RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 ZNF73O43830 326 aaPredicted RBP4.84□□□□□ -1.63
LIMCH1-207ENST00000508466 WFDC10BQ8IUB3 73 aa4.84□□□□□ -1.63
LIMCH1-207ENST00000508466 Q8IZM0 81 aa4.84□□□□□ -1.63
LIMCH1-207ENST00000508466 HCG22E2RYF7 251 aa4.84□□□□□ -1.63
LIMCH1-207ENST00000508466 MSMBP08118 114 aa4.84□□□□□ -1.63
LIMCH1-207ENST00000508466 GIG44P09565 113 aaPredicted RBP4.84□□□□□ -1.63
LIMCH1-207ENST00000508466 PSCAO43653 123 aa4.83□□□□□ -1.64
LIMCH1-207ENST00000508466 SPAG11BQ08648 103 aa4.83□□□□□ -1.64
LIMCH1-207ENST00000508466 A6NED7 52 aa4.83□□□□□ -1.64
LIMCH1-207ENST00000508466 COX7BP24311 80 aa4.83□□□□□ -1.64
LIMCH1-207ENST00000508466 ATP5EP56381 51 aaPredicted RBP4.83□□□□□ -1.64
LIMCH1-207ENST00000508466 Q5VV11 94 aa4.83□□□□□ -1.64
LIMCH1-207ENST00000508466 REG3AQ06141 175 aa4.83□□□□□ -1.64
LIMCH1-207ENST00000508466 K7EQZ3 153 aa4.82□□□□□ -1.64
LIMCH1-207ENST00000508466 LCA10Q71F78 164 aa4.82□□□□□ -1.64
LIMCH1-207ENST00000508466 PRAC1Q96KF2 57 aa4.82□□□□□ -1.64
LIMCH1-207ENST00000508466 RPL37AP8A6NKH3 93 aa4.82□□□□□ -1.64
LIMCH1-207ENST00000508466 RPL37AP61513 92 aaKnown RBP4.82□□□□□ -1.64
LIMCH1-207ENST00000508466 LINC00208Q96KT6 92 aa4.82□□□□□ -1.64
LIMCH1-207ENST00000508466 Q1T7F1 81 aa4.81□□□□□ -1.64
LIMCH1-207ENST00000508466 M0R378 163 aa4.81□□□□□ -1.64
LIMCH1-207ENST00000508466 ZNF702PQ9H963 129 aa4.81□□□□□ -1.64
LIMCH1-207ENST00000508466 NOTCH1P46531 2555 aa4.81□□□□□ -1.64
LIMCH1-207ENST00000508466 LCE2BO14633 110 aa4.81□□□□□ -1.64
LIMCH1-207ENST00000508466 BCE1O60756 84 aa4.81□□□□□ -1.64
LIMCH1-207ENST00000508466 CCL19Q99731 98 aa4.8□□□□□ -1.64
LIMCH1-207ENST00000508466 LINC00588Q9Y4M8 146 aa4.8□□□□□ -1.64
LIMCH1-207ENST00000508466 COL6A5A8TX70 2615 aa4.8□□□□□ -1.64
LIMCH1-207ENST00000508466 HECTD1Q9ULT8 2610 aa4.8□□□□□ -1.64
LIMCH1-207ENST00000508466 IGLV6-57P01721 117 aa4.8□□□□□ -1.64
LIMCH1-207ENST00000508466 C9orf66Q5T8R8 295 aa4.8□□□□□ -1.64
LIMCH1-207ENST00000508466 ATRQ13535 2644 aa4.8□□□□□ -1.64
LIMCH1-207ENST00000508466 APOC4P55056 127 aa4.79□□□□□ -1.64
LIMCH1-207ENST00000508466 UBE2BP63146 152 aa4.79□□□□□ -1.64
LIMCH1-207ENST00000508466 ADM2Q7Z4H4 148 aa4.79□□□□□ -1.64
LIMCH1-207ENST00000508466 C6orf48Q9UBA6 75 aa4.78□□□□□ -1.64
LIMCH1-207ENST00000508466 TENM1Q9UKZ4 2725 aa4.78□□□□□ -1.64
LIMCH1-207ENST00000508466 NBEAL1Q6ZS30 2694 aa4.78□□□□□ -1.64
LIMCH1-207ENST00000508466 FBXL19-AS1Q494R0 122 aa4.78□□□□□ -1.64
LIMCH1-207ENST00000508466 SPAG11AQ6PDA7 123 aa4.78□□□□□ -1.64
LIMCH1-207ENST00000508466 KTN1-AS1Q86SY8 53 aa4.78□□□□□ -1.64
LIMCH1-207ENST00000508466 LINC00528Q8N1L1 170 aa4.78□□□□□ -1.64
LIMCH1-207ENST00000508466 PRO3102Q9H379 93 aa4.78□□□□□ -1.64
LIMCH1-207ENST00000508466 A0A1W2PNM2 257 aa4.77□□□□□ -1.65
LIMCH1-207ENST00000508466 PDE6GP18545 87 aa4.77□□□□□ -1.65
LIMCH1-207ENST00000508466 ERC2-IT1O76042 136 aa4.77□□□□□ -1.65
LIMCH1-207ENST00000508466 H3BS24 57 aa4.76□□□□□ -1.65
LIMCH1-207ENST00000508466 PCOTHQ58A44 107 aa4.76□□□□□ -1.65
LIMCH1-207ENST00000508466 KPRPQ5T749 579 aaPredicted RBP4.76□□□□□ -1.65
LIMCH1-207ENST00000508466 IGSF10Q6WRI0 2623 aa4.76□□□□□ -1.65
LIMCH1-207ENST00000508466 A0A096LNI7 61 aa4.76□□□□□ -1.65
LIMCH1-207ENST00000508466 ETDCA0A1B0GVM5 59 aa4.76□□□□□ -1.65
LIMCH1-207ENST00000508466 Q8N377 158 aa4.76□□□□□ -1.65
LIMCH1-207ENST00000508466 IGHV4-31P0DP07 118 aa4.76□□□□□ -1.65
LIMCH1-207ENST00000508466 DSCR10P59022 87 aa4.76□□□□□ -1.65
LIMCH1-207ENST00000508466 C16orf74Q96GX8 76 aa4.76□□□□□ -1.65
LIMCH1-207ENST00000508466 UBE2AP49459 152 aa4.75□□□□□ -1.65
LIMCH1-207ENST00000508466 Q8N9P0 234 aaPredicted RBP4.75□□□□□ -1.65
LIMCH1-207ENST00000508466 B9D2Q9BPU9 175 aa4.75□□□□□ -1.65
LIMCH1-207ENST00000508466 MAST4O15021 2626 aa4.75□□□□□ -1.65
LIMCH1-207ENST00000508466 ELOF1P60002 83 aaKnown RBP4.75□□□□□ -1.65
LIMCH1-207ENST00000508466 CCL24O00175 119 aa4.74□□□□□ -1.65
LIMCH1-207ENST00000508466 CAMK2N2Q96S95 79 aa4.74□□□□□ -1.65
LIMCH1-207ENST00000508466 COX17Q14061 63 aa4.74□□□□□ -1.65
LIMCH1-207ENST00000508466 MDFIQ99750 246 aa4.74□□□□□ -1.65
LIMCH1-207ENST00000508466 FLNBO75369 2602 aaKnown RBP4.74□□□□□ -1.65
LIMCH1-207ENST00000508466 FAM168BA1KXE4 195 aa4.74□□□□□ -1.65
LIMCH1-207ENST00000508466 C1orf137Q5JT78 98 aa4.74□□□□□ -1.65
LIMCH1-207ENST00000508466 ITPR2Q14571 2701 aa4.73□□□□□ -1.65
LIMCH1-207ENST00000508466 C7orf33Q8WU49 177 aa4.73□□□□□ -1.65
LIMCH1-207ENST00000508466 DEFB135Q30KP9 77 aa4.72□□□□□ -1.65
LIMCH1-207ENST00000508466 SPINK7P58062 85 aa4.72□□□□□ -1.65
LIMCH1-207ENST00000508466 CSNK1G2-AS1Q8NCQ2 148 aa4.72□□□□□ -1.65
LIMCH1-207ENST00000508466 TENM3Q9P273 2699 aa4.72□□□□□ -1.65
LIMCH1-207ENST00000508466 C8orf87E5RJ46 101 aa4.71□□□□□ -1.65
LIMCH1-207ENST00000508466 IGLV1-51P01701 117 aa4.71□□□□□ -1.65
LIMCH1-207ENST00000508466 IGHV4-30-4P0DP06 118 aa4.71□□□□□ -1.65
LIMCH1-207ENST00000508466 ZCCHC13Q8WW36 166 aaKnown RBP4.71□□□□□ -1.65
LIMCH1-207ENST00000508466 A0A1B0GUV1 79 aa4.71□□□□□ -1.66
LIMCH1-207ENST00000508466 VPREB1P12018 145 aa4.71□□□□□ -1.66
LIMCH1-207ENST00000508466 SERTAD4-AS1Q5TG53 156 aa4.71□□□□□ -1.66
LIMCH1-207ENST00000508466 PRO0255Q9UI72 69 aa4.71□□□□□ -1.66
LIMCH1-207ENST00000508466 MOBPQ13875 183 aa4.71□□□□□ -1.66
LIMCH1-207ENST00000508466 FLG2Q5D862 2391 aaPredicted RBP4.7□□□□□ -1.66
LIMCH1-207ENST00000508466 C4orf3Q8WVX3 66 aa4.7□□□□□ -1.66
LIMCH1-207ENST00000508466 A6NN06 94 aa4.69□□□□□ -1.66
LIMCH1-207ENST00000508466 MP68P56378 58 aa4.69□□□□□ -1.66
LIMCH1-207ENST00000508466 Q6YL49 198 aa4.69□□□□□ -1.66
LIMCH1-207ENST00000508466 NSD1Q96L73 2696 aaPredicted RBP4.69□□□□□ -1.66
LIMCH1-207ENST00000508466 A0A087WSZ3 146 aa4.69□□□□□ -1.66
LIMCH1-207ENST00000508466 H0Y9P7 68 aa4.69□□□□□ -1.66
LIMCH1-207ENST00000508466 Q9BRP9 147 aa4.68□□□□□ -1.66
LIMCH1-207ENST00000508466 TENM2Q9NT68 2774 aa4.68□□□□□ -1.66
LIMCH1-207ENST00000508466 COA5Q86WW8 74 aa4.67□□□□□ -1.66
LIMCH1-207ENST00000508466 NKAPP1Q8N9T2 125 aa4.67□□□□□ -1.66
LIMCH1-207ENST00000508466 DSCR9P59020 149 aa4.66□□□□□ -1.66
LIMCH1-207ENST00000508466 LINC00313P59037 77 aa4.66□□□□□ -1.66
LIMCH1-207ENST00000508466 KRTAP10-9P60411 292 aa4.66□□□□□ -1.66
LIMCH1-207ENST00000508466 ATP11AUNQ6ZP68 121 aa4.66□□□□□ -1.66
LIMCH1-207ENST00000508466 C19orf73Q9NVV2 129 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms