□□ -1.47
TOPBP1-209ENST00000513818 A0A087X002 238 aa5.84□□□□□ -1.47
TOPBP1-209ENST00000513818 COX7BP24311 80 aa5.84□□□□□ -1.47
TOPBP1-209ENST00000513818 ELOF1P60002 83 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-209ENST00000513818 RAB37Q96AX2 223 aa5.84□□□□□ -1.47
TOPBP1-209ENST00000513818 NHP2Q9NX24 153 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-209ENST00000513818 DMBT1Q9UGM3 2413 aaPredicted RBP5.84□□□□□ -1.48
TOPBP1-209ENST00000513818 A0A0B4J2C4 111 aa5.83□□□□□ -1.48
TOPBP1-209ENST00000513818 ST20-AS1Q8NBB2 130 aa5.83□□□□□ -1.48
TOPBP1-209ENST00000513818 SPRR4Q96PI1 79 aa5.83□□□□□ -1.48
TOPBP1-209ENST00000513818 HINT1P49773 126 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-209ENST00000513818 VAMP3Q15836 100 aa5.81□□□□□ -1.48
TOPBP1-209ENST00000513818 Q1RN00 199 aa5.81□□□□□ -1.48
TOPBP1-209ENST00000513818 HMCN2Q8NDA2 5059 aa5.81□□□□□ -1.48
TOPBP1-209ENST00000513818 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
TOPBP1-209ENST00000513818 A0A1B0GWB2 263 aa5.8□□□□□ -1.48
TOPBP1-209ENST00000513818 TSTD3H0UI37 97 aa5.8□□□□□ -1.48
TOPBP1-209ENST00000513818 KRTAP10-8P60410 259 aa5.8□□□□□ -1.48
TOPBP1-209ENST00000513818 KRTAP13-2Q52LG2 175 aa5.8□□□□□ -1.48
TOPBP1-209ENST00000513818 BVES-AS1Q5T3Y7 98 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms