RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 MUSTN1Q8IVN3 82 aa9.62□□□□□ -0.87
LMNA-222ENST00000508500 ARL17AQ8IVW1 177 aa9.62□□□□□ -0.87
LMNA-222ENST00000508500 A0A1B0GWB2 263 aa9.61□□□□□ -0.87
LMNA-222ENST00000508500 GAGE10A6NGK3 116 aa9.61□□□□□ -0.87
LMNA-222ENST00000508500 BCE1O60756 84 aa9.61□□□□□ -0.87
LMNA-222ENST00000508500 FXYD2P54710 66 aa9.61□□□□□ -0.87
LMNA-222ENST00000508500 BATFQ16520 125 aa9.61□□□□□ -0.87
LMNA-222ENST00000508500 LINC00308Q8TCZ7 52 aa9.61□□□□□ -0.87
LMNA-222ENST00000508500 A0A087X002 238 aa9.6□□□□□ -0.87
LMNA-222ENST00000508500 RPL13AP40429 203 aaKnown RBP9.59□□□□□ -0.87
LMNA-222ENST00000508500 MIR7-3HGQ8N6C7 128 aa9.59□□□□□ -0.87
LMNA-222ENST00000508500 A0A0B4J2C4 111 aa9.58□□□□□ -0.88
LMNA-222ENST00000508500 PFN2P35080 140 aa9.58□□□□□ -0.88
LMNA-222ENST00000508500 KRTAP13-1Q8IUC0 172 aa9.58□□□□□ -0.88
LMNA-222ENST00000508500 A4D1N5 150 aa9.57□□□□□ -0.88
LMNA-222ENST00000508500 RPL28P46779 137 aaKnown RBP9.57□□□□□ -0.88
LMNA-222ENST00000508500 NHP2Q9NX24 153 aaKnown RBP9.57□□□□□ -0.88
LMNA-222ENST00000508500 Q8NDZ9 215 aa9.56□□□□□ -0.88
LMNA-222ENST00000508500 ANAPC11Q9NYG5 84 aa9.56□□□□□ -0.88
LMNA-222ENST00000508500 A0A0U1RRA0 63 aa9.55□□□□□ -0.88
LMNA-222ENST00000508500 NDUFC2O95298 119 aa9.55□□□□□ -0.88
LMNA-222ENST00000508500 DAND5Q8N907 189 aa9.55□□□□□ -0.88
LMNA-222ENST00000508500 VPREB1P12018 145 aa9.54□□□□□ -0.88
LMNA-222ENST00000508500 SND1-IT1Q9HBX3 110 aa9.54□□□□□ -0.88
LMNA-222ENST00000508500 IGKV2-28A0A075B6P5 120 aa9.53□□□□□ -0.88
LMNA-222ENST00000508500 IGKV2D-28P01615 120 aa9.53□□□□□ -0.88
LMNA-222ENST00000508500 CFC1BP0CG36 223 aa9.53□□□□□ -0.88
LMNA-222ENST00000508500 CFC1P0CG37 223 aa9.53□□□□□ -0.88
LMNA-222ENST00000508500 SOSTDC1Q6X4U4 206 aa9.53□□□□□ -0.88
LMNA-222ENST00000508500 NKAPP1Q8N9T2 125 aa9.53□□□□□ -0.88
LMNA-222ENST00000508500 RAB37Q96AX2 223 aa9.53□□□□□ -0.88
LMNA-222ENST00000508500 PRO1854Q9UHT4 67 aa9.53□□□□□ -0.88
LMNA-222ENST00000508500 TAX1BP3O14907 124 aa9.52□□□□□ -0.89
LMNA-222ENST00000508500 TSPAN13O95857 204 aa9.52□□□□□ -0.89
LMNA-222ENST00000508500 KRTAP13-2Q52LG2 175 aa9.52□□□□□ -0.89
LMNA-222ENST00000508500 PRR4Q16378 134 aa9.51□□□□□ -0.89
LMNA-222ENST00000508500 TRAV13-2A0A0B4J235 113 aa9.5□□□□□ -0.89
LMNA-222ENST00000508500 C9orf118A6NHY6 69 aa9.5□□□□□ -0.89
LMNA-222ENST00000508500 CRYGAP11844 174 aa9.5□□□□□ -0.89
LMNA-222ENST00000508500 NPC2P61916 151 aa9.5□□□□□ -0.89
LMNA-222ENST00000508500 UBE2AP49459 152 aa9.49□□□□□ -0.89
LMNA-222ENST00000508500 PRLHP81277 87 aa9.49□□□□□ -0.89
LMNA-222ENST00000508500 TYMSOSQ8TAI1 123 aa9.49□□□□□ -0.89
LMNA-222ENST00000508500 MUC2Q02817 5179 aa9.48□□□□□ -0.89
LMNA-222ENST00000508500 EIF4EBP3O60516 100 aaPredicted RBP9.48□□□□□ -0.89
LMNA-222ENST00000508500 TMEM126AQ9H061 195 aa9.48□□□□□ -0.89
LMNA-222ENST00000508500 TRBV10-2A0A0K0K1G8 114 aa9.47□□□□□ -0.89
LMNA-222ENST00000508500 M0R378 163 aa9.47□□□□□ -0.89
LMNA-222ENST00000508500 K7ERJ3 54 aa9.45□□□□□ -0.9
LMNA-222ENST00000508500 LYRM7Q5U5X0 104 aa9.45□□□□□ -0.9
LMNA-222ENST00000508500 FAM229BQ4G0N7 80 aa9.44□□□□□ -0.9
LMNA-222ENST00000508500 FAM19A1Q7Z5A9 133 aa9.44□□□□□ -0.9
LMNA-222ENST00000508500 CBY1Q9Y3M2 126 aa9.44□□□□□ -0.9
LMNA-222ENST00000508500 H3BUT2 72 aa9.42□□□□□ -0.9
LMNA-222ENST00000508500 A0A1W2PPM0 123 aa9.41□□□□□ -0.9
LMNA-222ENST00000508500 COX6CP09669 75 aa9.41□□□□□ -0.9
LMNA-222ENST00000508500 LINC00337Q8N6G1 96 aa9.41□□□□□ -0.9
LMNA-222ENST00000508500 FABP2P12104 132 aa9.4□□□□□ -0.9
LMNA-222ENST00000508500 Q1RN00 199 aa9.4□□□□□ -0.9
LMNA-222ENST00000508500 LINC00304Q8N9R0 145 aa9.39□□□□□ -0.91
LMNA-222ENST00000508500 RETNLBQ9BQ08 111 aa9.39□□□□□ -0.91
LMNA-222ENST00000508500 A0A1B0GV90 55 aa9.38□□□□□ -0.91
LMNA-222ENST00000508500 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
LMNA-222ENST00000508500 C3orf22Q8N5N4 141 aa9.38□□□□□ -0.91
LMNA-222ENST00000508500 KRTAP9-2Q9BYQ4 174 aa9.38□□□□□ -0.91
LMNA-222ENST00000508500 MUC17Q685J3 4493 aa9.37□□□□□ -0.91
LMNA-222ENST00000508500 TRBV20-1A0A075B6N2 111 aa9.37□□□□□ -0.91
LMNA-222ENST00000508500 PSMB2P49721 201 aa9.37□□□□□ -0.91
LMNA-222ENST00000508500 S100A7L2Q5SY68 101 aa9.37□□□□□ -0.91
LMNA-222ENST00000508500 OR13C6PQ8NH95 151 aa9.37□□□□□ -0.91
LMNA-222ENST00000508500 IGLV6-57P01721 117 aa9.36□□□□□ -0.91
LMNA-222ENST00000508500 VAMP3Q15836 100 aa9.36□□□□□ -0.91
LMNA-222ENST00000508500 GTF2H5Q6ZYL4 71 aa9.36□□□□□ -0.91
LMNA-222ENST00000508500 HIGD2AQ9BW72 106 aa9.35□□□□□ -0.91
LMNA-222ENST00000508500 H7C2G1 150 aa9.34□□□□□ -0.91
LMNA-222ENST00000508500 SCGB1C2P0DMR2 95 aa9.34□□□□□ -0.91
LMNA-222ENST00000508500 SPRR4Q96PI1 79 aa9.34□□□□□ -0.91
LMNA-222ENST00000508500 KRTAP4-16G5E9R7 235 aaPredicted RBP9.33□□□□□ -0.92
LMNA-222ENST00000508500 H0YGX0 51 aa9.33□□□□□ -0.92
LMNA-222ENST00000508500 K7EP34 96 aa9.33□□□□□ -0.92
LMNA-222ENST00000508500 NCR3O14931 201 aa9.33□□□□□ -0.92
LMNA-222ENST00000508500 TRIAP1O43715 76 aa9.33□□□□□ -0.92
LMNA-222ENST00000508500 SPRR1AP35321 89 aa9.33□□□□□ -0.92
LMNA-222ENST00000508500 SPCS1Q9Y6A9 102 aa9.33□□□□□ -0.92
LMNA-222ENST00000508500 SMIM11BQ8TCY0 68 aa9.32□□□□□ -0.92
LMNA-222ENST00000508500 NAA38Q9BRA0 125 aaKnown RBP9.32□□□□□ -0.92
LMNA-222ENST00000508500 PRYO14603 147 aa9.31□□□□□ -0.92
LMNA-222ENST00000508500 KCNQ1DNQ9H478 68 aa9.31□□□□□ -0.92
LMNA-222ENST00000508500 TRBV7-6A0A0J9YX20 115 aa9.3□□□□□ -0.92
LMNA-222ENST00000508500 TRBV10-3A0A0K0K1G6 114 aa9.3□□□□□ -0.92
LMNA-222ENST00000508500 UBE2V1Q13404 147 aa9.3□□□□□ -0.92
LMNA-222ENST00000508500 ATXN8Q156A1 80 aa9.29□□□□□ -0.92
LMNA-222ENST00000508500 TRAV23DV6A0A075B6W5 121 aa9.28□□□□□ -0.92
LMNA-222ENST00000508500 A0A1B0GX51 115 aa9.28□□□□□ -0.92
LMNA-222ENST00000508500 SMCR5Q8TEV8 140 aa9.28□□□□□ -0.92
LMNA-222ENST00000508500 SNCGO76070 127 aa9.27□□□□□ -0.93
LMNA-222ENST00000508500 IGLV7-46A0A075B6I9 117 aa9.26□□□□□ -0.93
LMNA-222ENST00000508500 A0A0U1RQV1 116 aa9.26□□□□□ -0.93
LMNA-222ENST00000508500 TCL1BO95988 128 aa9.26□□□□□ -0.93
LMNA-222ENST00000508500 TPRXLQ17RH7 258 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms