RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 A0A0J9YXY3 114 aa11.22□□□□□ -0.61
UBE2D3-220ENST00000505307 E9PLD3 99 aa11.22□□□□□ -0.61
UBE2D3-220ENST00000505307 SLC25A20O43772 301 aa11.22□□□□□ -0.61
UBE2D3-220ENST00000505307 ZNF73O43830 326 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-220ENST00000505307 Q8N377 158 aa11.22□□□□□ -0.61
UBE2D3-220ENST00000505307 HINT1P49773 126 aaPredicted RBP11.21□□□□□ -0.61
UBE2D3-220ENST00000505307 COLCA2A8K830 154 aa11.2□□□□□ -0.62
UBE2D3-220ENST00000505307 SOSTDC1Q6X4U4 206 aa11.2□□□□□ -0.62
UBE2D3-220ENST00000505307 SEC61BP60468 96 aaKnown RBP11.19□□□□□ -0.62
UBE2D3-220ENST00000505307 ADAMTSL4-AS1Q5T5F5 129 aa11.19□□□□□ -0.62
UBE2D3-220ENST00000505307 NPC2P61916 151 aa11.17□□□□□ -0.62
UBE2D3-220ENST00000505307 C9orf153Q5TBE3 101 aa11.17□□□□□ -0.62
UBE2D3-220ENST00000505307 EIF4EBP3O60516 100 aaPredicted RBP11.16□□□□□ -0.62
UBE2D3-220ENST00000505307 TIMM17BO60830 172 aa11.15□□□□□ -0.62
UBE2D3-220ENST00000505307 SPANXCQ9NY87 97 aa11.15□□□□□ -0.62
UBE2D3-220ENST00000505307 SYS1-DBNDD2H3BUS1 97 aa11.14□□□□□ -0.63
UBE2D3-220ENST00000505307 SLC25A34Q6PIV7 304 aa11.14□□□□□ -0.63
UBE2D3-220ENST00000505307 LINC00308Q8TCZ7 52 aa11.13□□□□□ -0.63
UBE2D3-220ENST00000505307 ST20-AS1Q8NBB2 130 aa11.12□□□□□ -0.63
UBE2D3-220ENST00000505307 DHRS4-AS1Q9P1J3 65 aa11.12□□□□□ -0.63
UBE2D3-220ENST00000505307 SLC7A5P1Q8MH63 180 aa11.11□□□□□ -0.63
UBE2D3-220ENST00000505307 OR13C6PQ8NH95 151 aa11.11□□□□□ -0.63
UBE2D3-220ENST00000505307 LITAFQ99732 161 aa11.11□□□□□ -0.63
UBE2D3-220ENST00000505307 SPRR1BP22528 89 aa11.1□□□□□ -0.63
UBE2D3-220ENST00000505307 SPANXDQ9BXN6 97 aa11.1□□□□□ -0.63
UBE2D3-220ENST00000505307 XP32Q5T750 250 aa11.09□□□□□ -0.63
UBE2D3-220ENST00000505307 LINC01545Q5VT33 79 aa11.09□□□□□ -0.63
UBE2D3-220ENST00000505307 PET117Q6UWS5 81 aa11.09□□□□□ -0.63
UBE2D3-220ENST00000505307 LINC01547P58512 204 aaPredicted RBP11.08□□□□□ -0.64
UBE2D3-220ENST00000505307 LINC00518Q8N0U6 118 aa11.08□□□□□ -0.64
UBE2D3-220ENST00000505307 HIST1H2BKO60814 126 aa11.07□□□□□ -0.64
UBE2D3-220ENST00000505307 HIST1H2BJP06899 126 aa11.07□□□□□ -0.64
UBE2D3-220ENST00000505307 HIST1H2BOP23527 126 aa11.07□□□□□ -0.64
UBE2D3-220ENST00000505307 HIST1H2BBP33778 126 aa11.07□□□□□ -0.64
UBE2D3-220ENST00000505307 HIST1H2BDP58876 126 aa11.07□□□□□ -0.64
UBE2D3-220ENST00000505307 HIST1H2BCP62807 126 aa11.07□□□□□ -0.64
UBE2D3-220ENST00000505307 HIST2H2BEQ16778 126 aa11.07□□□□□ -0.64
UBE2D3-220ENST00000505307 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.07□□□□□ -0.64
UBE2D3-220ENST00000505307 HIST1H2BHQ93079 126 aa11.07□□□□□ -0.64
UBE2D3-220ENST00000505307 HIST1H2BNQ99877 126 aa11.07□□□□□ -0.64
UBE2D3-220ENST00000505307 HIST1H2BMQ99879 126 aa11.07□□□□□ -0.64
UBE2D3-220ENST00000505307 LIMD2Q9BT23 127 aa11.07□□□□□ -0.64
UBE2D3-220ENST00000505307 ZNF815PA8K554 130 aa11.06□□□□□ -0.64
UBE2D3-220ENST00000505307 LAMTOR3Q9UHA4 124 aa11.06□□□□□ -0.64
UBE2D3-220ENST00000505307 ELOF1P60002 83 aaKnown RBP11.03□□□□□ -0.64
UBE2D3-220ENST00000505307 KRTAP4-1Q9BYQ7 146 aa11.03□□□□□ -0.64
UBE2D3-220ENST00000505307 KRTAP9-6A0A140TA67 174 aa11.02□□□□□ -0.65
UBE2D3-220ENST00000505307 COX7BP24311 80 aa11.02□□□□□ -0.65
UBE2D3-220ENST00000505307 COPS9Q8WXC6 57 aa11.01□□□□□ -0.65
UBE2D3-220ENST00000505307 C6orf99Q4VX62 202 aa11□□□□□ -0.65
UBE2D3-220ENST00000505307 TRBV7-6A0A0J9YX20 115 aa10.99□□□□□ -0.65
UBE2D3-220ENST00000505307 CD164Q04900 197 aa10.99□□□□□ -0.65
UBE2D3-220ENST00000505307 TAL2Q16559 108 aa10.99□□□□□ -0.65
UBE2D3-220ENST00000505307 C3orf79P0CE67 100 aa10.98□□□□□ -0.65
UBE2D3-220ENST00000505307 SCGB1D4Q6XE38 83 aa10.97□□□□□ -0.65
UBE2D3-220ENST00000505307 TTTY13Q9BZ97 58 aa10.97□□□□□ -0.65
UBE2D3-220ENST00000505307 TEX49A0A1B0GTD5 131 aa10.96□□□□□ -0.65
UBE2D3-220ENST00000505307 HRCT1Q6UXD1 115 aa10.96□□□□□ -0.65
UBE2D3-220ENST00000505307 PRO1933Q9H354 126 aa10.96□□□□□ -0.65
UBE2D3-220ENST00000505307 IFITM1P13164 125 aa10.95□□□□□ -0.66
UBE2D3-220ENST00000505307 A0A1B0GWB2 263 aa10.94□□□□□ -0.66
UBE2D3-220ENST00000505307 COA6Q5JTJ3 125 aaKnown RBP10.94□□□□□ -0.66
UBE2D3-220ENST00000505307 Q6ZVH6 145 aa10.94□□□□□ -0.66
UBE2D3-220ENST00000505307 C20orf202A1L168 122 aa10.93□□□□□ -0.66
UBE2D3-220ENST00000505307 KRTDAPP60985 99 aa10.93□□□□□ -0.66
UBE2D3-220ENST00000505307 DEFB105AQ8NG35 78 aa10.93□□□□□ -0.66
UBE2D3-220ENST00000505307 Q1RN00 199 aa10.92□□□□□ -0.66
UBE2D3-220ENST00000505307 H7C2G1 150 aa10.91□□□□□ -0.66
UBE2D3-220ENST00000505307 AKR1D1P51857 326 aa10.91□□□□□ -0.66
UBE2D3-220ENST00000505307 Q5XG85 94 aa10.91□□□□□ -0.66
UBE2D3-220ENST00000505307 A4D1N5 150 aa10.9□□□□□ -0.66
UBE2D3-220ENST00000505307 A6NDN8 102 aa10.89□□□□□ -0.67
UBE2D3-220ENST00000505307 IGLV5-48A0A075B6I7 105 aa10.88□□□□□ -0.67
UBE2D3-220ENST00000505307 C9orf92A6NGG3 77 aa10.87□□□□□ -0.67
UBE2D3-220ENST00000505307 SMIM29Q86T20 159 aa10.87□□□□□ -0.67
UBE2D3-220ENST00000505307 NHP2Q9NX24 153 aaKnown RBP10.87□□□□□ -0.67
UBE2D3-220ENST00000505307 ANKRD39Q53RE8 183 aa10.86□□□□□ -0.67
UBE2D3-220ENST00000505307 PCOTHQ58A44 107 aa10.86□□□□□ -0.67
UBE2D3-220ENST00000505307 TRAV13-2A0A0B4J235 113 aa10.85□□□□□ -0.67
UBE2D3-220ENST00000505307 MUSTN1Q8IVN3 82 aa10.85□□□□□ -0.67
UBE2D3-220ENST00000505307 IGLV8-61A0A075B6I0 122 aa10.83□□□□□ -0.68
UBE2D3-220ENST00000505307 LCE2DQ5TA82 110 aaPredicted RBP10.83□□□□□ -0.68
UBE2D3-220ENST00000505307 SNRPEP62304 92 aaKnown RBP10.82□□□□□ -0.68
UBE2D3-220ENST00000505307 LCE2CQ5TA81 110 aa10.82□□□□□ -0.68
UBE2D3-220ENST00000505307 C1orf195Q5TG92 126 aa10.81□□□□□ -0.68
UBE2D3-220ENST00000505307 PCP2Q8IVA1 136 aa10.81□□□□□ -0.68
UBE2D3-220ENST00000505307 ATOH7Q8N100 152 aa10.8□□□□□ -0.68
UBE2D3-220ENST00000505307 SMIM11BQ8TCY0 68 aa10.78□□□□□ -0.68
UBE2D3-220ENST00000505307 TCL1BO95988 128 aa10.77□□□□□ -0.69
UBE2D3-220ENST00000505307 VAMP3Q15836 100 aa10.77□□□□□ -0.69
UBE2D3-220ENST00000505307 KRTAP19-2Q3LHN2 52 aa10.77□□□□□ -0.69
UBE2D3-220ENST00000505307 F8WEM9 126 aa10.74□□□□□ -0.69
UBE2D3-220ENST00000505307 FSIP2Q5CZC0 6907 aa10.73□□□□□ -0.69
UBE2D3-220ENST00000505307 A0A0G2JQZ4 141 aa10.72□□□□□ -0.69
UBE2D3-220ENST00000505307 CFC1BP0CG36 223 aa10.72□□□□□ -0.69
UBE2D3-220ENST00000505307 RPL37P61927 97 aaKnown RBP10.71□□□□□ -0.69
UBE2D3-220ENST00000505307 MT1HP80294 61 aa10.71□□□□□ -0.69
UBE2D3-220ENST00000505307 LINC00575Q6W349 94 aa10.7□□□□□ -0.7
UBE2D3-220ENST00000505307 HSBP1L1C9JCN9 74 aa10.69□□□□□ -0.7
UBE2D3-220ENST00000505307 Q6JHZ5 121 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms