RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 M0R378 163 aa7.3□□□□□ -1.24
SH3RF1-203ENST00000508685 CXCL6P80162 114 aa7.3□□□□□ -1.24
SH3RF1-203ENST00000508685 B9D2Q9BPU9 175 aa7.3□□□□□ -1.24
SH3RF1-203ENST00000508685 ELOF1P60002 83 aaKnown RBP7.29□□□□□ -1.24
SH3RF1-203ENST00000508685 KRTAP26-1Q6PEX3 210 aa7.29□□□□□ -1.24
SH3RF1-203ENST00000508685 CAMK2N2Q96S95 79 aa7.29□□□□□ -1.24
SH3RF1-203ENST00000508685 LINC00588Q9Y4M8 146 aa7.29□□□□□ -1.24
SH3RF1-203ENST00000508685 DNAH7Q8WXX0 4024 aa7.28□□□□□ -1.24
SH3RF1-203ENST00000508685 LINC01547P58512 204 aaPredicted RBP7.27□□□□□ -1.25
SH3RF1-203ENST00000508685 HIGD2BQ4VC39 106 aa7.27□□□□□ -1.25
SH3RF1-203ENST00000508685 FAM19A1Q7Z5A9 133 aa7.27□□□□□ -1.25
SH3RF1-203ENST00000508685 DNAH1Q9P2D7 4330 aa7.27□□□□□ -1.25
SH3RF1-203ENST00000508685 TRBV7-4A0A0J9YYF1 115 aa7.27□□□□□ -1.25
SH3RF1-203ENST00000508685 DNAH10OSP0CZ25 163 aa7.27□□□□□ -1.25
SH3RF1-203ENST00000508685 VPREB1P12018 145 aa7.27□□□□□ -1.25
SH3RF1-203ENST00000508685 Q6ZVQ6 151 aa7.27□□□□□ -1.25
SH3RF1-203ENST00000508685 IGKV2D-24A0A075B6R9 120 aa7.26□□□□□ -1.25
SH3RF1-203ENST00000508685 LOC107984640A0A0U1RRK4 108 aa7.26□□□□□ -1.25
SH3RF1-203ENST00000508685 C1orf43Q9BWL3 253 aa7.26□□□□□ -1.25
SH3RF1-203ENST00000508685 XAGE1AQ9HD64 81 aa7.26□□□□□ -1.25
SH3RF1-203ENST00000508685 TRAV7A0A075B6U4 112 aa7.25□□□□□ -1.25
SH3RF1-203ENST00000508685 C15orf56Q8N910 161 aa7.25□□□□□ -1.25
SH3RF1-203ENST00000508685 HAMPP81172 84 aa7.25□□□□□ -1.25
SH3RF1-203ENST00000508685 DPH3Q96FX2 82 aa7.24□□□□□ -1.25
SH3RF1-203ENST00000508685 LINC00528Q8N1L1 170 aa7.23□□□□□ -1.25
SH3RF1-203ENST00000508685 Q6ZRU5 148 aa7.22□□□□□ -1.25
SH3RF1-203ENST00000508685 DNAH10Q8IVF4 4471 aa7.21□□□□□ -1.25
SH3RF1-203ENST00000508685 CYSTM1Q9H1C7 97 aa7.21□□□□□ -1.26
SH3RF1-203ENST00000508685 DYNC2H1Q8NCM8 4307 aaKnown RBP7.2□□□□□ -1.26
SH3RF1-203ENST00000508685 A0A1B0GW54 56 aa7.2□□□□□ -1.26
SH3RF1-203ENST00000508685 M0R2N4 97 aa7.2□□□□□ -1.26
SH3RF1-203ENST00000508685 SYCNQ0VAF6 134 aa7.2□□□□□ -1.26
SH3RF1-203ENST00000508685 CASC10Q5T4H9 136 aa7.2□□□□□ -1.26
SH3RF1-203ENST00000508685 FAM19A5Q7Z5A7 132 aaPredicted RBP7.19□□□□□ -1.26
SH3RF1-203ENST00000508685 PLECQ15149 4684 aaKnown RBP7.19□□□□□ -1.26
SH3RF1-203ENST00000508685 C20orf197Q8N268 126 aa7.18□□□□□ -1.26
SH3RF1-203ENST00000508685 KCNQ1DNQ9H478 68 aa7.18□□□□□ -1.26
SH3RF1-203ENST00000508685 PLA2G2DQ9UNK4 145 aa7.18□□□□□ -1.26
SH3RF1-203ENST00000508685 TLX1NBP0CAT3 122 aa7.18□□□□□ -1.26
SH3RF1-203ENST00000508685 KLKP1Q107X0 134 aa7.18□□□□□ -1.26
SH3RF1-203ENST00000508685 STARD9Q9P2P6 4700 aa7.18□□□□□ -1.26
SH3RF1-203ENST00000508685 NDUFC1O43677 76 aa7.17□□□□□ -1.26
SH3RF1-203ENST00000508685 NKAPP1Q8N9T2 125 aa7.17□□□□□ -1.26
SH3RF1-203ENST00000508685 KRTAP1-5Q9BYS1 174 aa7.17□□□□□ -1.26
SH3RF1-203ENST00000508685 Q6ZRP5 223 aa7.16□□□□□ -1.26
SH3RF1-203ENST00000508685 DHRS4-AS1Q9P1J3 65 aa7.16□□□□□ -1.26
SH3RF1-203ENST00000508685 APLNQ9ULZ1 77 aa7.16□□□□□ -1.26
SH3RF1-203ENST00000508685 WWC2-AS2Q96NR7 200 aa7.15□□□□□ -1.26
SH3RF1-203ENST00000508685 FAM236DA0A1B0GTK5 79 aa7.15□□□□□ -1.27
SH3RF1-203ENST00000508685 ERC2-IT1O76042 136 aa7.15□□□□□ -1.27
SH3RF1-203ENST00000508685 FAM236CP0DP71 79 aa7.15□□□□□ -1.27
SH3RF1-203ENST00000508685 NREPQ16612 68 aa7.14□□□□□ -1.27
SH3RF1-203ENST00000508685 IGLV5-37A0A075B6J1 123 aa7.13□□□□□ -1.27
SH3RF1-203ENST00000508685 UBE2DNLQ8IWF7 75 aa7.13□□□□□ -1.27
SH3RF1-203ENST00000508685 IGLV5-48A0A075B6I7 105 aa7.13□□□□□ -1.27
SH3RF1-203ENST00000508685 PRYO14603 147 aa7.13□□□□□ -1.27
SH3RF1-203ENST00000508685 H7BZZ5 65 aa7.12□□□□□ -1.27
SH3RF1-203ENST00000508685 C5orf47Q569G3 176 aa7.12□□□□□ -1.27
SH3RF1-203ENST00000508685 C7orf33Q8WU49 177 aa7.12□□□□□ -1.27
SH3RF1-203ENST00000508685 RMI2Q96E14 147 aa7.12□□□□□ -1.27
SH3RF1-203ENST00000508685 ATP5EP56381 51 aaPredicted RBP7.11□□□□□ -1.27
SH3RF1-203ENST00000508685 SERP1Q9Y6X1 66 aa7.11□□□□□ -1.27
SH3RF1-203ENST00000508685 BPY2O14599 106 aa7.1□□□□□ -1.27
SH3RF1-203ENST00000508685 FUSP35637 526 aaKnown RBP eCLIP7.1□□□□□ -1.27
SH3RF1-203ENST00000508685 Q6ZRX8 168 aa7.1□□□□□ -1.27
SH3RF1-203ENST00000508685 NUPR2A6NF83 97 aa7.09□□□□□ -1.27
SH3RF1-203ENST00000508685 Q8N377 158 aa7.09□□□□□ -1.27
SH3RF1-203ENST00000508685 EPM2AB3EWF7 344 aa7.08□□□□□ -1.28
SH3RF1-203ENST00000508685 SPRR1AP35321 89 aa7.08□□□□□ -1.28
SH3RF1-203ENST00000508685 SERTAD4-AS1Q5TG53 156 aa7.08□□□□□ -1.28
SH3RF1-203ENST00000508685 IGLV1-50A0A075B6I6 118 aa7.08□□□□□ -1.28
SH3RF1-203ENST00000508685 ETDCA0A1B0GVM5 59 aa7.08□□□□□ -1.28
SH3RF1-203ENST00000508685 SCXQ7RTU7 201 aa7.08□□□□□ -1.28
SH3RF1-203ENST00000508685 KRTAP4-16G5E9R7 235 aaPredicted RBP7.07□□□□□ -1.28
SH3RF1-203ENST00000508685 C3orf84H3BNL1 204 aa7.07□□□□□ -1.28
SH3RF1-203ENST00000508685 IGKV4-1P06312 121 aa7.07□□□□□ -1.28
SH3RF1-203ENST00000508685 KMT2AQ03164 3969 aa7.07□□□□□ -1.28
SH3RF1-203ENST00000508685 PSCAO43653 123 aa7.06□□□□□ -1.28
SH3RF1-203ENST00000508685 OXTP01178 125 aa7.06□□□□□ -1.28
SH3RF1-203ENST00000508685 DEFB105AQ8NG35 78 aa7.06□□□□□ -1.28
SH3RF1-203ENST00000508685 FAM168BA1KXE4 195 aa7.05□□□□□ -1.28
SH3RF1-203ENST00000508685 F8WEM9 126 aa7.05□□□□□ -1.28
SH3RF1-203ENST00000508685 TMEM254Q8TBM7 123 aa7.05□□□□□ -1.28
SH3RF1-203ENST00000508685 SNURFQ9Y675 71 aa7.05□□□□□ -1.28
SH3RF1-203ENST00000508685 TNP2Q05952 138 aa7.04□□□□□ -1.28
SH3RF1-203ENST00000508685 C1orf137Q5JT78 98 aa7.03□□□□□ -1.28
SH3RF1-203ENST00000508685 OCR1Q9BZK8 76 aa7.03□□□□□ -1.28
SH3RF1-203ENST00000508685 VPS13DQ5THJ4 4388 aa7.03□□□□□ -1.28
SH3RF1-203ENST00000508685 NBDYA0A0U1RRE5 68 aa7.03□□□□□ -1.28
SH3RF1-203ENST00000508685 Q5XG85 94 aa7.03□□□□□ -1.28
SH3RF1-203ENST00000508685 MRPL55Q7Z7F7 128 aaKnown RBP7.03□□□□□ -1.28
SH3RF1-203ENST00000508685 Q8NBF4 154 aa7.03□□□□□ -1.28
SH3RF1-203ENST00000508685 SPRR4Q96PI1 79 aa7.03□□□□□ -1.28
SH3RF1-203ENST00000508685 SMIM26A0A096LP01 95 aa7.02□□□□□ -1.29
SH3RF1-203ENST00000508685 Q9BRP9 147 aa7.02□□□□□ -1.29
SH3RF1-203ENST00000508685 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.01□□□□□ -1.29
SH3RF1-203ENST00000508685 KRTAP7-1Q8IUC3 87 aa7.01□□□□□ -1.29
SH3RF1-203ENST00000508685 A0A1W2PNM2 257 aa7.01□□□□□ -1.29
SH3RF1-203ENST00000508685 RPL37AP8A6NKH3 93 aa7.01□□□□□ -1.29
SH3RF1-203ENST00000508685 A0A0U1RQV1 116 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms