RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 EIF4EBP3O60516 100 aaPredicted RBP11.49□□□□□ -0.57
CTDSP1-213ENST00000496785 TRAV23DV6A0A075B6W5 121 aa11.48□□□□□ -0.57
CTDSP1-213ENST00000496785 FAM229BQ4G0N7 80 aa11.48□□□□□ -0.57
CTDSP1-213ENST00000496785 ZNF706Q9Y5V0 76 aaPredicted RBP11.48□□□□□ -0.57
CTDSP1-213ENST00000496785 KRTAP4-16G5E9R7 235 aaPredicted RBP11.47□□□□□ -0.57
CTDSP1-213ENST00000496785 HINT1P49773 126 aaPredicted RBP11.46□□□□□ -0.57
CTDSP1-213ENST00000496785 OR13C6PQ8NH95 151 aa11.46□□□□□ -0.57
CTDSP1-213ENST00000496785 JOSD1Q15040 202 aaPredicted RBP11.45□□□□□ -0.58
CTDSP1-213ENST00000496785 ZNF73O43830 326 aaPredicted RBP11.44□□□□□ -0.58
CTDSP1-213ENST00000496785 B5MCH6 92 aa11.43□□□□□ -0.58
CTDSP1-213ENST00000496785 TNXBP22105 4242 aa11.42□□□□□ -0.58
CTDSP1-213ENST00000496785 Q6ZRX8 168 aa11.42□□□□□ -0.58
CTDSP1-213ENST00000496785 TYMSOSQ8TAI1 123 aa11.42□□□□□ -0.58
CTDSP1-213ENST00000496785 A0A087X002 238 aa11.41□□□□□ -0.58
CTDSP1-213ENST00000496785 MUSTN1Q8IVN3 82 aa11.4□□□□□ -0.58
CTDSP1-213ENST00000496785 SMCR5Q8TEV8 140 aa11.4□□□□□ -0.58
CTDSP1-213ENST00000496785 SPRR4Q96PI1 79 aa11.4□□□□□ -0.58
CTDSP1-213ENST00000496785 ANAPC11Q9NYG5 84 aa11.39□□□□□ -0.59
CTDSP1-213ENST00000496785 COX8AP10176 69 aa11.37□□□□□ -0.59
CTDSP1-213ENST00000496785 TRAV13-2A0A0B4J235 113 aa11.35□□□□□ -0.59
CTDSP1-213ENST00000496785 VAMP8Q9BV40 100 aa11.35□□□□□ -0.59
CTDSP1-213ENST00000496785 A6NDN8 102 aa11.34□□□□□ -0.59
CTDSP1-213ENST00000496785 DLEU1O43261 78 aa11.34□□□□□ -0.59
CTDSP1-213ENST00000496785 KRTAP13-2Q52LG2 175 aa11.34□□□□□ -0.59
CTDSP1-213ENST00000496785 Q9BRP9 147 aa11.34□□□□□ -0.59
CTDSP1-213ENST00000496785 PAM16Q9Y3D7 125 aa11.33□□□□□ -0.6
CTDSP1-213ENST00000496785 SPATA45Q537H7 98 aa11.32□□□□□ -0.6
CTDSP1-213ENST00000496785 DHRS4-AS1Q9P1J3 65 aa11.32□□□□□ -0.6
CTDSP1-213ENST00000496785 HMCN2Q8NDA2 5059 aa11.31□□□□□ -0.6
CTDSP1-213ENST00000496785 C6orf99Q4VX62 202 aa11.31□□□□□ -0.6
CTDSP1-213ENST00000496785 TMA7Q9Y2S6 64 aaKnown RBP11.31□□□□□ -0.6
CTDSP1-213ENST00000496785 TRBV7-6A0A0J9YX20 115 aa11.3□□□□□ -0.6
CTDSP1-213ENST00000496785 COX7BP24311 80 aa11.3□□□□□ -0.6
CTDSP1-213ENST00000496785 LINC00483Q53H64 154 aa11.3□□□□□ -0.6
CTDSP1-213ENST00000496785 GAGE2AQ6NT46 116 aa11.3□□□□□ -0.6
CTDSP1-213ENST00000496785 HIST1H4GQ99525 98 aa11.3□□□□□ -0.6
CTDSP1-213ENST00000496785 ERC2-IT1O76042 136 aa11.29□□□□□ -0.6
CTDSP1-213ENST00000496785 ELOF1P60002 83 aaKnown RBP11.29□□□□□ -0.6
CTDSP1-213ENST00000496785 CTAG1AP78358 180 aa11.29□□□□□ -0.6
CTDSP1-213ENST00000496785 LINC00304Q8N9R0 145 aa11.29□□□□□ -0.6
CTDSP1-213ENST00000496785 SLC25A34Q6PIV7 304 aa11.28□□□□□ -0.6
CTDSP1-213ENST00000496785 A0A1B0GWB2 263 aa11.27□□□□□ -0.61
CTDSP1-213ENST00000496785 C14orf144Q96I85 54 aa11.27□□□□□ -0.61
CTDSP1-213ENST00000496785 A4D1N5 150 aa11.26□□□□□ -0.61
CTDSP1-213ENST00000496785 C3orf22Q8N5N4 141 aa11.26□□□□□ -0.61
CTDSP1-213ENST00000496785 HIGD1BQ9P298 99 aa11.25□□□□□ -0.61
CTDSP1-213ENST00000496785 SPAG11AQ6PDA7 123 aa11.24□□□□□ -0.61
CTDSP1-213ENST00000496785 TSPAN13O95857 204 aa11.23□□□□□ -0.61
CTDSP1-213ENST00000496785 VAMP3Q15836 100 aa11.22□□□□□ -0.61
CTDSP1-213ENST00000496785 C4orf48Q5BLP8 95 aa11.22□□□□□ -0.61
CTDSP1-213ENST00000496785 PYY3Q5JQD4 70 aa11.22□□□□□ -0.61
CTDSP1-213ENST00000496785 NHP2Q9NX24 153 aaKnown RBP11.22□□□□□ -0.61
CTDSP1-213ENST00000496785 SMIM11BQ8TCY0 68 aa11.21□□□□□ -0.61
CTDSP1-213ENST00000496785 IGLV9-49A0A0B4J1Y8 123 aa11.19□□□□□ -0.62
CTDSP1-213ENST00000496785 SSBP3-AS1Q7Z2R9 100 aa11.19□□□□□ -0.62
CTDSP1-213ENST00000496785 ST20-AS1Q8NBB2 130 aa11.19□□□□□ -0.62
CTDSP1-213ENST00000496785 MOBPQ13875 183 aa11.18□□□□□ -0.62
CTDSP1-213ENST00000496785 TAL2Q16559 108 aa11.18□□□□□ -0.62
CTDSP1-213ENST00000496785 SPRR1BP22528 89 aa11.17□□□□□ -0.62
CTDSP1-213ENST00000496785 Q8NBF4 154 aa11.17□□□□□ -0.62
CTDSP1-213ENST00000496785 SLC25A20O43772 301 aa11.16□□□□□ -0.62
CTDSP1-213ENST00000496785 PRR4Q16378 134 aa11.16□□□□□ -0.62
CTDSP1-213ENST00000496785 C2orf91Q6ZV80 131 aa11.16□□□□□ -0.62
CTDSP1-213ENST00000496785 TMEM238LA0A1B0GVL6 79 aa11.15□□□□□ -0.62
CTDSP1-213ENST00000496785 A6NJY4 79 aa11.15□□□□□ -0.62
CTDSP1-213ENST00000496785 C9orf153Q5TBE3 101 aa11.15□□□□□ -0.62
CTDSP1-213ENST00000496785 C12orf57Q99622 126 aa11.15□□□□□ -0.62
CTDSP1-213ENST00000496785 RAB37Q96AX2 223 aa11.14□□□□□ -0.63
CTDSP1-213ENST00000496785 LAMTOR3Q9UHA4 124 aa11.14□□□□□ -0.63
CTDSP1-213ENST00000496785 TEX49A0A1B0GTD5 131 aa11.13□□□□□ -0.63
CTDSP1-213ENST00000496785 SPINK1P00995 79 aa11.13□□□□□ -0.63
CTDSP1-213ENST00000496785 BVES-AS1Q5T3Y7 98 aa11.12□□□□□ -0.63
CTDSP1-213ENST00000496785 A0A0B4J2C4 111 aa11.11□□□□□ -0.63
CTDSP1-213ENST00000496785 CEND1Q8N111 149 aa11.11□□□□□ -0.63
CTDSP1-213ENST00000496785 CFC1BP0CG36 223 aa11.1□□□□□ -0.63
CTDSP1-213ENST00000496785 CFC1P0CG37 223 aa11.1□□□□□ -0.63
CTDSP1-213ENST00000496785 DEFB105AQ8NG35 78 aa11.1□□□□□ -0.63
CTDSP1-213ENST00000496785 IGLV5-48A0A075B6I7 105 aa11.08□□□□□ -0.64
CTDSP1-213ENST00000496785 RPS29P62273 56 aaKnown RBP11.08□□□□□ -0.64
CTDSP1-213ENST00000496785 LINC00575Q6W349 94 aa11.08□□□□□ -0.64
CTDSP1-213ENST00000496785 UQCR10Q9UDW1 63 aa11.07□□□□□ -0.64
CTDSP1-213ENST00000496785 hADV29S1A0JD25 119 aa11.06□□□□□ -0.64
CTDSP1-213ENST00000496785 HSD52Q0P140 79 aa11.06□□□□□ -0.64
CTDSP1-213ENST00000496785 H7C2G1 150 aa11.05□□□□□ -0.64
CTDSP1-213ENST00000496785 SNCGO76070 127 aa11.04□□□□□ -0.64
CTDSP1-213ENST00000496785 Q1RN00 199 aa11.04□□□□□ -0.64
CTDSP1-213ENST00000496785 RETNLBQ9BQ08 111 aa11.04□□□□□ -0.64
CTDSP1-213ENST00000496785 PRO1854Q9UHT4 67 aa11.03□□□□□ -0.64
CTDSP1-213ENST00000496785 H0YGX0 51 aa11.02□□□□□ -0.65
CTDSP1-213ENST00000496785 LINC01547P58512 204 aaPredicted RBP11.02□□□□□ -0.65
CTDSP1-213ENST00000496785 FXYD2P54710 66 aa11.01□□□□□ -0.65
CTDSP1-213ENST00000496785 Q6ZQY7 126 aa11.01□□□□□ -0.65
CTDSP1-213ENST00000496785 FP248Q71RG6 208 aaPredicted RBP11.01□□□□□ -0.65
CTDSP1-213ENST00000496785 PRO1933Q9H354 126 aa11.01□□□□□ -0.65
CTDSP1-213ENST00000496785 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11□□□□□ -0.65
CTDSP1-213ENST00000496785 UBR4Q5T4S7 5183 aa10.99□□□□□ -0.65
CTDSP1-213ENST00000496785 F8WEM9 126 aa10.99□□□□□ -0.65
CTDSP1-213ENST00000496785 Q8N377 158 aa10.99□□□□□ -0.65
CTDSP1-213ENST00000496785 LRP2P98164 4655 aa10.99□□□□□ -0.65
CTDSP1-213ENST00000496785 IGLV7-46A0A075B6I9 117 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms