RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 KLK12Q9UKR0 248 aa5.93□□□□□ -1.46
FN1-227ENST00000498719 KLK5Q9Y337 293 aaPredicted RBP5.93□□□□□ -1.46
FN1-227ENST00000498719 NOTCH1P46531 2555 aa5.93□□□□□ -1.46
FN1-227ENST00000498719 LINC01554Q52M75 96 aa5.91□□□□□ -1.46
FN1-227ENST00000498719 Q8N814 137 aa5.91□□□□□ -1.46
FN1-227ENST00000498719 FLNBO75369 2602 aaKnown RBP5.91□□□□□ -1.46
FN1-227ENST00000498719 F8P00451 2351 aa5.91□□□□□ -1.46
FN1-227ENST00000498719 IGKV3D-7A0A0C4DH55 119 aa5.91□□□□□ -1.46
FN1-227ENST00000498719 EPM2AB3EWF7 344 aa5.91□□□□□ -1.46
FN1-227ENST00000498719 CXCL5P42830 114 aa5.91□□□□□ -1.46
FN1-227ENST00000498719 SPAG11BQ08648 103 aa5.91□□□□□ -1.46
FN1-227ENST00000498719 COX17Q14061 63 aa5.91□□□□□ -1.46
FN1-227ENST00000498719 CYSRT1A8MQ03 144 aa5.9□□□□□ -1.46
FN1-227ENST00000498719 SPART-AS1P0CW21 52 aa5.9□□□□□ -1.46
FN1-227ENST00000498719 MIFP14174 115 aa5.9□□□□□ -1.46
FN1-227ENST00000498719 SCXQ7RTU7 201 aa5.9□□□□□ -1.46
FN1-227ENST00000498719 MAST4O15021 2626 aa5.9□□□□□ -1.46
FN1-227ENST00000498719 CASC10Q5T4H9 136 aa5.9□□□□□ -1.47
FN1-227ENST00000498719 C9orf153Q5TBE3 101 aa5.9□□□□□ -1.47
FN1-227ENST00000498719 LELP1Q5T871 98 aa5.89□□□□□ -1.47
FN1-227ENST00000498719 ENHOQ6UWT2 76 aa5.89□□□□□ -1.47
FN1-227ENST00000498719 ADM2Q7Z4H4 148 aa5.89□□□□□ -1.47
FN1-227ENST00000498719 IGLV8-61A0A075B6I0 122 aa5.89□□□□□ -1.47
FN1-227ENST00000498719 S100A7L2Q5SY68 101 aa5.89□□□□□ -1.47
FN1-227ENST00000498719 LINC00167Q96N53 147 aa5.89□□□□□ -1.47
FN1-227ENST00000498719 A0A087WVE0 104 aa5.88□□□□□ -1.47
FN1-227ENST00000498719 PHF5AQ7RTV0 110 aaKnown RBP5.88□□□□□ -1.47
FN1-227ENST00000498719 C7orf33Q8WU49 177 aa5.88□□□□□ -1.47
FN1-227ENST00000498719 CMYA5Q8N3K9 4069 aa5.88□□□□□ -1.47
FN1-227ENST00000498719 XAGE1AQ9HD64 81 aa5.88□□□□□ -1.47
FN1-227ENST00000498719 PRR34Q9NV39 138 aa5.88□□□□□ -1.47
FN1-227ENST00000498719 LYPD5Q6UWN5 251 aa5.87□□□□□ -1.47
FN1-227ENST00000498719 Q8NBF4 154 aa5.87□□□□□ -1.47
FN1-227ENST00000498719 WFDC10BQ8IUB3 73 aa5.87□□□□□ -1.47
FN1-227ENST00000498719 C8orf17Q9NRJ1 99 aa5.87□□□□□ -1.47
FN1-227ENST00000498719 CCKP06307 115 aa5.86□□□□□ -1.47
FN1-227ENST00000498719 UBE2BP63146 152 aa5.86□□□□□ -1.47
FN1-227ENST00000498719 A0A087X002 238 aa5.86□□□□□ -1.47
FN1-227ENST00000498719 A0A0J9YWU9 116 aa5.86□□□□□ -1.47
FN1-227ENST00000498719 HIGD2BQ4VC39 106 aa5.86□□□□□ -1.47
FN1-227ENST00000498719 LINC00575Q6W349 94 aa5.86□□□□□ -1.47
FN1-227ENST00000498719 C6orf48Q9UBA6 75 aa5.86□□□□□ -1.47
FN1-227ENST00000498719 LINC00588Q9Y4M8 146 aa5.86□□□□□ -1.47
FN1-227ENST00000498719 NBEAL1Q6ZS30 2694 aa5.86□□□□□ -1.47
FN1-227ENST00000498719 WFDC9Q8NEX5 89 aa5.85□□□□□ -1.47
FN1-227ENST00000498719 HIST1H4AP62805 103 aaKnown RBP5.85□□□□□ -1.47
FN1-227ENST00000498719 TRBV10-3A0A0K0K1G6 114 aa5.84□□□□□ -1.47
FN1-227ENST00000498719 IGLV6-57P01721 117 aa5.84□□□□□ -1.47
FN1-227ENST00000498719 Q6JHZ5 121 aa5.84□□□□□ -1.47
FN1-227ENST00000498719 hADV29S1A0JD25 119 aa5.84□□□□□ -1.48
FN1-227ENST00000498719 JMJD7-PLA2G4BH0Y9G9 81 aa5.84□□□□□ -1.48
FN1-227ENST00000498719 KPRPQ5T749 579 aaPredicted RBP5.84□□□□□ -1.48
FN1-227ENST00000498719 Q6ZTC4 211 aa5.84□□□□□ -1.48
FN1-227ENST00000498719 M0R2N4 97 aa5.83□□□□□ -1.48
FN1-227ENST00000498719 UQCRQO14949 82 aa5.83□□□□□ -1.48
FN1-227ENST00000498719 KRTAP10-11P60412 298 aa5.83□□□□□ -1.48
FN1-227ENST00000498719 B9D2Q9BPU9 175 aa5.83□□□□□ -1.48
FN1-227ENST00000498719 Q6ZQY7 126 aa5.83□□□□□ -1.48
FN1-227ENST00000498719 BAHCC1Q9P281 2608 aa5.83□□□□□ -1.48
FN1-227ENST00000498719 CYSTM1Q9H1C7 97 aa5.82□□□□□ -1.48
FN1-227ENST00000498719 COL6A5A8TX70 2615 aa5.81□□□□□ -1.48
FN1-227ENST00000498719 COX7CP15954 63 aa5.81□□□□□ -1.48
FN1-227ENST00000498719 CAMK2N2Q96S95 79 aa5.81□□□□□ -1.48
FN1-227ENST00000498719 TRAV23DV6A0A075B6W5 121 aa5.8□□□□□ -1.48
FN1-227ENST00000498719 GVQW2A0A096LPI5 108 aaPredicted RBP5.8□□□□□ -1.48
FN1-227ENST00000498719 ATOX1O00244 68 aa5.8□□□□□ -1.48
FN1-227ENST00000498719 RBM3P98179 157 aaKnown RBP5.8□□□□□ -1.48
FN1-227ENST00000498719 KRTAP26-1Q6PEX3 210 aa5.8□□□□□ -1.48
FN1-227ENST00000498719 ESRGQ1W209 222 aa5.8□□□□□ -1.48
FN1-227ENST00000498719 Q6ZQT0 140 aa5.8□□□□□ -1.48
FN1-227ENST00000498719 DSCR8Q96T75 97 aa5.8□□□□□ -1.48
FN1-227ENST00000498719 CRYGAP11844 174 aa5.79□□□□□ -1.48
FN1-227ENST00000498719 LUZP6Q538Z0 58 aa5.79□□□□□ -1.48
FN1-227ENST00000498719 C15orf56Q8N910 161 aa5.79□□□□□ -1.48
FN1-227ENST00000498719 MUC7Q8TAX7 377 aa5.79□□□□□ -1.48
FN1-227ENST00000498719 LYSTQ99698 3801 aa5.79□□□□□ -1.48
FN1-227ENST00000498719 DIRC1Q969H9 104 aa5.78□□□□□ -1.48
FN1-227ENST00000498719 C7orf65Q6ZTY9 151 aa5.78□□□□□ -1.48
FN1-227ENST00000498719 DNAH3Q8TD57 4116 aa5.78□□□□□ -1.48
FN1-227ENST00000498719 UBL5Q9BZL1 73 aa5.77□□□□□ -1.49
FN1-227ENST00000498719 IGKV2D-24A0A075B6R9 120 aa5.76□□□□□ -1.49
FN1-227ENST00000498719 FP248Q71RG6 208 aaPredicted RBP5.76□□□□□ -1.49
FN1-227ENST00000498719 SMIM29Q86T20 159 aa5.76□□□□□ -1.49
FN1-227ENST00000498719 COX7BP24311 80 aa5.76□□□□□ -1.49
FN1-227ENST00000498719 SERP2Q8N6R1 65 aa5.76□□□□□ -1.49
FN1-227ENST00000498719 LOC110117498A0A087WWA1 95 aa5.75□□□□□ -1.49
FN1-227ENST00000498719 H3BNG1 76 aa5.75□□□□□ -1.49
FN1-227ENST00000498719 ELOF1P60002 83 aaKnown RBP5.75□□□□□ -1.49
FN1-227ENST00000498719 SERP1Q9Y6X1 66 aa5.75□□□□□ -1.49
FN1-227ENST00000498719 DEFB131BA0A096LNP1 70 aa5.75□□□□□ -1.49
FN1-227ENST00000498719 UPK3BQ9BT76 320 aa5.75□□□□□ -1.49
FN1-227ENST00000498719 HAMPP81172 84 aa5.74□□□□□ -1.49
FN1-227ENST00000498719 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
FN1-227ENST00000498719 KRTAP24-1Q3LI83 254 aa5.74□□□□□ -1.49
FN1-227ENST00000498719 ATP5EP2Q5VTU8 51 aa5.74□□□□□ -1.49
FN1-227ENST00000498719 COL7A1Q02388 2944 aa5.73□□□□□ -1.49
FN1-227ENST00000498719 MGAM2Q2M2H8 2515 aa5.73□□□□□ -1.49
FN1-227ENST00000498719 TENM2Q9NT68 2774 aa5.73□□□□□ -1.49
FN1-227ENST00000498719 PRB2P02812 416 aaPredicted RBP5.73□□□□□ -1.49
FN1-227ENST00000498719 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms