RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	FAM30A	Q9NZY2	134 aa		7.65	□□□□□ -1.18
MATR3-231	ENST00000502394	APOB	P04114	4563 aa	Known RBP	7.64	□□□□□ -1.19
MATR3-231	ENST00000502394		A0A087WYN8	130 aa		7.64	□□□□□ -1.19
MATR3-231	ENST00000502394	TSPAN13	O95857	204 aa		7.64	□□□□□ -1.19
MATR3-231	ENST00000502394	NKAPP1	Q8N9T2	125 aa		7.64	□□□□□ -1.19
MATR3-231	ENST00000502394	TMEM126A	Q9H061	195 aa		7.64	□□□□□ -1.19
MATR3-231	ENST00000502394	TRBV10-3	A0A0K0K1G6	114 aa		7.63	□□□□□ -1.19
MATR3-231	ENST00000502394		M0QXV9	152 aa		7.63	□□□□□ -1.19
MATR3-231	ENST00000502394	MRPL55	Q7Z7F7	128 aa	Known RBP	7.63	□□□□□ -1.19
MATR3-231	ENST00000502394	LINC00167	Q96N53	147 aa		7.63	□□□□□ -1.19
MATR3-231	ENST00000502394	IGLV1-50	A0A075B6I6	118 aa		7.61	□□□□□ -1.19
MATR3-231	ENST00000502394	C9orf118	A6NHY6	69 aa		7.61	□□□□□ -1.19
MATR3-231	ENST00000502394	PLA2G1B	P04054	148 aa	Known RBP	7.61	□□□□□ -1.19
MATR3-231	ENST00000502394	RPL28	P46779	137 aa	Known RBP	7.61	□□□□□ -1.19
MATR3-231	ENST00000502394	S100A7L2	Q5SY68	101 aa		7.61	□□□□□ -1.19
MATR3-231	ENST00000502394	OR13C6P	Q8NH95	151 aa		7.61	□□□□□ -1.19
MATR3-231	ENST00000502394	SMIM11B	Q8TCY0	68 aa		7.61	□□□□□ -1.19
MATR3-231	ENST00000502394	GAGE10	A6NGK3	116 aa		7.6	□□□□□ -1.19
MATR3-231	ENST00000502394	PHF5A	Q7RTV0	110 aa	Known RBP	7.6	□□□□□ -1.19
MATR3-231	ENST00000502394	KCNQ1DN	Q9H478	68 aa		7.6	□□□□□ -1.19
MATR3-231	ENST00000502394		H7C2G1	150 aa		7.59	□□□□□ -1.19
MATR3-231	ENST00000502394	KRTAP11-1	Q8IUC1	163 aa		7.59	□□□□□ -1.19
MATR3-231	ENST00000502394	TRAV23DV6	A0A075B6W5	121 aa		7.58	□□□□□ -1.2
MATR3-231	ENST00000502394	PRY	O14603	147 aa		7.58	□□□□□ -1.2
MATR3-231	ENST00000502394	TRIAP1	O43715	76 aa		7.58	□□□□□ -1.2
MATR3-231	ENST00000502394	SPRR1A	P35321	89 aa		7.58	□□□□□ -1.2
MATR3-231	ENST00000502394	SCX	Q7RTU7	201 aa		7.58	□□□□□ -1.2
MATR3-231	ENST00000502394	CIRBP-AS1	Q8TBR5	109 aa		7.58	□□□□□ -1.2
MATR3-231	ENST00000502394	NAA38	Q9BRA0	125 aa	Known RBP	7.58	□□□□□ -1.2
MATR3-231	ENST00000502394	RPL37AP8	A6NKH3	93 aa		7.57	□□□□□ -1.2
MATR3-231	ENST00000502394		H3BUT2	72 aa		7.57	□□□□□ -1.2
MATR3-231	ENST00000502394		Q1RN00	199 aa		7.57	□□□□□ -1.2
MATR3-231	ENST00000502394	DPH3	Q96FX2	82 aa		7.57	□□□□□ -1.2
MATR3-231	ENST00000502394	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	7.56	□□□□□ -1.2
MATR3-231	ENST00000502394	CBY1	Q9Y3M2	126 aa		7.56	□□□□□ -1.2
MATR3-231	ENST00000502394		A0A1W2PPM0	123 aa		7.55	□□□□□ -1.2
MATR3-231	ENST00000502394	ZNF73	O43830	326 aa	Predicted RBP	7.55	□□□□□ -1.2
MATR3-231	ENST00000502394	C6orf99	Q4VX62	202 aa		7.55	□□□□□ -1.2
MATR3-231	ENST00000502394	TRBV7-6	A0A0J9YX20	115 aa		7.54	□□□□□ -1.2
MATR3-231	ENST00000502394	DIRC1	Q969H9	104 aa		7.54	□□□□□ -1.2
MATR3-231	ENST00000502394	PSMB2	P49721	201 aa		7.53	□□□□□ -1.2
MATR3-231	ENST00000502394	XG	P55808	180 aa		7.53	□□□□□ -1.2
MATR3-231	ENST00000502394	UBE2B	P63146	152 aa		7.53	□□□□□ -1.2
MATR3-231	ENST00000502394	EPPK1	P58107	5090 aa	Known RBP	7.52	□□□□□ -1.2
MATR3-231	ENST00000502394	ELOF1	P60002	83 aa	Known RBP	7.52	□□□□□ -1.21
MATR3-231	ENST00000502394	HAMP	P81172	84 aa		7.52	□□□□□ -1.21
MATR3-231	ENST00000502394	REG3G	Q6UW15	175 aa		7.52	□□□□□ -1.21
MATR3-231	ENST00000502394		H0YGX0	51 aa		7.51	□□□□□ -1.21
MATR3-231	ENST00000502394	COX6C	P09669	75 aa		7.51	□□□□□ -1.21
MATR3-231	ENST00000502394	FABP2	P12104	132 aa		7.51	□□□□□ -1.21
MATR3-231	ENST00000502394	FAM218A	Q96MZ4	157 aa		7.51	□□□□□ -1.21
MATR3-231	ENST00000502394	KRTAP9-3	Q9BYQ3	159 aa		7.51	□□□□□ -1.21
MATR3-231	ENST00000502394	RYR1	P21817	5038 aa		7.51	□□□□□ -1.21
MATR3-231	ENST00000502394		B5MCH6	92 aa		7.5	□□□□□ -1.21
MATR3-231	ENST00000502394	LYRM7	Q5U5X0	104 aa		7.5	□□□□□ -1.21
MATR3-231	ENST00000502394	VPS13B	Q7Z7G8	4022 aa		7.49	□□□□□ -1.21
MATR3-231	ENST00000502394		A0A1B0GV90	55 aa		7.49	□□□□□ -1.21
MATR3-231	ENST00000502394	TCL1B	O95988	128 aa		7.49	□□□□□ -1.21
MATR3-231	ENST00000502394	SCGB1C2	P0DMR2	95 aa		7.49	□□□□□ -1.21
MATR3-231	ENST00000502394	COX7B	P24311	80 aa		7.49	□□□□□ -1.21
MATR3-231	ENST00000502394	KRTAP13-1	Q8IUC0	172 aa		7.49	□□□□□ -1.21
MATR3-231	ENST00000502394	CLEC2B	Q92478	149 aa		7.49	□□□□□ -1.21
MATR3-231	ENST00000502394	CDIP1	Q9H305	208 aa		7.49	□□□□□ -1.21
MATR3-231	ENST00000502394	PSORS1C2	Q9UIG4	136 aa		7.49	□□□□□ -1.21
MATR3-231	ENST00000502394	HSPG2	P98160	4391 aa		7.48	□□□□□ -1.21
MATR3-231	ENST00000502394	FAT1	Q14517	4588 aa		7.48	□□□□□ -1.21
MATR3-231	ENST00000502394	LST1	O00453	97 aa		7.48	□□□□□ -1.21
MATR3-231	ENST00000502394	BCE1	O60756	84 aa		7.48	□□□□□ -1.21
MATR3-231	ENST00000502394	VAMP3	Q15836	100 aa		7.48	□□□□□ -1.21
MATR3-231	ENST00000502394	LINC00575	Q6W349	94 aa		7.48	□□□□□ -1.21
MATR3-231	ENST00000502394		Q6ZRX8	168 aa		7.48	□□□□□ -1.21
MATR3-231	ENST00000502394	TRBV20-1	A0A075B6N2	111 aa		7.47	□□□□□ -1.21
MATR3-231	ENST00000502394	ETDC	A0A1B0GVM5	59 aa		7.47	□□□□□ -1.21
MATR3-231	ENST00000502394		A0A1B0GX51	115 aa		7.47	□□□□□ -1.21
MATR3-231	ENST00000502394		H0Y9J4	135 aa		7.47	□□□□□ -1.21
MATR3-231	ENST00000502394		K7EP34	96 aa		7.47	□□□□□ -1.21
MATR3-231	ENST00000502394		Q9BRP9	147 aa		7.47	□□□□□ -1.21
MATR3-231	ENST00000502394	SPCS1	Q9Y6A9	102 aa		7.47	□□□□□ -1.21
MATR3-231	ENST00000502394	KRTAP4-2	Q9BYR5	136 aa		7.46	□□□□□ -1.22
MATR3-231	ENST00000502394	TRAC	P01848	142 aa		7.45	□□□□□ -1.22
MATR3-231	ENST00000502394	INAFM2	P0DMQ5	153 aa		7.45	□□□□□ -1.22
MATR3-231	ENST00000502394	LCE5A	Q5TCM9	118 aa		7.45	□□□□□ -1.22
MATR3-231	ENST00000502394	FAM19A1	Q7Z5A9	133 aa		7.45	□□□□□ -1.22
MATR3-231	ENST00000502394	CDK2AP2	O75956	126 aa		7.44	□□□□□ -1.22
MATR3-231	ENST00000502394	PRLH	P81277	87 aa		7.44	□□□□□ -1.22
MATR3-231	ENST00000502394	ATXN8	Q156A1	80 aa		7.44	□□□□□ -1.22
MATR3-231	ENST00000502394	SMCR5	Q8TEV8	140 aa		7.44	□□□□□ -1.22
MATR3-231	ENST00000502394	C1orf137	Q5JT78	98 aa		7.43	□□□□□ -1.22
MATR3-231	ENST00000502394	KRTAP4-11	Q9BYQ6	195 aa		7.43	□□□□□ -1.22
MATR3-231	ENST00000502394	DHRS4-AS1	Q9P1J3	65 aa		7.43	□□□□□ -1.22
MATR3-231	ENST00000502394	hADV29S1	A0JD25	119 aa		7.42	□□□□□ -1.22
MATR3-231	ENST00000502394		H3BMG7	143 aa		7.42	□□□□□ -1.22
MATR3-231	ENST00000502394	ERC2-IT1	O76042	136 aa		7.41	□□□□□ -1.22
MATR3-231	ENST00000502394	IGLV7-43	P04211	117 aa		7.41	□□□□□ -1.22
MATR3-231	ENST00000502394	UBE2A	P49459	152 aa		7.41	□□□□□ -1.22
MATR3-231	ENST00000502394	GTF2H5	Q6ZYL4	71 aa		7.41	□□□□□ -1.22
MATR3-231	ENST00000502394	BIRC6	Q9NR09	4857 aa		7.4	□□□□□ -1.22
MATR3-231	ENST00000502394	ZNF861P	O60384	105 aa		7.4	□□□□□ -1.22
MATR3-231	ENST00000502394	KRTAP10-4	P60372	401 aa	Predicted RBP	7.4	□□□□□ -1.22
MATR3-231	ENST00000502394	PRO0461	Q9UI25	63 aa		7.4	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms