RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 NUPR1O60356 82 aa1.48□□□□□ -2.17
TOPBP1-208ENST00000511439 PPYP01298 95 aa1.48□□□□□ -2.17
TOPBP1-208ENST00000511439 ZNF345Q14585 488 aa1.48□□□□□ -2.17
TOPBP1-208ENST00000511439 C12orf73Q69YU5 71 aa1.48□□□□□ -2.17
TOPBP1-208ENST00000511439 LINC00305Q7Z4B0 112 aa1.48□□□□□ -2.17
TOPBP1-208ENST00000511439 RNASE11Q8TAA1 199 aaKnown RBP1.48□□□□□ -2.17
TOPBP1-208ENST00000511439 LINC00526Q96FQ7 95 aa1.48□□□□□ -2.17
TOPBP1-208ENST00000511439 C14orf132Q9NPU4 83 aa1.48□□□□□ -2.17
TOPBP1-208ENST00000511439 TRBV27A0A0K0K1C4 114 aa1.47□□□□□ -2.17
TOPBP1-208ENST00000511439 RBAKDNA6NC62 111 aa1.47□□□□□ -2.17
TOPBP1-208ENST00000511439 SPINK1P00995 79 aa1.47□□□□□ -2.17
TOPBP1-208ENST00000511439 FXYD4P59646 89 aa1.47□□□□□ -2.17
TOPBP1-208ENST00000511439 LSM3P62310 102 aaKnown RBP1.47□□□□□ -2.17
TOPBP1-208ENST00000511439 SLC38A11Q08AI6 406 aa1.47□□□□□ -2.17
TOPBP1-208ENST00000511439 PATE2Q6UY27 113 aa1.47□□□□□ -2.17
TOPBP1-208ENST00000511439 Q6ZQT0 140 aa1.47□□□□□ -2.17
TOPBP1-208ENST00000511439 OR2T35Q8NGX2 323 aa1.47□□□□□ -2.17
TOPBP1-208ENST00000511439 TRGV9Q99603 122 aa1.47□□□□□ -2.17
TOPBP1-208ENST00000511439 MUC5ACP98088 5654 aa1.47□□□□□ -2.17
TOPBP1-208ENST00000511439 C17orf112F2Z3M2 114 aa1.46□□□□□ -2.18
TOPBP1-208ENST00000511439 H3BMG7 143 aa1.46□□□□□ -2.18
TOPBP1-208ENST00000511439 K7ERJ3 54 aa1.46□□□□□ -2.18
TOPBP1-208ENST00000511439 GNGT2O14610 69 aa1.46□□□□□ -2.18
TOPBP1-208ENST00000511439 HIST1H1DP16402 221 aaKnown RBP1.46□□□□□ -2.18
TOPBP1-208ENST00000511439 MT4P47944 62 aa1.46□□□□□ -2.18
TOPBP1-208ENST00000511439 MRPS36P82909 103 aaKnown RBP1.46□□□□□ -2.18
TOPBP1-208ENST00000511439 C7orf65Q6ZTY9 151 aa1.46□□□□□ -2.18
TOPBP1-208ENST00000511439 OR5H6Q8NGV6 325 aa1.46□□□□□ -2.18
TOPBP1-208ENST00000511439 PRELID3AQ96N28 172 aa1.46□□□□□ -2.18
TOPBP1-208ENST00000511439 AP1S3Q96PC3 154 aa1.46□□□□□ -2.18
TOPBP1-208ENST00000511439 NPVFQ9HCQ7 196 aa1.46□□□□□ -2.18
TOPBP1-208ENST00000511439 SDHAF1A6NFY7 115 aa1.45□□□□□ -2.18
TOPBP1-208ENST00000511439 C9orf92A6NGG3 77 aa1.45□□□□□ -2.18
TOPBP1-208ENST00000511439 J3QR89 54 aa1.45□□□□□ -2.18
TOPBP1-208ENST00000511439 LYRM1O43325 122 aa1.45□□□□□ -2.18
TOPBP1-208ENST00000511439 PGLYRP1O75594 196 aaPredicted RBP1.45□□□□□ -2.18
TOPBP1-208ENST00000511439 RPL37P61927 97 aaKnown RBP1.45□□□□□ -2.18
TOPBP1-208ENST00000511439 RPS29P62273 56 aaKnown RBP1.45□□□□□ -2.18
TOPBP1-208ENST00000511439 RPS25P62851 125 aaKnown RBP1.45□□□□□ -2.18
TOPBP1-208ENST00000511439 Q5XG85 94 aa1.45□□□□□ -2.18
TOPBP1-208ENST00000511439 XAF1Q6GPH4 301 aa1.45□□□□□ -2.18
TOPBP1-208ENST00000511439 VPS25Q9BRG1 176 aa1.45□□□□□ -2.18
TOPBP1-208ENST00000511439 CST9LQ9H4G1 147 aa1.45□□□□□ -2.18
TOPBP1-208ENST00000511439 COMMD3Q9UBI1 195 aa1.45□□□□□ -2.18
TOPBP1-208ENST00000511439 U3KQ87 197 aa1.45□□□□□ -2.18
TOPBP1-208ENST00000511439 TRBV7-3A0A075B6L6 115 aa1.44□□□□□ -2.18
TOPBP1-208ENST00000511439 A0A0G2JND7 137 aa1.44□□□□□ -2.18
TOPBP1-208ENST00000511439 TRBV10-1A0A0K0K1A3 114 aa1.44□□□□□ -2.18
TOPBP1-208ENST00000511439 F8W036 122 aa1.44□□□□□ -2.18
TOPBP1-208ENST00000511439 BCE1O60756 84 aa1.44□□□□□ -2.18
TOPBP1-208ENST00000511439 NCR2O95944 276 aa1.44□□□□□ -2.18
TOPBP1-208ENST00000511439 S100A10P60903 97 aa1.44□□□□□ -2.18
TOPBP1-208ENST00000511439 NCS1P62166 190 aa1.44□□□□□ -2.18
TOPBP1-208ENST00000511439 UBE2D2P62837 147 aa1.44□□□□□ -2.18
TOPBP1-208ENST00000511439 WHAMMP3Q1A5X7 153 aa1.44□□□□□ -2.18
TOPBP1-208ENST00000511439 NMSQ5H8A3 153 aa1.44□□□□□ -2.18
TOPBP1-208ENST00000511439 Q6AWC8 147 aa1.44□□□□□ -2.18
TOPBP1-208ENST00000511439 TMEM14EPQ6UXP3 125 aa1.44□□□□□ -2.18
TOPBP1-208ENST00000511439 BRK1Q8WUW1 75 aa1.44□□□□□ -2.18
TOPBP1-208ENST00000511439 CHCHD1Q96BP2 118 aaKnown RBP1.44□□□□□ -2.18
TOPBP1-208ENST00000511439 AGPAT4-IT1Q9H0P7 198 aa1.44□□□□□ -2.18
TOPBP1-208ENST00000511439 OR5AC2Q9NZP5 309 aa1.44□□□□□ -2.18
TOPBP1-208ENST00000511439 TRBV20-1A0A075B6N2 111 aa1.43□□□□□ -2.18
TOPBP1-208ENST00000511439 TRBV25-1A0A075B6N4 114 aa1.43□□□□□ -2.18
TOPBP1-208ENST00000511439 CEBPZOSA8MTT3 80 aa1.43□□□□□ -2.18
TOPBP1-208ENST00000511439 UQCRQO14949 82 aa1.43□□□□□ -2.18
TOPBP1-208ENST00000511439 HYPMO75409 117 aa1.43□□□□□ -2.18
TOPBP1-208ENST00000511439 TPT1P13693 172 aaKnown RBP1.43□□□□□ -2.18
TOPBP1-208ENST00000511439 FABP4P15090 132 aa1.43□□□□□ -2.18
TOPBP1-208ENST00000511439 ROMO1P60602 79 aa1.43□□□□□ -2.18
TOPBP1-208ENST00000511439 KRTAP8-1Q8IUC2 63 aa1.43□□□□□ -2.18
TOPBP1-208ENST00000511439 TMEM254Q8TBM7 123 aa1.43□□□□□ -2.18
TOPBP1-208ENST00000511439 TIMM21Q9BVV7 248 aa1.43□□□□□ -2.18
TOPBP1-208ENST00000511439 SMIM3Q9BZL3 60 aa1.43□□□□□ -2.18
TOPBP1-208ENST00000511439 SAR1AQ9NR31 198 aa1.43□□□□□ -2.18
TOPBP1-208ENST00000511439 IGKV2-40A0A087WW87 121 aaPredicted RBP1.42□□□□□ -2.18
TOPBP1-208ENST00000511439 FXYD6-FXYD2A0A087WZ82 144 aa1.42□□□□□ -2.18
TOPBP1-208ENST00000511439 hDV103S1A0JD37 113 aa1.42□□□□□ -2.18
TOPBP1-208ENST00000511439 M0R3E3 92 aa1.42□□□□□ -2.18
TOPBP1-208ENST00000511439 IGKV2D-40P01614 121 aaPredicted RBP1.42□□□□□ -2.18
TOPBP1-208ENST00000511439 MT-ND4LP03901 98 aa1.42□□□□□ -2.18
TOPBP1-208ENST00000511439 FOXA3P55318 350 aaPredicted RBP1.42□□□□□ -2.18
TOPBP1-208ENST00000511439 GNG2P59768 71 aa1.42□□□□□ -2.18
TOPBP1-208ENST00000511439 RNASE10Q5GAN6 216 aaKnown RBP1.42□□□□□ -2.18
TOPBP1-208ENST00000511439 AQP10Q96PS8 301 aa1.42□□□□□ -2.18
TOPBP1-208ENST00000511439 TPRKBQ9Y3C4 175 aa1.42□□□□□ -2.18
TOPBP1-208ENST00000511439 TRAV12-1A0A0B4J245 112 aa1.41□□□□□ -2.18
TOPBP1-208ENST00000511439 IGKV3OR2-268A0A0C4DH90 116 aa1.41□□□□□ -2.18
TOPBP1-208ENST00000511439 A0A0G2JQZ4 141 aa1.41□□□□□ -2.18
TOPBP1-208ENST00000511439 EDF1O60869 148 aaKnown RBP1.41□□□□□ -2.18
TOPBP1-208ENST00000511439 HBDP02042 147 aa1.41□□□□□ -2.18
TOPBP1-208ENST00000511439 IGLC2P0DOY2 106 aa1.41□□□□□ -2.18
TOPBP1-208ENST00000511439 FAM74A4Q5TZK3 123 aa1.41□□□□□ -2.18
TOPBP1-208ENST00000511439 C2orf82Q6UX34 121 aa1.41□□□□□ -2.18
TOPBP1-208ENST00000511439 HYLS1Q96M11 299 aa1.41□□□□□ -2.18
TOPBP1-208ENST00000511439 NAA60Q9H7X0 242 aa1.41□□□□□ -2.18
TOPBP1-208ENST00000511439 CACFD1Q9UGQ2 172 aa1.41□□□□□ -2.18
TOPBP1-208ENST00000511439 ERG28Q9UKR5 140 aa1.41□□□□□ -2.18
TOPBP1-208ENST00000511439 A0A087WSZ3 146 aa1.4□□□□□ -2.19
TOPBP1-208ENST00000511439 TRAV21A0A0B4J279 112 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms