RNA–Protein interactions for RNA: ENST00000510356.5

CALCOCO2-217, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 1 (best)

Gene CALCOCO2, Length 1,009 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-217ENST00000510356 ZNF625Q96I27 306 aaPredicted RBP4.55□□□□□ -1.68
CALCOCO2-217ENST00000510356 YPEL4Q96NS1 127 aa4.55□□□□□ -1.68
CALCOCO2-217ENST00000510356 CHTOPQ9Y3Y2 248 aaKnown RBP4.55□□□□□ -1.68
CALCOCO2-217ENST00000510356 ZNF706Q9Y5V0 76 aaPredicted RBP4.55□□□□□ -1.68
CALCOCO2-217ENST00000510356 SLC25A20O43772 301 aa4.54□□□□□ -1.68
CALCOCO2-217ENST00000510356 KRTAP10-7P60409 375 aaPredicted RBP4.54□□□□□ -1.68
CALCOCO2-217ENST00000510356 KRTAP5-11Q6L8G4 156 aa4.54□□□□□ -1.68
CALCOCO2-217ENST00000510356 FAM19A1Q7Z5A9 133 aa4.54□□□□□ -1.68
CALCOCO2-217ENST00000510356 IFI27L1Q96BM0 104 aa4.54□□□□□ -1.68
CALCOCO2-217ENST00000510356 TMEM126AQ9H061 195 aa4.54□□□□□ -1.68
CALCOCO2-217ENST00000510356 TMEM223A0PJW6 202 aa4.53□□□□□ -1.68
CALCOCO2-217ENST00000510356 SCO1O75880 301 aa4.53□□□□□ -1.68
CALCOCO2-217ENST00000510356 COX6B2Q6YFQ2 88 aa4.53□□□□□ -1.68
CALCOCO2-217ENST00000510356 CBLN2Q8IUK8 224 aa4.53□□□□□ -1.68
CALCOCO2-217ENST00000510356 Q8NBF4 154 aa4.53□□□□□ -1.68
CALCOCO2-217ENST00000510356 LINC00587B1AMM8 73 aa4.52□□□□□ -1.69
CALCOCO2-217ENST00000510356 M0R378 163 aa4.52□□□□□ -1.69
CALCOCO2-217ENST00000510356 LINC00158P58513 81 aa4.52□□□□□ -1.69
CALCOCO2-217ENST00000510356 PRLHP81277 87 aa4.52□□□□□ -1.69
CALCOCO2-217ENST00000510356 TMEM238C9JI98 176 aa4.51□□□□□ -1.69
CALCOCO2-217ENST00000510356 HSBP1O75506 76 aa4.51□□□□□ -1.69
CALCOCO2-217ENST00000510356 HERV-K104P63124 156 aa4.51□□□□□ -1.69
CALCOCO2-217ENST00000510356 Q8NDZ9 215 aa4.51□□□□□ -1.69
CALCOCO2-217ENST00000510356 ATP6V1G1O75348 118 aa4.5□□□□□ -1.69
CALCOCO2-217ENST00000510356 PCOTHQ58A44 107 aa4.5□□□□□ -1.69
CALCOCO2-217ENST00000510356 MEIG1Q5JSS6 88 aa4.5□□□□□ -1.69
CALCOCO2-217ENST00000510356 SPRR4Q96PI1 79 aa4.5□□□□□ -1.69
CALCOCO2-217ENST00000510356 MYMXA0A1B0GTQ4 84 aa4.49□□□□□ -1.69
CALCOCO2-217ENST00000510356 Q8N377 158 aa4.49□□□□□ -1.69
CALCOCO2-217ENST00000510356 HIGD2AQ9BW72 106 aa4.49□□□□□ -1.69
CALCOCO2-217ENST00000510356 MAP1LC3CQ9BXW4 147 aa4.49□□□□□ -1.69
CALCOCO2-217ENST00000510356 IGLV9-49A0A0B4J1Y8 123 aa4.48□□□□□ -1.69
CALCOCO2-217ENST00000510356 A0A0U1RRA0 63 aa4.48□□□□□ -1.69
CALCOCO2-217ENST00000510356 LEPROTL1O95214 131 aa4.48□□□□□ -1.69
CALCOCO2-217ENST00000510356 TRGC2P03986 189 aa4.48□□□□□ -1.69
CALCOCO2-217ENST00000510356 SMIM13P0DJ93 91 aa4.48□□□□□ -1.69
CALCOCO2-217ENST00000510356 PLNP26678 52 aa4.48□□□□□ -1.69
CALCOCO2-217ENST00000510356 SSBP3-AS1Q7Z2R9 100 aa4.48□□□□□ -1.69
CALCOCO2-217ENST00000510356 BOD1L2Q8IYS8 172 aa4.48□□□□□ -1.69
CALCOCO2-217ENST00000510356 MIR7-3HGQ8N6C7 128 aa4.48□□□□□ -1.69
CALCOCO2-217ENST00000510356 LITAFQ99732 161 aa4.48□□□□□ -1.69
CALCOCO2-217ENST00000510356 SERF1AO75920 110 aa4.47□□□□□ -1.69
CALCOCO2-217ENST00000510356 SPRR1AP35321 89 aa4.47□□□□□ -1.69
CALCOCO2-217ENST00000510356 KCNQ1DNQ9H478 68 aa4.47□□□□□ -1.69
CALCOCO2-217ENST00000510356 HSPB8Q9UJY1 196 aa4.47□□□□□ -1.69
CALCOCO2-217ENST00000510356 LOC107984156A0A0G2JMH3 177 aa4.46□□□□□ -1.7
CALCOCO2-217ENST00000510356 H0Y8G0 127 aa4.46□□□□□ -1.7
CALCOCO2-217ENST00000510356 NCR3O14931 201 aa4.46□□□□□ -1.7
CALCOCO2-217ENST00000510356 LEPROTO15243 131 aa4.46□□□□□ -1.7
CALCOCO2-217ENST00000510356 NMUP48645 174 aa4.46□□□□□ -1.7
CALCOCO2-217ENST00000510356 HERVK_113P61574 105 aa4.46□□□□□ -1.7
CALCOCO2-217ENST00000510356 S100A12P80511 92 aa4.46□□□□□ -1.7
CALCOCO2-217ENST00000510356 ARL17AQ8IVW1 177 aa4.46□□□□□ -1.7
CALCOCO2-217ENST00000510356 LINC00846Q9NV44 126 aa4.46□□□□□ -1.7
CALCOCO2-217ENST00000510356 TRBV10-2A0A0K0K1G8 114 aa4.45□□□□□ -1.7
CALCOCO2-217ENST00000510356 KRTAP4-16G5E9R7 235 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-217ENST00000510356 DPM2O94777 84 aa4.45□□□□□ -1.7
CALCOCO2-217ENST00000510356 TSPEAR-AS2P59090 65 aa4.45□□□□□ -1.7
CALCOCO2-217ENST00000510356 ETDCA0A1B0GVM5 59 aa4.44□□□□□ -1.7
CALCOCO2-217ENST00000510356 J3QQQ9 107 aa4.44□□□□□ -1.7
CALCOCO2-217ENST00000510356 IGKCP01834 107 aa4.44□□□□□ -1.7
CALCOCO2-217ENST00000510356 NOTCH2NLQ7Z3S9 236 aa4.44□□□□□ -1.7
CALCOCO2-217ENST00000510356 TRBV10-3A0A0K0K1G6 114 aa4.43□□□□□ -1.7
CALCOCO2-217ENST00000510356 NDUFC2O95298 119 aa4.43□□□□□ -1.7
CALCOCO2-217ENST00000510356 LGALS3P17931 250 aaKnown RBP4.43□□□□□ -1.7
CALCOCO2-217ENST00000510356 LINC00483Q53H64 154 aa4.43□□□□□ -1.7
CALCOCO2-217ENST00000510356 SMCR5Q8TEV8 140 aa4.43□□□□□ -1.7
CALCOCO2-217ENST00000510356 MIEN1Q9BRT3 115 aa4.43□□□□□ -1.7
CALCOCO2-217ENST00000510356 SPANXB1Q9NS25 103 aaPredicted RBP4.43□□□□□ -1.7
CALCOCO2-217ENST00000510356 FCGBPQ9Y6R7 5405 aaPredicted RBP4.43□□□□□ -1.7
CALCOCO2-217ENST00000510356 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
CALCOCO2-217ENST00000510356 COLCA2A8K830 154 aa4.42□□□□□ -1.7
CALCOCO2-217ENST00000510356 FABP4P15090 132 aa4.42□□□□□ -1.7
CALCOCO2-217ENST00000510356 DDTP30046 118 aa4.42□□□□□ -1.7
CALCOCO2-217ENST00000510356 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
CALCOCO2-217ENST00000510356 USH2AO75445 5202 aa4.41□□□□□ -1.7
CALCOCO2-217ENST00000510356 MOBPQ13875 183 aa4.41□□□□□ -1.7
CALCOCO2-217ENST00000510356 Q6ZRX8 168 aa4.41□□□□□ -1.7
CALCOCO2-217ENST00000510356 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.7
CALCOCO2-217ENST00000510356 E9PLD3 99 aa4.4□□□□□ -1.71
CALCOCO2-217ENST00000510356 IGLV6-57P01721 117 aa4.4□□□□□ -1.71
CALCOCO2-217ENST00000510356 S100A7L2Q5SY68 101 aa4.4□□□□□ -1.71
CALCOCO2-217ENST00000510356 SLC7A5P1Q8MH63 180 aa4.4□□□□□ -1.71
CALCOCO2-217ENST00000510356 PRAC1Q96KF2 57 aa4.4□□□□□ -1.71
CALCOCO2-217ENST00000510356 PMCHL2Q9BQD1 86 aa4.4□□□□□ -1.71
CALCOCO2-217ENST00000510356 CBY1Q9Y3M2 126 aa4.4□□□□□ -1.71
CALCOCO2-217ENST00000510356 TRAV23DV6A0A075B6W5 121 aa4.39□□□□□ -1.71
CALCOCO2-217ENST00000510356 A0A0J9YXY3 114 aa4.39□□□□□ -1.71
CALCOCO2-217ENST00000510356 JOSD1Q15040 202 aaPredicted RBP4.39□□□□□ -1.71
CALCOCO2-217ENST00000510356 Q9BRP9 147 aa4.39□□□□□ -1.71
CALCOCO2-217ENST00000510356 LIMD2Q9BT23 127 aa4.39□□□□□ -1.71
CALCOCO2-217ENST00000510356 C9orf92A6NGG3 77 aa4.38□□□□□ -1.71
CALCOCO2-217ENST00000510356 C5orf52A6NGY3 159 aa4.38□□□□□ -1.71
CALCOCO2-217ENST00000510356 SYS1-DBNDD2H3BUS1 97 aa4.38□□□□□ -1.71
CALCOCO2-217ENST00000510356 ERC2-IT1O76042 136 aa4.38□□□□□ -1.71
CALCOCO2-217ENST00000510356 SOSTDC1Q6X4U4 206 aa4.38□□□□□ -1.71
CALCOCO2-217ENST00000510356 ZNF73O43830 326 aaPredicted RBP4.37□□□□□ -1.71
CALCOCO2-217ENST00000510356 HIST1H2BKO60814 126 aa4.37□□□□□ -1.71
CALCOCO2-217ENST00000510356 TIMM17BO60830 172 aa4.37□□□□□ -1.71
CALCOCO2-217ENST00000510356 HIST1H2BJP06899 126 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms