RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 ODF3Q96PU9 254 aa2.46□□□□□ -2.02
PDLIM1P4-201ENST00000504327 KLK12Q9UKR0 248 aa2.46□□□□□ -2.02
PDLIM1P4-201ENST00000504327 PLECQ15149 4684 aaKnown RBP2.46□□□□□ -2.02
PDLIM1P4-201ENST00000504327 A0A087WSZ3 146 aa2.45□□□□□ -2.02
PDLIM1P4-201ENST00000504327 TMSB15BA0A087X1C1 80 aa2.45□□□□□ -2.02
PDLIM1P4-201ENST00000504327 SNCGO76070 127 aa2.45□□□□□ -2.02
PDLIM1P4-201ENST00000504327 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.45□□□□□ -2.02
PDLIM1P4-201ENST00000504327 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
PDLIM1P4-201ENST00000504327 BAGE2Q86Y30 109 aa2.45□□□□□ -2.02
PDLIM1P4-201ENST00000504327 IGKV2D-24A0A075B6R9 120 aa2.44□□□□□ -2.02
PDLIM1P4-201ENST00000504327 COLCA2A8K830 154 aa2.44□□□□□ -2.02
PDLIM1P4-201ENST00000504327 F2Z2F3 143 aa2.44□□□□□ -2.02
PDLIM1P4-201ENST00000504327 ERC2-IT1O76042 136 aa2.44□□□□□ -2.02
PDLIM1P4-201ENST00000504327 APOC3P02656 99 aa2.44□□□□□ -2.02
PDLIM1P4-201ENST00000504327 C2orf82Q6UX34 121 aa2.44□□□□□ -2.02
PDLIM1P4-201ENST00000504327 LINC00269Q8N2A0 174 aa2.44□□□□□ -2.02
PDLIM1P4-201ENST00000504327 FAM19A2Q8N3H0 131 aa2.44□□□□□ -2.02
PDLIM1P4-201ENST00000504327 TSKUQ8WUA8 353 aa2.44□□□□□ -2.02
PDLIM1P4-201ENST00000504327 LINC00052Q96N35 136 aa2.44□□□□□ -2.02
PDLIM1P4-201ENST00000504327 Q9BRP9 147 aa2.44□□□□□ -2.02
PDLIM1P4-201ENST00000504327 WFDC10AQ9H1F0 79 aa2.44□□□□□ -2.02
PDLIM1P4-201ENST00000504327 SMCO4Q9NRQ5 59 aa2.44□□□□□ -2.02
PDLIM1P4-201ENST00000504327 STARD9Q9P2P6 4700 aa2.43□□□□□ -2.02
PDLIM1P4-201ENST00000504327 IGLV2-18A0A075B6J9 118 aa2.43□□□□□ -2.02
PDLIM1P4-201ENST00000504327 TRAV10A0A0B4J240 114 aa2.43□□□□□ -2.02
PDLIM1P4-201ENST00000504327 TRAV21A0A0B4J279 112 aa2.43□□□□□ -2.02
PDLIM1P4-201ENST00000504327 MUC21A0A0G2JKD1 596 aa2.43□□□□□ -2.02
PDLIM1P4-201ENST00000504327 MUC21A0A140T8X8 626 aa2.43□□□□□ -2.02
PDLIM1P4-201ENST00000504327 IBA57-AS1B1ANH7 110 aa2.43□□□□□ -2.02
PDLIM1P4-201ENST00000504327 ADIRFQ15847 76 aa2.43□□□□□ -2.02
PDLIM1P4-201ENST00000504327 DEFB121Q5J5C9 76 aa2.43□□□□□ -2.02
PDLIM1P4-201ENST00000504327 PSMG4Q5JS54 123 aa2.43□□□□□ -2.02
PDLIM1P4-201ENST00000504327 SPANXN1Q5VSR9 72 aa2.43□□□□□ -2.02
PDLIM1P4-201ENST00000504327 LINC00322Q6ZN03 302 aaPredicted RBP2.43□□□□□ -2.02
PDLIM1P4-201ENST00000504327 FP248Q71RG6 208 aaPredicted RBP2.43□□□□□ -2.02
PDLIM1P4-201ENST00000504327 VAMP8Q9BV40 100 aa2.43□□□□□ -2.02
PDLIM1P4-201ENST00000504327 SACSQ9NZJ4 4579 aa2.43□□□□□ -2.02
PDLIM1P4-201ENST00000504327 C7orf77A4D0Y5 90 aa2.42□□□□□ -2.02
PDLIM1P4-201ENST00000504327 M0R3E3 92 aa2.42□□□□□ -2.02
PDLIM1P4-201ENST00000504327 ADCYAP1P18509 176 aa2.42□□□□□ -2.02
PDLIM1P4-201ENST00000504327 TDRG1Q3Y452 100 aa2.42□□□□□ -2.02
PDLIM1P4-201ENST00000504327 Q86TA4 180 aa2.42□□□□□ -2.02
PDLIM1P4-201ENST00000504327 SBSPONQ8IVN8 264 aa2.42□□□□□ -2.02
PDLIM1P4-201ENST00000504327 DNAH7Q8WXX0 4024 aa2.42□□□□□ -2.02
PDLIM1P4-201ENST00000504327 HERC1Q15751 4861 aa2.41□□□□□ -2.02
PDLIM1P4-201ENST00000504327 DYNC2H1Q8NCM8 4307 aaKnown RBP2.41□□□□□ -2.02
PDLIM1P4-201ENST00000504327 IGKV3-7A0A075B6H7 116 aa2.41□□□□□ -2.02
PDLIM1P4-201ENST00000504327 IGKV2-40A0A087WW87 121 aaPredicted RBP2.41□□□□□ -2.02
PDLIM1P4-201ENST00000504327 TRAV12-1A0A0B4J245 112 aa2.41□□□□□ -2.02
PDLIM1P4-201ENST00000504327 A0A1W2PNM2 257 aa2.41□□□□□ -2.02
PDLIM1P4-201ENST00000504327 SMIM27A0A1W2PRY6 76 aa2.41□□□□□ -2.02
PDLIM1P4-201ENST00000504327 A8MTW9 85 aa2.41□□□□□ -2.02
PDLIM1P4-201ENST00000504327 PPP1R17O96001 155 aa2.41□□□□□ -2.02
PDLIM1P4-201ENST00000504327 IGKV2D-40P01614 121 aaPredicted RBP2.41□□□□□ -2.02
PDLIM1P4-201ENST00000504327 HRES1P13985 223 aa2.41□□□□□ -2.02
PDLIM1P4-201ENST00000504327 ATP5EP56381 51 aaPredicted RBP2.41□□□□□ -2.02
PDLIM1P4-201ENST00000504327 DEFB131AP59861 70 aa2.41□□□□□ -2.02
PDLIM1P4-201ENST00000504327 Q6ZTI0 123 aa2.41□□□□□ -2.02
PDLIM1P4-201ENST00000504327 CSMD3Q7Z407 3707 aa2.41□□□□□ -2.02
PDLIM1P4-201ENST00000504327 A0A1B0GUT8 65 aa2.4□□□□□ -2.03
PDLIM1P4-201ENST00000504327 ASIPP42127 132 aa2.4□□□□□ -2.03
PDLIM1P4-201ENST00000504327 DEFB1P60022 68 aa2.4□□□□□ -2.03
PDLIM1P4-201ENST00000504327 PYY3Q5JQD4 70 aa2.4□□□□□ -2.03
PDLIM1P4-201ENST00000504327 DSCR8Q96T75 97 aa2.4□□□□□ -2.03
PDLIM1P4-201ENST00000504327 CNFNQ9BYD5 112 aa2.4□□□□□ -2.03
PDLIM1P4-201ENST00000504327 PRO2289Q9P1D8 64 aa2.4□□□□□ -2.03
PDLIM1P4-201ENST00000504327 DNAH1Q9P2D7 4330 aa2.39□□□□□ -2.03
PDLIM1P4-201ENST00000504327 HIGD1CA8MV81 97 aa2.39□□□□□ -2.03
PDLIM1P4-201ENST00000504327 COX7CP15954 63 aa2.39□□□□□ -2.03
PDLIM1P4-201ENST00000504327 MIR22HGQ0VDD5 57 aa2.39□□□□□ -2.03
PDLIM1P4-201ENST00000504327 IQCJQ1A5X6 159 aa2.39□□□□□ -2.03
PDLIM1P4-201ENST00000504327 GDF5OSQ5U4N7 250 aa2.39□□□□□ -2.03
PDLIM1P4-201ENST00000504327 C5orf38Q86SI9 138 aa2.39□□□□□ -2.03
PDLIM1P4-201ENST00000504327 Q8N8P6 123 aa2.39□□□□□ -2.03
PDLIM1P4-201ENST00000504327 Q8TAT8 98 aa2.39□□□□□ -2.03
PDLIM1P4-201ENST00000504327 TMEM141Q96I45 108 aa2.39□□□□□ -2.03
PDLIM1P4-201ENST00000504327 V9GYV3 84 aa2.39□□□□□ -2.03
PDLIM1P4-201ENST00000504327 MUC2Q02817 5179 aa2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 VPS13DQ5THJ4 4388 aa2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 IGKV2-28A0A075B6P5 120 aa2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 TRAV12-3A0A0B4J271 114 aa2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 LINC01549A6NIU2 74 aa2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 K7EMI3 77 aa2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 IGKV2D-28P01615 120 aa2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 CRIP1P50238 77 aa2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 ELOBQ15370 118 aa2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 SPINK13Q1W4C9 94 aa2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 DEFB135Q30KP9 77 aa2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 C9orf163Q8N9P6 203 aa2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 TMEM263Q8WUH6 116 aaKnown RBP2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 PPDPFLQ8WWR9 84 aa2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 PRO1933Q9H354 126 aa2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 DPH3P1Q9H4G8 78 aa2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 NDUFA12Q9UI09 145 aa2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 TIMM8BQ9Y5J9 83 aaPredicted RBP2.38□□□□□ -2.03
PDLIM1P4-201ENST00000504327 MT-ATP8P03928 68 aa2.37□□□□□ -2.03
PDLIM1P4-201ENST00000504327 ARMS2P0C7Q2 107 aa2.37□□□□□ -2.03
PDLIM1P4-201ENST00000504327 PRB4P10163 310 aaPredicted RBP2.37□□□□□ -2.03
PDLIM1P4-201ENST00000504327 TRBV10-1A0A0K0K1A3 114 aa2.36□□□□□ -2.03
PDLIM1P4-201ENST00000504327 SPART-AS1P0CW21 52 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms