RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 PRH1P02810 166 aa2.96□□□□□ -1.94
BRCA1-224ENST00000497488 CCKP06307 115 aa2.96□□□□□ -1.94
BRCA1-224ENST00000497488 WNK1Q9H4A3 2382 aa2.96□□□□□ -1.94
BRCA1-224ENST00000497488 TRAV12-3A0A0B4J271 114 aa2.95□□□□□ -1.94
BRCA1-224ENST00000497488 HCG22E2RYF7 251 aa2.95□□□□□ -1.94
BRCA1-224ENST00000497488 TMEM167AQ8TBQ9 72 aa2.95□□□□□ -1.94
BRCA1-224ENST00000497488 TRAV13-2A0A0B4J235 113 aa2.94□□□□□ -1.94
BRCA1-224ENST00000497488 SMIM31A0A1B0GVY4 71 aa2.94□□□□□ -1.94
BRCA1-224ENST00000497488 IGLC1P0CG04 106 aa2.94□□□□□ -1.94
BRCA1-224ENST00000497488 PDE6GP18545 87 aa2.94□□□□□ -1.94
BRCA1-224ENST00000497488 C15orf53Q8NAA6 179 aa2.94□□□□□ -1.94
BRCA1-224ENST00000497488 SMIM4Q8WVI0 70 aa2.94□□□□□ -1.94
BRCA1-224ENST00000497488 HUWE1Q7Z6Z7 4374 aaKnown RBP2.94□□□□□ -1.94
BRCA1-224ENST00000497488 IGLC7A0M8Q6 106 aa2.93□□□□□ -1.94
BRCA1-224ENST00000497488 H3BUA1 57 aa2.93□□□□□ -1.94
BRCA1-224ENST00000497488 KRTAP10-8P60410 259 aa2.93□□□□□ -1.94
BRCA1-224ENST00000497488 WT1-ASQ06250 92 aa2.93□□□□□ -1.94
BRCA1-224ENST00000497488 Q0VG73 95 aa2.93□□□□□ -1.94
BRCA1-224ENST00000497488 BET1LQ9NYM9 111 aa2.93□□□□□ -1.94
BRCA1-224ENST00000497488 LINC00474Q9P2X8 69 aa2.93□□□□□ -1.94
BRCA1-224ENST00000497488 V9GYH0 126 aa2.93□□□□□ -1.94
BRCA1-224ENST00000497488 NOTCH1P46531 2555 aa2.92□□□□□ -1.94
BRCA1-224ENST00000497488 FAM223BA6NKX1 122 aa2.92□□□□□ -1.94
BRCA1-224ENST00000497488 INE1O15225 51 aa2.92□□□□□ -1.94
BRCA1-224ENST00000497488 KLK9Q2XQG4 91 aa2.92□□□□□ -1.94
BRCA1-224ENST00000497488 SPINK9Q5DT21 86 aa2.92□□□□□ -1.94
BRCA1-224ENST00000497488 FAM223AQ8IWN6 122 aa2.92□□□□□ -1.94
BRCA1-224ENST00000497488 USMG5Q96IX5 58 aa2.92□□□□□ -1.94
BRCA1-224ENST00000497488 PRO1933Q9H354 126 aa2.92□□□□□ -1.94
BRCA1-224ENST00000497488 NDUFA4L2Q9NRX3 87 aa2.92□□□□□ -1.94
BRCA1-224ENST00000497488 TMEM14BQ9NUH8 114 aa2.92□□□□□ -1.94
BRCA1-224ENST00000497488 RYR3Q15413 4870 aa2.92□□□□□ -1.94
BRCA1-224ENST00000497488 K7EIM0 57 aa2.91□□□□□ -1.94
BRCA1-224ENST00000497488 SIX6O95475 246 aa2.91□□□□□ -1.94
BRCA1-224ENST00000497488 TRAPPC2P0DI81 140 aa2.91□□□□□ -1.94
BRCA1-224ENST00000497488 TRAPPC2BP0DI82 140 aa2.91□□□□□ -1.94
BRCA1-224ENST00000497488 DEFB121Q5J5C9 76 aa2.91□□□□□ -1.94
BRCA1-224ENST00000497488 PYY3Q5JQD4 70 aa2.91□□□□□ -1.94
BRCA1-224ENST00000497488 CYP4F30PQ9H0H9 118 aa2.91□□□□□ -1.94
BRCA1-224ENST00000497488 WFDC10AQ9H1F0 79 aa2.91□□□□□ -1.94
BRCA1-224ENST00000497488 TMEM14CQ9P0S9 112 aa2.91□□□□□ -1.94
BRCA1-224ENST00000497488 KMT2CQ8NEZ4 4911 aaKnown RBP2.91□□□□□ -1.94
BRCA1-224ENST00000497488 CRYM-AS1A6NIL9 109 aa2.9□□□□□ -1.95
BRCA1-224ENST00000497488 M0R2N4 97 aa2.9□□□□□ -1.95
BRCA1-224ENST00000497488 DNAL4O96015 105 aa2.9□□□□□ -1.95
BRCA1-224ENST00000497488 KRTAP12-2P59991 146 aa2.9□□□□□ -1.95
BRCA1-224ENST00000497488 PRCDQ00LT1 54 aa2.9□□□□□ -1.95
BRCA1-224ENST00000497488 SSBP1Q04837 148 aaKnown RBP2.9□□□□□ -1.95
BRCA1-224ENST00000497488 RYR2Q92736 4967 aa2.89□□□□□ -1.95
BRCA1-224ENST00000497488 hADV29S1A0JD25 119 aa2.89□□□□□ -1.95
BRCA1-224ENST00000497488 I3L2K1 104 aa2.89□□□□□ -1.95
BRCA1-224ENST00000497488 LINC00322Q6ZN03 302 aaPredicted RBP2.89□□□□□ -1.95
BRCA1-224ENST00000497488 TOMM5Q8N4H5 51 aa2.89□□□□□ -1.95
BRCA1-224ENST00000497488 TNCP24821 2201 aa2.89□□□□□ -1.95
BRCA1-224ENST00000497488 COL7A1Q02388 2944 aa2.89□□□□□ -1.95
BRCA1-224ENST00000497488 TGP01266 2768 aa2.88□□□□□ -1.95
BRCA1-224ENST00000497488 TRAV23DV6A0A075B6W5 121 aa2.88□□□□□ -1.95
BRCA1-224ENST00000497488 TRBV7-1A0A0A6YYK4 115 aa2.88□□□□□ -1.95
BRCA1-224ENST00000497488 HIGD1CA8MV81 97 aa2.88□□□□□ -1.95
BRCA1-224ENST00000497488 UBE2D1P51668 147 aa2.88□□□□□ -1.95
BRCA1-224ENST00000497488 DEFB114Q30KQ6 69 aa2.88□□□□□ -1.95
BRCA1-224ENST00000497488 NMSQ5H8A3 153 aa2.88□□□□□ -1.95
BRCA1-224ENST00000497488 NPVFQ9HCQ7 196 aa2.88□□□□□ -1.95
BRCA1-224ENST00000497488 HYDINQ4G0P3 5121 aa2.88□□□□□ -1.95
BRCA1-224ENST00000497488 SACSQ9NZJ4 4579 aa2.87□□□□□ -1.95
BRCA1-224ENST00000497488 SFT2D2O95562 160 aa2.87□□□□□ -1.95
BRCA1-224ENST00000497488 FAUP35544 74 aaKnown RBP2.87□□□□□ -1.95
BRCA1-224ENST00000497488 PMCHL2Q9BQD1 86 aa2.87□□□□□ -1.95
BRCA1-224ENST00000497488 STARD9Q9P2P6 4700 aa2.86□□□□□ -1.95
BRCA1-224ENST00000497488 TRGV2A0A075B6R0 118 aa2.86□□□□□ -1.95
BRCA1-224ENST00000497488 LOC110117498A0A087WWA1 95 aa2.86□□□□□ -1.95
BRCA1-224ENST00000497488 CEBPZOSA8MTT3 80 aa2.86□□□□□ -1.95
BRCA1-224ENST00000497488 NDUFA4O00483 81 aa2.86□□□□□ -1.95
BRCA1-224ENST00000497488 IGKV4-1P06312 121 aa2.86□□□□□ -1.95
BRCA1-224ENST00000497488 IAPPP10997 89 aa2.86□□□□□ -1.95
BRCA1-224ENST00000497488 KRTDAPP60985 99 aa2.86□□□□□ -1.95
BRCA1-224ENST00000497488 CYP2G1PQ6ZSU1 146 aa2.86□□□□□ -1.95
BRCA1-224ENST00000497488 MED9Q9NWA0 146 aa2.86□□□□□ -1.95
BRCA1-224ENST00000497488 NAP1L6A6NFF2 107 aa2.85□□□□□ -1.95
BRCA1-224ENST00000497488 KRTAP10-1P60331 282 aa2.85□□□□□ -1.95
BRCA1-224ENST00000497488 ZNF625Q96I27 306 aaPredicted RBP2.85□□□□□ -1.95
BRCA1-224ENST00000497488 RHPN1-AS1Q9BWJ2 59 aa2.85□□□□□ -1.95
BRCA1-224ENST00000497488 PLECQ15149 4684 aaKnown RBP2.85□□□□□ -1.95
BRCA1-224ENST00000497488 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
BRCA1-224ENST00000497488 ASIPP42127 132 aa2.84□□□□□ -1.95
BRCA1-224ENST00000497488 KRTAP13-3Q3SY46 172 aa2.84□□□□□ -1.95
BRCA1-224ENST00000497488 SPATA45Q537H7 98 aa2.84□□□□□ -1.95
BRCA1-224ENST00000497488 FAM213BQ8TBF2 198 aa2.84□□□□□ -1.95
BRCA1-224ENST00000497488 SNURFQ9Y675 71 aa2.84□□□□□ -1.95
BRCA1-224ENST00000497488 TEX49A0A1B0GTD5 131 aa2.83□□□□□ -1.96
BRCA1-224ENST00000497488 LOC101927531A0A1B0GV80 90 aa2.83□□□□□ -1.96
BRCA1-224ENST00000497488 RPL37AP61513 92 aaKnown RBP2.83□□□□□ -1.96
BRCA1-224ENST00000497488 KRTAP13-4Q3LI77 160 aa2.83□□□□□ -1.96
BRCA1-224ENST00000497488 PRO0461Q9UI25 63 aa2.83□□□□□ -1.96
BRCA1-224ENST00000497488 EPPK1P58107 5090 aaKnown RBP2.82□□□□□ -1.96
BRCA1-224ENST00000497488 TENM3Q9P273 2699 aa2.82□□□□□ -1.96
BRCA1-224ENST00000497488 DYNC2H1Q8NCM8 4307 aaKnown RBP2.82□□□□□ -1.96
BRCA1-224ENST00000497488 DEFB131AP59861 70 aa2.82□□□□□ -1.96
BRCA1-224ENST00000497488 DEFB1P60022 68 aa2.82□□□□□ -1.96
BRCA1-224ENST00000497488 SEC11AP67812 179 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms