RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 ANKRD39Q53RE8 183 aa9.42□□□□□ -0.9
PDLIM5-212ENST00000509333 S100A12P80511 92 aa9.41□□□□□ -0.9
PDLIM5-212ENST00000509333 HIST3H2BBQ8N257 126 aa9.41□□□□□ -0.9
PDLIM5-212ENST00000509333 C20orf202A1L168 122 aa9.4□□□□□ -0.9
PDLIM5-212ENST00000509333 S100A7L2Q5SY68 101 aa9.4□□□□□ -0.9
PDLIM5-212ENST00000509333 C4orf48Q5BLP8 95 aa9.39□□□□□ -0.91
PDLIM5-212ENST00000509333 ATOH7Q8N100 152 aa9.39□□□□□ -0.91
PDLIM5-212ENST00000509333 ERC2-IT1O76042 136 aa9.38□□□□□ -0.91
PDLIM5-212ENST00000509333 C3orf22Q8N5N4 141 aa9.38□□□□□ -0.91
PDLIM5-212ENST00000509333 HIST1H2BLQ99880 126 aa9.38□□□□□ -0.91
PDLIM5-212ENST00000509333 AKR1D1P51857 326 aa9.37□□□□□ -0.91
PDLIM5-212ENST00000509333 Q9BRP9 147 aa9.37□□□□□ -0.91
PDLIM5-212ENST00000509333 SPANXCQ9NY87 97 aa9.37□□□□□ -0.91
PDLIM5-212ENST00000509333 ZNF706Q9Y5V0 76 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-212ENST00000509333 LINC00304Q8N9R0 145 aa9.36□□□□□ -0.91
PDLIM5-212ENST00000509333 TRAV23DV6A0A075B6W5 121 aa9.35□□□□□ -0.91
PDLIM5-212ENST00000509333 PRR4Q16378 134 aa9.35□□□□□ -0.91
PDLIM5-212ENST00000509333 Q6ZRX8 168 aa9.35□□□□□ -0.91
PDLIM5-212ENST00000509333 PCP2Q8IVA1 136 aa9.35□□□□□ -0.91
PDLIM5-212ENST00000509333 ZNF73O43830 326 aaPredicted RBP9.34□□□□□ -0.91
PDLIM5-212ENST00000509333 S100A2P29034 98 aa9.34□□□□□ -0.91
PDLIM5-212ENST00000509333 SNRPEP62304 92 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-212ENST00000509333 LINC00483Q53H64 154 aa9.34□□□□□ -0.91
PDLIM5-212ENST00000509333 PPDPFQ9H3Y8 114 aa9.34□□□□□ -0.91
PDLIM5-212ENST00000509333 CTAG1AP78358 180 aa9.33□□□□□ -0.92
PDLIM5-212ENST00000509333 SCGB1D4Q6XE38 83 aa9.33□□□□□ -0.92
PDLIM5-212ENST00000509333 LINC00518Q8N0U6 118 aa9.33□□□□□ -0.92
PDLIM5-212ENST00000509333 SPANXDQ9BXN6 97 aa9.33□□□□□ -0.92
PDLIM5-212ENST00000509333 RNF213Q63HN8 5207 aa9.32□□□□□ -0.92
PDLIM5-212ENST00000509333 S100A6P06703 90 aa9.32□□□□□ -0.92
PDLIM5-212ENST00000509333 GAGE2AQ6NT46 116 aa9.32□□□□□ -0.92
PDLIM5-212ENST00000509333 OR13C6PQ8NH95 151 aa9.32□□□□□ -0.92
PDLIM5-212ENST00000509333 CBY1Q9Y3M2 126 aa9.31□□□□□ -0.92
PDLIM5-212ENST00000509333 IFITM1P13164 125 aa9.3□□□□□ -0.92
PDLIM5-212ENST00000509333 JOSD1Q15040 202 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-212ENST00000509333 Q6ZVH6 145 aa9.3□□□□□ -0.92
PDLIM5-212ENST00000509333 MUSTN1Q8IVN3 82 aa9.3□□□□□ -0.92
PDLIM5-212ENST00000509333 SPAG11AQ6PDA7 123 aa9.29□□□□□ -0.92
PDLIM5-212ENST00000509333 C5orf52A6NGY3 159 aa9.28□□□□□ -0.92
PDLIM5-212ENST00000509333 HINT1P49773 126 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-212ENST00000509333 SSBP3-AS1Q7Z2R9 100 aa9.26□□□□□ -0.93
PDLIM5-212ENST00000509333 Q8NBF4 154 aa9.26□□□□□ -0.93
PDLIM5-212ENST00000509333 COPS9Q8WXC6 57 aa9.26□□□□□ -0.93
PDLIM5-212ENST00000509333 ST20-AS1Q8NBB2 130 aa9.25□□□□□ -0.93
PDLIM5-212ENST00000509333 RETNLBQ9BQ08 111 aa9.25□□□□□ -0.93
PDLIM5-212ENST00000509333 HSBP1L1C9JCN9 74 aa9.23□□□□□ -0.93
PDLIM5-212ENST00000509333 C6orf99Q4VX62 202 aa9.23□□□□□ -0.93
PDLIM5-212ENST00000509333 SCGB1D1O95968 90 aa9.22□□□□□ -0.93
PDLIM5-212ENST00000509333 DHRS4-AS1Q9P1J3 65 aa9.22□□□□□ -0.93
PDLIM5-212ENST00000509333 IGLV9-49A0A0B4J1Y8 123 aa9.21□□□□□ -0.94
PDLIM5-212ENST00000509333 TRBV7-6A0A0J9YX20 115 aa9.21□□□□□ -0.94
PDLIM5-212ENST00000509333 LOC100996750A0A140TA64 210 aa9.21□□□□□ -0.94
PDLIM5-212ENST00000509333 A6NDN8 102 aa9.21□□□□□ -0.94
PDLIM5-212ENST00000509333 COX7BP24311 80 aa9.21□□□□□ -0.94
PDLIM5-212ENST00000509333 ELOF1P60002 83 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-212ENST00000509333 KRTAP4-6Q9BYQ5 205 aa9.21□□□□□ -0.94
PDLIM5-212ENST00000509333 SPINK1P00995 79 aa9.2□□□□□ -0.94
PDLIM5-212ENST00000509333 SPRR1BP22528 89 aa9.2□□□□□ -0.94
PDLIM5-212ENST00000509333 MOBPQ13875 183 aa9.2□□□□□ -0.94
PDLIM5-212ENST00000509333 IGLV7-46A0A075B6I9 117 aa9.19□□□□□ -0.94
PDLIM5-212ENST00000509333 TRAV13-2A0A0B4J235 113 aa9.17□□□□□ -0.94
PDLIM5-212ENST00000509333 A0A1B0GWB2 263 aa9.15□□□□□ -0.94
PDLIM5-212ENST00000509333 SMIM11BQ8TCY0 68 aa9.15□□□□□ -0.94
PDLIM5-212ENST00000509333 A4D1N5 150 aa9.14□□□□□ -0.95
PDLIM5-212ENST00000509333 COX8AP10176 69 aa9.14□□□□□ -0.95
PDLIM5-212ENST00000509333 DLEU1O43261 78 aa9.13□□□□□ -0.95
PDLIM5-212ENST00000509333 RPS29P62273 56 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-212ENST00000509333 TAL2Q16559 108 aa9.13□□□□□ -0.95
PDLIM5-212ENST00000509333 TPRXLQ17RH7 258 aa9.13□□□□□ -0.95
PDLIM5-212ENST00000509333 FP248Q71RG6 208 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-212ENST00000509333 TEX49A0A1B0GTD5 131 aa9.11□□□□□ -0.95
PDLIM5-212ENST00000509333 LINC01547P58512 204 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-212ENST00000509333 C9orf153Q5TBE3 101 aa9.11□□□□□ -0.95
PDLIM5-212ENST00000509333 SLC25A34Q6PIV7 304 aa9.11□□□□□ -0.95
PDLIM5-212ENST00000509333 DEFB105AQ8NG35 78 aa9.11□□□□□ -0.95
PDLIM5-212ENST00000509333 LAMTOR3Q9UHA4 124 aa9.11□□□□□ -0.95
PDLIM5-212ENST00000509333 SMIM29Q86T20 159 aa9.1□□□□□ -0.95
PDLIM5-212ENST00000509333 Q8N377 158 aa9.1□□□□□ -0.95
PDLIM5-212ENST00000509333 C14orf144Q96I85 54 aa9.09□□□□□ -0.95
PDLIM5-212ENST00000509333 MUC2Q02817 5179 aa9.08□□□□□ -0.96
PDLIM5-212ENST00000509333 IGLV5-48A0A075B6I7 105 aa9.08□□□□□ -0.96
PDLIM5-212ENST00000509333 HIST1H4GQ99525 98 aa9.08□□□□□ -0.96
PDLIM5-212ENST00000509333 CDIP1Q9H305 208 aa9.08□□□□□ -0.96
PDLIM5-212ENST00000509333 MUC17Q685J3 4493 aa9.07□□□□□ -0.96
PDLIM5-212ENST00000509333 SLC25A20O43772 301 aa9.07□□□□□ -0.96
PDLIM5-212ENST00000509333 VAMP3Q15836 100 aa9.06□□□□□ -0.96
PDLIM5-212ENST00000509333 PAM16Q9Y3D7 125 aa9.06□□□□□ -0.96
PDLIM5-212ENST00000509333 Q1RN00 199 aa9.05□□□□□ -0.96
PDLIM5-212ENST00000509333 KRTAP13-3Q3SY46 172 aa9.05□□□□□ -0.96
PDLIM5-212ENST00000509333 SPATA45Q537H7 98 aa9.05□□□□□ -0.96
PDLIM5-212ENST00000509333 LINC00575Q6W349 94 aa9.05□□□□□ -0.96
PDLIM5-212ENST00000509333 HIGD1BQ9P298 99 aa9.05□□□□□ -0.96
PDLIM5-212ENST00000509333 NHP2Q9NX24 153 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-212ENST00000509333 HRCT1Q6UXD1 115 aa9.02□□□□□ -0.97
PDLIM5-212ENST00000509333 C12orf57Q99622 126 aa9.02□□□□□ -0.97
PDLIM5-212ENST00000509333 VAMP8Q9BV40 100 aa9.02□□□□□ -0.97
PDLIM5-212ENST00000509333 PRO1933Q9H354 126 aa9.02□□□□□ -0.97
PDLIM5-212ENST00000509333 CFC1BP0CG36 223 aa9.01□□□□□ -0.97
PDLIM5-212ENST00000509333 CFC1P0CG37 223 aa9.01□□□□□ -0.97
PDLIM5-212ENST00000509333 CD164Q04900 197 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms