RNA–Protein interactions for RNA: ENST00000503252.1

LPCAT1-203, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 2

Gene LPCAT1, Length 2,694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-203ENST00000503252 TMEM256-PLSCR3K7ERE1 68 aa12.31□□□□□ -0.44
LPCAT1-203ENST00000503252 DNAH10OSP0CZ25 163 aa12.3□□□□□ -0.44
LPCAT1-203ENST00000503252 TRAV10A0A0B4J240 114 aa12.29□□□□□ -0.44
LPCAT1-203ENST00000503252 K7EIL1 84 aa12.29□□□□□ -0.44
LPCAT1-203ENST00000503252 HUWE1Q7Z6Z7 4374 aaKnown RBP12.29□□□□□ -0.44
LPCAT1-203ENST00000503252 VPREB1P12018 145 aa12.29□□□□□ -0.44
LPCAT1-203ENST00000503252 TM2D3Q9BRN9 247 aa12.29□□□□□ -0.44
LPCAT1-203ENST00000503252 RBM3P98179 157 aaKnown RBP12.28□□□□□ -0.44
LPCAT1-203ENST00000503252 TRBV7-6A0A0J9YX20 115 aa12.28□□□□□ -0.44
LPCAT1-203ENST00000503252 CCKP06307 115 aa12.28□□□□□ -0.44
LPCAT1-203ENST00000503252 LINC00588Q9Y4M8 146 aa12.28□□□□□ -0.44
LPCAT1-203ENST00000503252 Q6ZRP5 223 aa12.26□□□□□ -0.45
LPCAT1-203ENST00000503252 JMJD7-PLA2G4BH0Y9G9 81 aa12.26□□□□□ -0.45
LPCAT1-203ENST00000503252 DIRC1Q969H9 104 aa12.25□□□□□ -0.45
LPCAT1-203ENST00000503252 ZNF73O43830 326 aaPredicted RBP12.24□□□□□ -0.45
LPCAT1-203ENST00000503252 SYCNQ0VAF6 134 aa12.24□□□□□ -0.45
LPCAT1-203ENST00000503252 MPLKIPQ8TAP9 179 aa12.24□□□□□ -0.45
LPCAT1-203ENST00000503252 Q6ZQY7 126 aa12.23□□□□□ -0.45
LPCAT1-203ENST00000503252 SNURFQ9Y675 71 aa12.23□□□□□ -0.45
LPCAT1-203ENST00000503252 F8WEM9 126 aa12.22□□□□□ -0.45
LPCAT1-203ENST00000503252 M0R378 163 aa12.22□□□□□ -0.45
LPCAT1-203ENST00000503252 CASC10Q5T4H9 136 aa12.21□□□□□ -0.46
LPCAT1-203ENST00000503252 RMI2Q96E14 147 aa12.2□□□□□ -0.46
LPCAT1-203ENST00000503252 COX7BP24311 80 aa12.2□□□□□ -0.46
LPCAT1-203ENST00000503252 MGAM2Q2M2H8 2515 aa12.2□□□□□ -0.46
LPCAT1-203ENST00000503252 DNAH1Q9P2D7 4330 aa12.19□□□□□ -0.46
LPCAT1-203ENST00000503252 ELOF1P60002 83 aaKnown RBP12.19□□□□□ -0.46
LPCAT1-203ENST00000503252 KLKP1Q107X0 134 aa12.19□□□□□ -0.46
LPCAT1-203ENST00000503252 LAMTOR3Q9UHA4 124 aa12.18□□□□□ -0.46
LPCAT1-203ENST00000503252 CD164Q04900 197 aa12.16□□□□□ -0.46
LPCAT1-203ENST00000503252 FAM229BQ4G0N7 80 aa12.16□□□□□ -0.46
LPCAT1-203ENST00000503252 TRAV7A0A075B6U4 112 aa12.15□□□□□ -0.46
LPCAT1-203ENST00000503252 SERTAD4-AS1Q5TG53 156 aa12.14□□□□□ -0.47
LPCAT1-203ENST00000503252 Q6ZQT0 140 aa12.13□□□□□ -0.47
LPCAT1-203ENST00000503252 PRR15Q8IV56 129 aa12.13□□□□□ -0.47
LPCAT1-203ENST00000503252 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.13□□□□□ -0.47
LPCAT1-203ENST00000503252 LINC00528Q8N1L1 170 aa12.12□□□□□ -0.47
LPCAT1-203ENST00000503252 ATP5EP2Q5VTU8 51 aa12.11□□□□□ -0.47
LPCAT1-203ENST00000503252 COL7A1Q02388 2944 aa12.11□□□□□ -0.47
LPCAT1-203ENST00000503252 NKAPP1Q8N9T2 125 aa12.11□□□□□ -0.47
LPCAT1-203ENST00000503252 M0R2N4 97 aa12.1□□□□□ -0.47
LPCAT1-203ENST00000503252 LOC110117498A0A087WWA1 95 aa12.1□□□□□ -0.47
LPCAT1-203ENST00000503252 TLX1NBP0CAT3 122 aa12.09□□□□□ -0.47
LPCAT1-203ENST00000503252 C7orf33Q8WU49 177 aa12.09□□□□□ -0.47
LPCAT1-203ENST00000503252 LYSTQ99698 3801 aa12.09□□□□□ -0.47
LPCAT1-203ENST00000503252 H3BQ85 93 aa12.08□□□□□ -0.48
LPCAT1-203ENST00000503252 FAM168BA1KXE4 195 aa12.08□□□□□ -0.48
LPCAT1-203ENST00000503252 STAB2Q8WWQ8 2551 aa12.07□□□□□ -0.48
LPCAT1-203ENST00000503252 KCNQ1DNQ9H478 68 aa12.06□□□□□ -0.48
LPCAT1-203ENST00000503252 ATP5EP56381 51 aaPredicted RBP12.06□□□□□ -0.48
LPCAT1-203ENST00000503252 UBL5Q9BZL1 73 aa12.04□□□□□ -0.48
LPCAT1-203ENST00000503252 DNAH9Q9NYC9 4486 aa12.04□□□□□ -0.48
LPCAT1-203ENST00000503252 RPL37AP8A6NKH3 93 aa12.04□□□□□ -0.48
LPCAT1-203ENST00000503252 PLA2G2DQ9UNK4 145 aa12.03□□□□□ -0.48
LPCAT1-203ENST00000503252 NDUFC1O43677 76 aa12.03□□□□□ -0.48
LPCAT1-203ENST00000503252 KRTAP7-1Q8IUC3 87 aa12.03□□□□□ -0.48
LPCAT1-203ENST00000503252 KRTAP1-5Q9BYS1 174 aa12.03□□□□□ -0.48
LPCAT1-203ENST00000503252 DNAH10Q8IVF4 4471 aa12.02□□□□□ -0.49
LPCAT1-203ENST00000503252 BCE1O60756 84 aa12.02□□□□□ -0.49
LPCAT1-203ENST00000503252 MDFIQ99750 246 aa12.02□□□□□ -0.49
LPCAT1-203ENST00000503252 C4orf48Q5BLP8 95 aa12.01□□□□□ -0.49
LPCAT1-203ENST00000503252 TRBV7-4A0A0J9YYF1 115 aa12.01□□□□□ -0.49
LPCAT1-203ENST00000503252 PDE6GP18545 87 aa12□□□□□ -0.49
LPCAT1-203ENST00000503252 MRPL55Q7Z7F7 128 aaKnown RBP11.99□□□□□ -0.49
LPCAT1-203ENST00000503252 IGLV5-37A0A075B6J1 123 aa11.98□□□□□ -0.49
LPCAT1-203ENST00000503252 IGLV1-50A0A075B6I6 118 aa11.98□□□□□ -0.49
LPCAT1-203ENST00000503252 Q6ZVQ6 151 aa11.96□□□□□ -0.5
LPCAT1-203ENST00000503252 DEFB105AQ8NG35 78 aa11.96□□□□□ -0.5
LPCAT1-203ENST00000503252 KRTAP4-16G5E9R7 235 aaPredicted RBP11.95□□□□□ -0.5
LPCAT1-203ENST00000503252 APLNQ9ULZ1 77 aa11.94□□□□□ -0.5
LPCAT1-203ENST00000503252 Q6ZRX8 168 aa11.94□□□□□ -0.5
LPCAT1-203ENST00000503252 PRYO14603 147 aa11.94□□□□□ -0.5
LPCAT1-203ENST00000503252 UBE2DNLQ8IWF7 75 aa11.94□□□□□ -0.5
LPCAT1-203ENST00000503252 Q9BRP9 147 aa11.94□□□□□ -0.5
LPCAT1-203ENST00000503252 SPRR1AP35321 89 aa11.93□□□□□ -0.5
LPCAT1-203ENST00000503252 LINC01547P58512 204 aaPredicted RBP11.93□□□□□ -0.5
LPCAT1-203ENST00000503252 HAMPP81172 84 aa11.93□□□□□ -0.5
LPCAT1-203ENST00000503252 Q8N377 158 aa11.93□□□□□ -0.5
LPCAT1-203ENST00000503252 CSMD3Q7Z407 3707 aa11.91□□□□□ -0.5
LPCAT1-203ENST00000503252 ETDCA0A1B0GVM5 59 aa11.91□□□□□ -0.5
LPCAT1-203ENST00000503252 DYNC2H1Q8NCM8 4307 aaKnown RBP11.91□□□□□ -0.5
LPCAT1-203ENST00000503252 DNAH7Q8WXX0 4024 aa11.91□□□□□ -0.5
LPCAT1-203ENST00000503252 PSCAO43653 123 aa11.9□□□□□ -0.5
LPCAT1-203ENST00000503252 B9D2Q9BPU9 175 aa11.9□□□□□ -0.5
LPCAT1-203ENST00000503252 DHRS4-AS1Q9P1J3 65 aa11.9□□□□□ -0.5
LPCAT1-203ENST00000503252 TENM2Q9NT68 2774 aa11.9□□□□□ -0.5
LPCAT1-203ENST00000503252 RBM12B-AS1Q9P1G2 102 aa11.88□□□□□ -0.51
LPCAT1-203ENST00000503252 A0A096LNI7 61 aa11.87□□□□□ -0.51
LPCAT1-203ENST00000503252 ST20-AS1Q8NBB2 130 aa11.87□□□□□ -0.51
LPCAT1-203ENST00000503252 IGKV2-24A0A0C4DH68 120 aa11.87□□□□□ -0.51
LPCAT1-203ENST00000503252 TMEM254Q8TBM7 123 aa11.87□□□□□ -0.51
LPCAT1-203ENST00000503252 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.85□□□□□ -0.51
LPCAT1-203ENST00000503252 ERC2-IT1O76042 136 aa11.85□□□□□ -0.51
LPCAT1-203ENST00000503252 CNBPP62633 177 aaKnown RBP11.85□□□□□ -0.51
LPCAT1-203ENST00000503252 PLECQ15149 4684 aaKnown RBP11.85□□□□□ -0.51
LPCAT1-203ENST00000503252 SCXQ7RTU7 201 aa11.84□□□□□ -0.51
LPCAT1-203ENST00000503252 FUSP35637 526 aaKnown RBP eCLIP11.83□□□□□ -0.51
LPCAT1-203ENST00000503252 LRCOL1A6NCL2 159 aa11.83□□□□□ -0.52
LPCAT1-203ENST00000503252 C16orf90A8MZG2 172 aa11.83□□□□□ -0.52
LPCAT1-203ENST00000503252 REG3GQ6UW15 175 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms