RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 GNG4P50150 75 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 UBE2D1P51668 147 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 TPPP2P59282 170 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 CATR1Q13166 79 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 DEFB133Q30KQ1 61 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 C12orf73Q69YU5 71 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 PLAC4Q8WY50 150 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 ALMS1Q8TCU4 4167 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 VPS13BQ7Z7G8 4022 aa0.73□□□□□ -2.29
OTUD4-207ENST00000509517 A0A087WTM6 91 aa0.72□□□□□ -2.29
OTUD4-207ENST00000509517 IFNA17P01571 189 aa0.72□□□□□ -2.29
OTUD4-207ENST00000509517 PPP3R1P63098 170 aa0.72□□□□□ -2.29
OTUD4-207ENST00000509517 MRPS10P82664 201 aaKnown RBP0.72□□□□□ -2.29
OTUD4-207ENST00000509517 RBM3P98179 157 aaKnown RBP0.72□□□□□ -2.29
OTUD4-207ENST00000509517 MRPL54Q6P161 138 aaKnown RBP0.72□□□□□ -2.29
OTUD4-207ENST00000509517 C20orf197Q8N268 126 aa0.72□□□□□ -2.29
OTUD4-207ENST00000509517 BET1LQ9NYM9 111 aa0.72□□□□□ -2.29
OTUD4-207ENST00000509517 IER3IP1Q9Y5U9 82 aa0.72□□□□□ -2.29
OTUD4-207ENST00000509517 DNAH3Q8TD57 4116 aa0.71□□□□□ -2.3
OTUD4-207ENST00000509517 PKD1P98161 4303 aa0.71□□□□□ -2.3
OTUD4-207ENST00000509517 LRP1Q07954 4544 aaKnown RBP0.71□□□□□ -2.3
OTUD4-207ENST00000509517 OOSP1A8MZH6 123 aa0.71□□□□□ -2.3
OTUD4-207ENST00000509517 ATP6V1G2-DDX39BF2Z307 99 aa0.71□□□□□ -2.3
OTUD4-207ENST00000509517 SMR3BP02814 79 aaPredicted RBP0.71□□□□□ -2.3
OTUD4-207ENST00000509517 CCL8P80075 99 aa0.71□□□□□ -2.3
OTUD4-207ENST00000509517 ZNF818PQ6ZRF7 136 aa0.71□□□□□ -2.3
OTUD4-207ENST00000509517 WFDC9Q8NEX5 89 aa0.71□□□□□ -2.3
OTUD4-207ENST00000509517 COX7B2Q8TF08 81 aa0.71□□□□□ -2.3
OTUD4-207ENST00000509517 C14orf144Q96I85 54 aa0.71□□□□□ -2.3
OTUD4-207ENST00000509517 DSCR8Q96T75 97 aa0.71□□□□□ -2.3
OTUD4-207ENST00000509517 C12orf57Q99622 126 aa0.71□□□□□ -2.3
OTUD4-207ENST00000509517 TMEM14BQ9NUH8 114 aa0.71□□□□□ -2.3
OTUD4-207ENST00000509517 COA4Q9NYJ1 87 aa0.71□□□□□ -2.3
OTUD4-207ENST00000509517 DNAH2Q9P225 4427 aa0.7□□□□□ -2.3
OTUD4-207ENST00000509517 DNAH6Q9C0G6 4158 aa0.7□□□□□ -2.3
OTUD4-207ENST00000509517 TRAV13-2A0A0B4J235 113 aa0.7□□□□□ -2.3
OTUD4-207ENST00000509517 HCG22E2RYF7 251 aa0.7□□□□□ -2.3
OTUD4-207ENST00000509517 SIX6O95475 246 aa0.7□□□□□ -2.3
OTUD4-207ENST00000509517 SSBP1Q04837 148 aaKnown RBP0.7□□□□□ -2.3
OTUD4-207ENST00000509517 C9orf153Q5TBE3 101 aa0.7□□□□□ -2.3
OTUD4-207ENST00000509517 PPP1R1CQ8WVI7 109 aa0.7□□□□□ -2.3
OTUD4-207ENST00000509517 PPP3R2Q96LZ3 170 aa0.7□□□□□ -2.3
OTUD4-207ENST00000509517 LINC00312Q9Y6C7 94 aa0.7□□□□□ -2.3
OTUD4-207ENST00000509517 ANKRD36A6QL64 1941 aa0.7□□□□□ -2.3
OTUD4-207ENST00000509517 DNAH5Q8TE73 4624 aa0.69□□□□□ -2.3
OTUD4-207ENST00000509517 TRBV7-1A0A0A6YYK4 115 aa0.69□□□□□ -2.3
OTUD4-207ENST00000509517 SPTY2D1-AS1A0A0U1RR47 76 aa0.69□□□□□ -2.3
OTUD4-207ENST00000509517 C20orf202A1L168 122 aa0.69□□□□□ -2.3
OTUD4-207ENST00000509517 RBAKDNA6NC62 111 aa0.69□□□□□ -2.3
OTUD4-207ENST00000509517 C10orf142B7Z368 130 aa0.69□□□□□ -2.3
OTUD4-207ENST00000509517 RPL37P61927 97 aaKnown RBP0.69□□□□□ -2.3
OTUD4-207ENST00000509517 SPINK13Q1W4C9 94 aa0.69□□□□□ -2.3
OTUD4-207ENST00000509517 C5orf38Q86SI9 138 aa0.69□□□□□ -2.3
OTUD4-207ENST00000509517 C8orf59Q8N0T1 100 aaPredicted RBP0.69□□□□□ -2.3
OTUD4-207ENST00000509517 C4orf33Q8N1A6 199 aa0.69□□□□□ -2.3
OTUD4-207ENST00000509517 TCEAL7Q9BRU2 100 aa0.69□□□□□ -2.3
OTUD4-207ENST00000509517 SPANXDQ9BXN6 97 aa0.69□□□□□ -2.3
OTUD4-207ENST00000509517 MUC5BQ9HC84 5762 aaPredicted RBP0.68□□□□□ -2.3
OTUD4-207ENST00000509517 PIGBOS1A0A0B4J2F0 54 aa0.68□□□□□ -2.3
OTUD4-207ENST00000509517 DEFB108AA8MXU0 73 aa0.68□□□□□ -2.3
OTUD4-207ENST00000509517 LYNX1G3V0Z9 82 aa0.68□□□□□ -2.3
OTUD4-207ENST00000509517 PRB3Q04118 309 aaPredicted RBP0.68□□□□□ -2.3
OTUD4-207ENST00000509517 FAM74A4Q5TZK3 123 aa0.68□□□□□ -2.3
OTUD4-207ENST00000509517 Q96NJ1 140 aa0.68□□□□□ -2.3
OTUD4-207ENST00000509517 V9GYV3 84 aa0.68□□□□□ -2.3
OTUD4-207ENST00000509517 DNAH17Q9UFH2 4485 aa0.67□□□□□ -2.3
OTUD4-207ENST00000509517 SPINT3P49223 89 aa0.67□□□□□ -2.3
OTUD4-207ENST00000509517 RBP2P50120 134 aa0.67□□□□□ -2.3
OTUD4-207ENST00000509517 EDDM3BP56851 147 aa0.67□□□□□ -2.3
OTUD4-207ENST00000509517 HSD52Q0P140 79 aa0.67□□□□□ -2.3
OTUD4-207ENST00000509517 COMMD6Q7Z4G1 85 aa0.67□□□□□ -2.3
OTUD4-207ENST00000509517 VPS13DQ5THJ4 4388 aa0.66□□□□□ -2.3
OTUD4-207ENST00000509517 IFITM1P13164 125 aa0.66□□□□□ -2.3
OTUD4-207ENST00000509517 HMGA1P17096 107 aaKnown RBP0.66□□□□□ -2.3
OTUD4-207ENST00000509517 GTF2H5Q6ZYL4 71 aa0.66□□□□□ -2.3
OTUD4-207ENST00000509517 SVBPQ8N300 66 aa0.66□□□□□ -2.3
OTUD4-207ENST00000509517 DPH3P1Q9H4G8 78 aa0.66□□□□□ -2.3
OTUD4-207ENST00000509517 LINC00474Q9P2X8 69 aa0.66□□□□□ -2.3
OTUD4-207ENST00000509517 FAM24AA6NFZ4 105 aa0.65□□□□□ -2.31
OTUD4-207ENST00000509517 SSSCA1O60232 199 aa0.65□□□□□ -2.31
OTUD4-207ENST00000509517 UQCRHP07919 91 aa0.65□□□□□ -2.31
OTUD4-207ENST00000509517 SPINK8P0C7L1 97 aa0.65□□□□□ -2.31
OTUD4-207ENST00000509517 MT1HL1P0DM35 61 aa0.65□□□□□ -2.31
OTUD4-207ENST00000509517 ZNF137PP52743 207 aa0.65□□□□□ -2.31
OTUD4-207ENST00000509517 KRTAP19-6Q3LI70 58 aa0.65□□□□□ -2.31
OTUD4-207ENST00000509517 SPINK9Q5DT21 86 aa0.65□□□□□ -2.31
OTUD4-207ENST00000509517 C10orf128Q5T292 105 aa0.65□□□□□ -2.31
OTUD4-207ENST00000509517 TTC9CQ8N5M4 171 aa0.65□□□□□ -2.31
OTUD4-207ENST00000509517 AQP10Q96PS8 301 aa0.65□□□□□ -2.31
OTUD4-207ENST00000509517 WFDC6Q9BQY6 131 aa0.65□□□□□ -2.31
OTUD4-207ENST00000509517 CYP4F30PQ9H0H9 118 aa0.65□□□□□ -2.31
OTUD4-207ENST00000509517 FAIMQ9NVQ4 179 aa0.65□□□□□ -2.31
OTUD4-207ENST00000509517 TRGV1A0A0A0MS02 117 aa0.64□□□□□ -2.31
OTUD4-207ENST00000509517 A0A0D9SG42 100 aa0.64□□□□□ -2.31
OTUD4-207ENST00000509517 UBE2L5PA0A1B0GUS4 154 aa0.64□□□□□ -2.31
OTUD4-207ENST00000509517 SMIM6P0DI80 62 aa0.64□□□□□ -2.31
OTUD4-207ENST00000509517 SPRR2EP22531 72 aa0.64□□□□□ -2.31
OTUD4-207ENST00000509517 SPRR2BP35325 72 aa0.64□□□□□ -2.31
OTUD4-207ENST00000509517 SPRR2AP35326 72 aa0.64□□□□□ -2.31
OTUD4-207ENST00000509517 ATP5EP56381 51 aaPredicted RBP0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms